Gymnodinialimonas ceratoperidinii: KYE46_10500
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Entry
KYE46_10500 CDS
T08063
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gce
Gymnodinialimonas ceratoperidinii
Pathway
gce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KYE46_10500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gce03400
]
KYE46_10500
Enzymes [BR:
gce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KYE46_10500
DNA repair and recombination proteins [BR:
gce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KYE46_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QXT38379
UniProt:
A0A8F6Y8Y5
LinkDB
All DBs
Position
2157092..2158516
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AA seq
474 aa
AA seq
DB search
MKRIVVPRLGADKAWREAARGCLAAGIAPDEVTFSEAGAGGLFDEVIAPPSGGTRAINVP
KSFISLAETVVWHSDADRFDRLYACLWRLQKQRGLMQDRADPLVQSLRRMEKNVHRCQHK
MKAFVRFREIGDPAAARRSFAAWFEPTHHTVEPTAQFFANRFGDMDWRIVTPDVSAFFEG
GKLSFALDMPRPEMPEDAHEDLWTTYFCNIFNPARLKVNAMTSEMPKKYWKNLPEAASIP
GLIAQAPTRAREMAEAAPTLPPLRAARVQEAAERGTHWDGPSEGFAAALAGCQRCHLCHH
ATQVVPGIGPEAADLMIVGEQPGDREDLEGVPFVGPAGQVLTQAMATAGVSREGVYMTNA
VKHYKHIVRGKRRIHQSPNRDEIQHCQFWLDAEVGRVKPKMIVALGATAALSLTGRNGPM
KTRRGTVEPGRLGVPVLITYHPAYVLRLRDQAAQDAARAALSADLATAWKQQAA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggatcgtggtgcctcggcttggggcggataaggcatggcgagaggcggcacgg
ggctgcctcgccgccgggatcgcgccggacgaggtgaccttctcggaagcgggcgcaggc
gggctctttgacgaggtgattgcgccgccctcaggcggtacccgcgcgatcaacgtgccg
aagtccttcatatcgctggcggaaacggtggtgtggcacagtgatgccgatcgctttgat
cggctctatgcctgcctctggcggctccagaaacagcgcgggctgatgcaggaccgcgcc
gatcccctcgtccagtccctgcgccggatggagaagaacgtccaccgctgccagcacaag
atgaaggccttcgtccgcttccgcgagatcggcgatcccgccgccgcccgccgcagcttc
gccgcctggttcgagccgacgcaccacacggtcgagccgacggcgcagttctttgccaac
cgtttcggcgacatggactggcgcatcgtgaccccggatgtttcggccttcttcgagggc
ggcaagctgagcttcgcgctcgacatgccccgccccgagatgcccgaagacgcccacgag
gatctctggaccacctacttctgcaacatcttcaacccggcacggctgaaggtgaacgcg
atgacctcggagatgccgaagaaatactggaagaacctgcccgaagccgcctcgatcccc
ggcctgatcgcgcaggccccgacgcgcgcccgcgaaatggccgaggccgccccgaccctg
ccaccgctccgcgccgcgcgggtgcaggaagccgccgagcgcggcacccattgggacggc
ccctcggaaggctttgccgccgccctcgccggatgccagcgctgccacctctgccaccat
gccacccaggtcgtccccggtatcgggccggaggcggccgatctcatgatcgtgggagag
caaccgggcgaccgcgaggatctggaaggcgtgcctttcgtcggtcccgccggtcaggtc
ctaacgcaggcgatggcgacggcgggcgtcagccgcgagggcgtctacatgaccaatgcg
gtcaagcactacaagcatatcgtgcgcggcaagcgtcgcattcaccaaagcccgaaccgc
gacgagatccagcactgccagttctggctcgatgccgaggtcgggcgggtaaaaccgaag
atgatcgtggccctcggcgcgacggcggcgctgtccctgacgggccgcaacggcccgatg
aaaacgcgccgcgggacggtggagccggggcgtctgggcgtgccggtgctgatcacctac
caccccgcctatgtcctgcgcctgcgcgatcaggcggcacaggacgcagcacgcgcggcg
ctctcagcagacctcgcgaccgcatggaagcagcaggcggcctga
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