Citrifermentans bemidjiense: Gbem_3461
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Entry
Gbem_3461 CDS
T00749
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00470
D-Amino acid metabolism
gbm01100
Metabolic pathways
gbm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Gbem_3461 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Gbem_3461 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gbm01011
]
Gbem_3461 (alr)
Enzymes [BR:
gbm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Gbem_3461 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
gbm01011
]
Precursor biosynthesis
Racemase
Gbem_3461 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
BTRD1
Motif
Other DBs
NCBI-ProteinID:
ACH40454
UniProt:
B5EBG2
LinkDB
All DBs
Position
complement(3973793..3974932)
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AA seq
379 aa
AA seq
DB search
MDSRPTVVEIDLAALRHNFSLVQKRVPEGCGLLAVVKADAYGHGFQYVSEELEKLGVDAF
AVAFLAEGVQLRMSGITRPVLILGGIYPGEERRCIGLNISTALFSLEQAAALDQAALEIK
CYRKAHIHLKVDTGMGRLGVPYHEVPEFLAKLKQFKNLELEGIFSHFASADELDPEGIAF
TKLQAERFNAAVEEARRQGYAPTYVHVANSAAILTQDLPYCNLARPGIILYGALPSGDFE
GQVPSQPVMRLKSRVAMLKWVEPGTSISYGRRYVAAERALIASVPVGYADGYCRSLTNKG
EALIRGQRAKVAGTVCMDWIMLDVTNVKGVAVGDDVTLLGPDPMGDCISAEEMAEKAGTI
PYEVLCGIATRRVRRVYLG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcgtcctacagttgtcgagatagatcttgccgcattgcggcacaatttctcc
ctggttcaaaagcgggtccccgaagggtgcgggcttttggccgtggttaaggcggacgcc
tacgggcatggcttccagtacgtttcggaagagctggagaagctcggtgtcgacgccttc
gccgtcgccttcctggccgaaggggtgcagctgcgcatgagcggcatcacccggccggtg
ctgattctcggcgggatctaccccggcgaggagaggcgctgcatcggcctcaatatctcc
accgcgcttttctcgctggagcaggccgcggcgctggaccaggccgcgctggagatcaag
tgctaccggaaggcgcacatccatctcaaagtcgacaccgggatggggaggctcggggtt
ccctaccacgaggtccccgagttcctcgccaagctgaagcagttcaagaacctggagctg
gagggaatattctcccacttcgccagcgccgacgaactcgaccccgaagggatcgccttt
accaaactgcaggccgagcgtttcaacgccgccgtcgaagaggcgcgccggcagggatac
gcgcccacctatgtgcacgtcgccaacagcgccgccatcctcacgcaggatctcccttac
tgcaacctcgctcgccccggcatcattctgtacggcgcgctcccctccggcgacttcgag
gggcaggtcccgtcgcagccggtgatgcgcctgaagagccgggtggcgatgctcaagtgg
gtcgagcccggcaccagcatcagctacggcaggcgctacgtggcggccgagcgcgccctc
attgccagcgtcccggtaggctacgccgacggctattgccgcagcctcaccaacaaaggc
gaggccctgataagggggcagcgggcgaaggtagccggcaccgtctgcatggactggatc
atgctggacgtcaccaacgtaaaaggggtcgcggtaggcgacgacgtgacgctactgggt
cccgatcccatgggggactgcatcagtgccgaggagatggccgagaaagccgggaccata
ccgtacgaagtcctctgcggcatagccacccgccgcgtgcgcagggtgtatctcggttag
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