Gymnogyps californianus (California condor): 127021847
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Entry
127021847 CDS
T08687
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127021847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gcl03041
]
127021847
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127021847
Spliceosome [BR:
gcl03041
]
Complex A
U2 snRNP components
U2 related factors
127021847
Complex B
127021847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
127021847
NCBI-ProteinID:
XP_050761080
LinkDB
All DBs
Position
14:complement(18286465..18311160)
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AA seq
1045 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRGKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSK
EKTEGVEVSKEKKKDKEDKEEEKDKDATTNTVATENFDQNKLEEEMRKRKERVEKWREEQ
RKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEE
VKEEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEY
SSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYR
LELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIG
IAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGL
RVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRM
FDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVE
QHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGID
QYDRDSIINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAG
NKGYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFS
GKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPG
TSNAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTI
QAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTAR
WKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEIT
RLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtccaggcattatcggaagcgctctgcgtcacgtggacgctccggtagc
cgttctagaagtcgttctccatctgacaaaagaggaaaacgtggagaagacagacgctct
agaagtagagatcgagaacgtagacgtgagaggtcacgcagtagggacaagagaaggtct
cgatcgcgtgacagaaagcgtcaaagacgttccagaagtagagaaagggaacggagccga
gagagaagaagatcccggagccgagagaggaggcgctctagaagcagaagcagaggtaga
cggtctcgatcctccagtccaagcaagaacaggaaaacagaaaacagatcaagatctaaa
gaaaagacagaaggtgtggaagtttccaaagaaaagaaaaaagacaaagaagacaaagaa
gaagagaaggataaagatgctaccacaaatactgtggccactgagaattttgatcagaac
aaactagaagaagaaatgagaaaacgaaaagaaagagtggagaaatggagggaagaacaa
cgcaagaaggctatggaaaacataggagaactgaaaaaagaaatcgaggagatgaaacag
gggaaaaaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagaa
aaagaaggcaatgaggttgaagatgaagagttagatcctttggatgcttatatggaagaa
gtaaaagaagaggtcaagaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaa
aagaaaactggaccaactgttaccaaagtggtaaccgtggtgacaaccaaaaaggcagct
gcagagtcagaaaagaagaaaggggagctcatggagaatgaccaagatgcaatggagtat
tcctcagaagaggaggaagttgatcttcagactgccctgactggctatcagaccaagcag
agaaagctgctagaaccagtggatcatggaaagatagaatatgaacctttcaggaaaaac
ttctatgttgaagtaccagaactagctaaaatgactcaagaagaggtgaatgtgtacagg
ctggagttggagggaattacagtcaagggaaaaggctgcccgaaaccaataaaaacctgg
gtacagtgtggtatttccatgaagattctcactgccctcaaaaaacatggctatgaaaag
cccactcccattcaaacccaggctatcccagcaattatgaatggacgtgatttgattggc
attgctaaaacaggaagcggaaaaactattgcatttctgttgcccatgttcagacacatt
atggatcagagagcgttagaagaaggagaaggtcccatagctgtcatcatgacacctact
cgtgagttggctttgcagattaccaaggagtgtaagaaattctcaaagacacttgggctt
cgagttgtctgtgtttatggaggaacgggaatcagtgaacagatagctgaactcaaaaga
ggtgctgaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaat
ggtcgggtgacaaatctccgtagagtcacatatgttgtacttgatgaagcagacagaatg
tttgacatgggttttgagcctcaggttatgcgcattgtagacaacgtcaggcctgatcgt
cagactgtcatgttctctgctacttttcccagagctatggaggcattagctcggagaatc
ctaagtaaacctatagaagtgcaggtcggaggcagaagtgttgtctgttctgatgtggag
caacatgttattgtcatagaagaggagaacaagtttttgaagttactggagctactggga
cactatcaggagaaaggatcggttatcatatttgtagataaacaagaacacgctgacggg
ttgttgaaagatttaatgagagcctcttatccttgcttgtctcttcatggaggtattgat
cagtatgacagggacagcataattaatgatttcaagaatggaatttgcaaacttctggtg
gccacatctgtcgcagcaaggggcttggatgtaaaacaattgatgctggtggtcaattat
agctgtcccaaccattatgaagattatgtgcaccgagcaggccgaactgggcgagccggc
aataaagggtatgcatatacattcattactgaggatcaggcacggtatgctggtgatatc
attaaggctttggaattgtccgggaatccaattcctactgatttggagaagctctgggct
gacttcaaagaccaacagaaggctgagggaaagctgattaaaaaaagcagtggattctct
ggcaaaggttttaaattcgatgaaacagaacaggctttggctaatgaaagaaagaagcta
caaaaagcagctcttggcttgcaagattcagatgatgaagatacagctgttgatatcgat
gaacaaattgaaagcatgttcaattcaaagaaaagagtaaaagacatggcagcaccagga
acatcaaacgctcctacaccatcagctgggaatgcagaaaaattggaaattgctaaaaga
ttggctttgagaatcaatgcccagaagaatcttggagcggaggcacaagtattggtcccc
ttccactttaaggatgtgatgcagcaggctacaaatgctatcctgagaggaggcacaatt
caggctcctactgtatctgccaaaaccattgcagagcaactggctgaaaaaatcaatgct
aagcttaattatgtacccatagagaagcaggaggaagagaaacaggatggaggacaaaat
gaatcctttaagagatatgaagaagaattagagatcaatgacttcccccagactgccaga
tggaaagttacctccaaagaagcgctacagagaatcagtgaatattctgaagctgctatt
acaatcagaggaacttatttccctccaggcaaagaacccaaggaaggagaacgaaagatt
tatttggctatagaaagtgccaatgaactggctgtacagaaagcaaaggcagaaatcaca
cgacttataaaagaggagctcatcagattgcaaaattcataccaaccgaccaacaaagga
agatacaaagttctatga
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