Granulibacter bethesdensis NIH3.1: GbCGDNIH3_0416
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Entry
GbCGDNIH3_0416 CDS
T03155
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GbCGDNIH3_0416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbc03400
]
GbCGDNIH3_0416
DNA repair and recombination proteins [BR:
gbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GbCGDNIH3_0416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_30
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AHJ62184
LinkDB
All DBs
Position
complement(471880..474678)
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AA seq
932 aa
AA seq
DB search
MLRPLCMLAETMGAITLHCMSVASTPTRRGRPPGSNAARASNGAGSETAAAIPAGATPAM
AQWFVLKNQHPDALLFFRMGDFYELFFQDAENAAATLDIQLTKRGLHEGEPIPMCGVPVH
AAEMYLSRLIRRGWRVAIVEQMENPKNRAGKGPIRRDVVRLVTPGTITEETLLDAGRPNL
LLAIAQSGNHLGAAWLDISTGLFETESLDESGLTALLGRLDPAEILCPSSLHLEIWDARR
GPEQPVSDPANARARLAEAYDVSHINVFGSFTDAEAMAAMQALDYVRDAQMGALPRLGHP
VPVGEAGRLAMDASTRASLEIDRARDGGTERTLLSAVQRTLTPAGGRMLAAWLGAPLTDR
TVITARQDGWGWLLEQPTLSMRLRETLRGCPDMARALGRIALGRGTPRDLAAIRDGAHIA
MEAAGLLEGILPSALAELHAALHLPPDLPEMLEAALADPVPARIEDGGVIASGFDGELDA
ERGLRDDSRKVIAALQTEYAQRYGVASLKIRHHAQLGYMIEVPAVAVETLRTVPELILRQ
GMANGARFTHPDLSELDRRITEAAERARQREMIVITALRQKVEAHSSSIAACAEALARLD
VLQSAARLAENGTWCRPVMTDDQTLTIEAGRHPVVEAALEGGPTPFMPNDTDLSASRRVM
LLTGPNMAGKSTYLRQNALIVILAQAGLPVPARAAHIGIVDRLFSRVGASDDLARGQSTF
MVEMTETAAILHQAGPRSLVVVDEIGRGTSTLDGLAIAWAVLEALHSRIGARTIFATHFH
ELARLQGELPMLRPYTMKVQEWRGKVVFLHEVAEGAGGRSWGVHVAKLAGVPAATVRRAG
QLLTALEERSAGLTDNATLPLFAASHGNETETEPAEGIHEAKPASLPQELIEALGQMEPD
KLTPREALDLIYHFKSMLSSQAHNGDVEAESW
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgctccgccctctctgcatgctggccgaaacaatgggagccattacactgcattgcatg
tccgttgcatcgactcccacacgccggggccgtcctcccggaagcaatgccgcccgtgcc
tccaacggggccggcagtgaaacggctgccgccattccggcaggcgccacacccgccatg
gcgcaatggttcgtcctgaaaaaccagcatcccgatgcgctgctgtttttccgcatgggc
gatttctacgaactgttttttcaggatgcggaaaatgcagccgccacgctggatattcag
ctgacgaagcgcggactgcatgaaggcgaaccgattcccatgtgtggcgtgccggtccat
gccgccgagatgtatctgtcccgactgatccgccgcggttggcgggttgccattgtcgag
cagatggaaaaccccaaaaaccgcgccgggaagggcccgatccgccgcgatgtcgtacgt
ctggtcacccccggtaccattaccgaggaaactttgctggatgcgggccgtcccaatctg
ctgctggccattgcgcagtccgggaatcatctgggggcagcctggctggatatctccacc
gggctgttcgagacggaatcgctggacgaatccggcctgaccgctctgctgggccggctc
gatccggcggaaattctctgcccctcttccctgcatctggaaatatgggatgcacggcgc
ggaccggaacaaccggtcagcgacccggccaatgcaagggcacgactcgctgaagcatac
gatgtcagccatatcaacgtattcggcagctttaccgatgccgaggccatggcggctatg
caggcgctggattacgtgcgggatgcacagatgggggctttgcctcgcctcggtcatccc
gtaccggtgggcgaggccgggcgactggccatggatgcctccacccgcgccagtctggag
atcgaccgcgcccgcgatggcggcaccgaacgcacgttgctgtccgctgttcagcgcacc
ctgaccccggctggcggcagaatgctcgccgcatggctgggtgctcccttgaccgaccga
acagtcatcaccgcccgacaggatggatggggctggctgctggaacagccaactctgtcc
atgcgcctgcgggaaacactgcgtggctgccccgatatggcccgcgcactggggcgtatc
gcgctgggacgcggcacgcctcgcgatctggccgccattcgagatggcgcacacattgcc
atggaggccgccggattgctggaaggcatcctgccctccgcactggctgaattgcacgcc
gccctgcatctgccgcccgatctgccggagatgctggaggcggcgctcgcggatccagta
cccgctcgcatcgaggatggcggcgtgatcgccagcggcttcgacggtgaactggatgcc
gaacgcgggctgcgggatgacagccgcaaggtcatcgccgcacttcagaccgaatacgcc
caacgttatggcgtcgccagcctcaagatccgtcatcacgcacagctcggctatatgatc
gaggtgcctgccgtcgcggtggaaacactgcggacggtgccggagttgatcctgcggcaa
ggcatggccaacggggcacgctttacccatccggacctgtcggagctggaccgccgcatt
accgaggccgccgaacgcgcccgacaacgggaaatgatcgtcatcaccgccctgcggcaa
aaggtggaggcccattccagttccatcgccgcctgcgccgaagcgctggcccgtctggac
gtgctgcaatccgctgcccgtctggcggaaaacggcacatggtgccgccccgtcatgacc
gatgaccagacgctgactatcgaggccggacgccatcccgtggtggaagcagccctggaa
ggcggtccgaccccctttatgcccaacgatacggatctgtccgccagcagacgcgtcatg
ctgctgaccgggccgaatatggcgggcaaatccacctatctgcggcagaacgccctgatt
gtcattctggcgcaggcgggactaccggttccggccagagcagcccatatcggtattgta
gatcgcctgttcagccgggtcggcgcgtcggatgatctggcacgcgggcaatcgactttc
atggtcgaaatgactgaaaccgccgccattctgcatcaggccggtccccgttccctggtc
gtcgtggatgaaatcgggcgtggtacctccacgctggatggtctggccatcgcctgggca
gtgctggaagccctgcatagccgtatcggcgcacgcacgattttcgccacccatttccac
gaactggcgcgcctgcaaggggaactgccgatgctgcgcccctatacaatgaaagtgcag
gaatggcgcggtaaggtcgtgtttctgcatgaagtggcggaaggggccggaggacgaagc
tggggtgtccatgtcgcgaaactggctggtgtgcctgccgccaccgtccgcagggccgga
cagttgctcacggcactggaggaacgttccgccgggctgaccgataacgcgactctgccc
ctgttcgccgccagccatggcaacgaaacagagacagagccggcagaaggcattcatgaa
gcaaaacctgcttctctaccgcaagaattgatcgaggcactggggcagatggaaccggat
aaactcaccccacgcgaagcactcgatcttatatatcattttaagtctatgctttcttcg
caggcgcacaacggcgatgtagaagcggaatcatggtga
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