Gallionella capsiferriformans: Galf_0337
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Entry
Galf_0337 CDS
T01295
Name
(GenBank) D-alanine/D-alanine ligase
KO
K00075
UDP-N-acetylmuramate dehydrogenase [EC:
1.3.1.98
]
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gca
Gallionella capsiferriformans
Pathway
gca00470
D-Amino acid metabolism
gca00520
Amino sugar and nucleotide sugar metabolism
gca00550
Peptidoglycan biosynthesis
gca01100
Metabolic pathways
gca01250
Biosynthesis of nucleotide sugars
gca01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Galf_0337
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Galf_0337
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Galf_0337
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Galf_0337
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gca01011
]
Galf_0337
Enzymes [BR:
gca01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.98 UDP-N-acetylmuramate dehydrogenase
Galf_0337
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Galf_0337
Peptidoglycan biosynthesis and degradation proteins [BR:
gca01011
]
Precursor biosynthesis
Transferase/Dehydrogenase
Galf_0337
Amino acid ligase
Galf_0337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
MurB_C
Dala_Dala_lig_N
FAD_binding_4
ATP-grasp_3
ATP-grasp
ATP-grasp_4
CPSase_L_D2
ATPgrasp_ST
Neuropep_like
TTL
Motif
Other DBs
NCBI-ProteinID:
ADL54381
UniProt:
D9SJN2
LinkDB
All DBs
Position
383204..385099
Genome browser
AA seq
631 aa
AA seq
DB search
MNMSEPGQFIAAVLRGKLSLDQSMRRHTSWRVGGAADRVYQPADLDDLRVYLCSLPLDEP
LVAVGLGSNLLVRDGGVRGTVLLMHGALTELAMQQDGLIYVQAGVPGAKLARFAANHDLA
GAEFCAGIPGTLGGMLAMNAGCYGSEIWQHVVRVQVVTRSGELIERASSEYQIAYRSVTK
KQDGASDEFFVGAWLSFVQGDGQVARQNIKELLAKRISSQPLNLPNAGSVFRNPANDYAA
RLIEQCGLKGKKIGGAQVSEKHANFIVNVDNATADEIENLICQVRQTVMTQTGVDLHPEV
KIIGEASVKMANSKTDFKTLNPEFSTLNPAAYGKVAVLFGGRSAEREVSLKSGAAVLASL
LRSGVDAHAFDPASRSLQELQEQGFDRVFIALHGRFGEDGTVQGALELLGIPYTGSGVMA
SSLGMDKWRSKLVWQAGGLPVPDFMMLAEQSEPLDVIGKLGLPLFVKPANEGSSVGISKV
KAVGELQAAYREAARHDPLVIAERFIGGGEYTVAILGDQVLPVIKIEPANEFYDFEAKYL
RDDTCYRCPSGLDAASEAKMQGLAQAAFALIGGQGWGRVDFLMSEAGQPYVLEANTSPGM
TDHSLVPMAARQAGISFDELVLRVLGMAHVG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgagcgagccgggacagtttatcgcggcggtactgagaggcaagttgagcctt
gatcagtccatgcgccgtcataccagctggcgagtaggcggtgcggctgatcgcgtgtat
caaccggctgatctggatgacttgcgggtgtatttgtgcagtctgccgctcgatgaaccg
ttggtcgccgttggcctcggcagcaatttactggtgcgcgatggcggtgtacgcggcacg
gtactgttaatgcacggcgcattgactgaacttgcgatgcagcaagacggactgatctac
gtgcaggctggagtgccgggtgcgaagctcgcgcgctttgccgccaaccatgatttagcc
ggcgcagaattttgcgcaggaatcccggggacgctgggcggcatgctggcgatgaatgcc
ggttgttatggcagtgaaatctggcagcacgtcgtgcgtgtacaggtggtaacgcgcagc
ggcgagttgatagagagagcatcgtcggaatatcagatcgcttatcgaagcgtgacaaag
aagcaggatggagcatcggatgaatttttcgtcggggcatggttgtcttttgtgcagggc
gatggacaggttgcgcgacaaaacatcaaggagctattggccaagcgcattagctctcag
ccgctgaatctgcccaatgcagggtcggtgtttcgcaatccggcaaatgattacgcggcg
cgtctgatcgaacagtgcgggctgaagggtaaaaaaattggcggtgcgcaagtatctgaa
aaacatgcaaattttatcgtcaatgtggataacgcaacggccgatgagattgaaaacctg
atttgtcaggtaaggcagacggtcatgacgcaaacaggggtggatttacatcctgaagtg
aaaatcatcggagaggcgagcgtaaagatggctaacagtaagacggattttaaaacgctg
aacccggaattctcaacgctcaatcctgctgcttacggcaaggttgccgtgctgttcggc
ggacgatctgccgagcgcgaagtttcactcaagagcggggcggcggtactcgcttcattg
ctgcgcagcggcgtggatgcgcacgcgtttgatccggctagccggagtttgcaggagttg
caagagcagggattcgatcgcgtatttatcgcactgcacggccgattcggtgaggatggc
acggtgcagggcgcactggaattgctgggtattccctacacgggaagcggcgtgatggcc
tcttcactggggatggacaaatggcgcagcaagctggtttggcaggcaggcggattgccg
gtgcctgattttatgatgctggctgagcaaagcgagccgctcgacgtcatcggaaaactg
ggtttgccgctgttcgtgaaacctgccaatgaaggttcgagtgtcgggatcagcaaggtt
aaggcagtgggtgagttgcaggcggcatatcgagaggcagcccgtcacgaccctctggtg
atcgcggagcgcttcatcggtggcggcgaatatacggtggcgattctgggtgatcaagtt
ctgccggtgatcaaaatcgaacctgccaacgaattttatgactttgaagccaaatacctg
cgcgacgacacgtgttatcgctgtccgagcgggctggatgcggccagcgaagcaaagatg
cagggattggcccaggccgcatttgccctgatcggtggacaaggctgggggagggttgat
tttctgatgagcgaagcgggtcagccttatgtgctggaagcgaatacctcgcctgggatg
acggaccacagtctggtaccgatggccgcacgtcaggcgggaatcagttttgatgagctg
gtgttgcgtgtattaggaatggcgcatgtgggataa
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