Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_1072
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Entry
GbCGDNIH1_1072 CDS
T00392
Name
(GenBank) D-alanyl-D-alanine serine-type carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
gbe
Granulibacter bethesdensis CGDNIH1
Pathway
gbe00550
Peptidoglycan biosynthesis
gbe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gbe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GbCGDNIH1_1072
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gbe01002
]
GbCGDNIH1_1072
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gbe01011
]
GbCGDNIH1_1072
Enzymes [BR:
gbe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GbCGDNIH1_1072
Peptidases and inhibitors [BR:
gbe01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
GbCGDNIH1_1072
Peptidoglycan biosynthesis and degradation proteins [BR:
gbe01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GbCGDNIH1_1072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ABI61970
UniProt:
Q0BT82
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All DBs
Position
1205106..1206365
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AA seq
419 aa
AA seq
DB search
MPDVSSYPDLSRRAILGGVAGAAMMAGGVSEGWARGKAGASHRKKDAAKAAEATAEPQGS
PANTPFGPYDTVAKWAVVVDFNTGATLLDKEADVQMPPSSMTKLMTAYIVYGELKAGKLQ
MDQMLPVSEKAWRLQGSKMFVPYPGSVKVEDLIRGMIVDSGNDACIVLAEGIAGSEQQFV
DLMNQKAKLLGLTNSNFENCTGMPSANHHMSVRDIATLARRIIQDFPEYYHFDSEKTFKY
NNIEQQNRNPLVQKGIADGLKTGHTDAGGYGVCASAERNKRRVILVVNGLTTSHQRASES
ERLLEWAFSQFENVTLFTAGDTIDSAPVYLGTSKTVPLVGGKDLVVTMPRQWQKKAKISI
SYDAPVRAPVTKGAALGTLTISGDGVPNLTVPLLAGADVPRLALPSRAMAVLTHYVTGS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttgccagacgtgtccagctatcctgatctatcccgccgcgcgatattgggtggtgttgcc
ggtgctgccatgatggcaggcggcgtatcagaggggtgggcacgcggcaaggcaggcgcg
tctcatcgtaaaaaagacgcggccaaggcggcagaggctacggcggaacctcagggatca
cctgcgaacacgccgttcgggccttatgacacggtggcgaaatgggccgttgtggtcgat
ttcaatacgggtgctaccctgttggataaggaggcggatgtgcagatgccgccttcttcc
atgaccaagctgatgaccgcctatatcgtctatggcgagttgaaggccgggaagctgcaa
atggatcagatgcttcctgtcagtgaaaaggcatggcgtctgcaaggttcgaaaatgttt
gtgccttatccgggcagtgtgaaggttgaggatctgatccgcggtatgatcgtggattcc
ggtaatgatgcctgcatcgtgctggcagagggtatcgccggatcggagcagcaatttgtc
gatctgatgaaccagaaagccaaattgctggggctgaccaacagcaatttcgaaaactgt
accggcatgccttccgccaaccaccatatgtcggtgcgtgatattgcgacgctggcccgt
cgcattattcaggatttccctgaatattatcacttcgattcggaaaagacctttaaatac
aataatatcgagcagcagaaccggaatccgctggttcagaaaggcatcgctgacgggttg
aaaaccggtcacaccgatgctggtggctatggcgtttgtgccagtgccgagcgcaacaaa
cgccgcgtgattctggtggtgaatggtctgacaacctcccatcagcgggcgtcagagagc
gaacgccttctggaatgggctttcagtcagttcgagaatgtgacgctgttcaccgcaggg
gacaccatcgacagcgccccggtttatcttggcaccagcaagaccgtgccgctggtgggg
ggcaaggatctggtggtgacgatgccgcgccagtggcagaaaaaggcgaaaatctccatt
tcctatgatgctccggtgcgtgcgccggtgacaaagggggccgcgcttggaaccctgacc
atcagtggagatggtgtgccaaatctgactgtacctcttctggcaggtgctgatgtgccg
cgtctggctcttccgtcccgtgcgatggcggtgctgacccattatgtcaccggcagctga
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