Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI3193
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Entry
GDI3193 CDS
T00631
Symbol
murB
Name
(GenBank) UDP-N-acetylenolpyruvoylglucosamine reductase
KO
K00075
UDP-N-acetylmuramate dehydrogenase [EC:
1.3.1.98
]
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi00470
D-Amino acid metabolism
gdi00520
Amino sugar and nucleotide sugar metabolism
gdi00550
Peptidoglycan biosynthesis
gdi01100
Metabolic pathways
gdi01250
Biosynthesis of nucleotide sugars
gdi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
GDI3193 (murB)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GDI3193 (murB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GDI3193 (murB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GDI3193 (murB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gdi01011
]
GDI3193 (murB)
Enzymes [BR:
gdi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.98 UDP-N-acetylmuramate dehydrogenase
GDI3193 (murB)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GDI3193 (murB)
Peptidoglycan biosynthesis and degradation proteins [BR:
gdi01011
]
Precursor biosynthesis
Transferase/Dehydrogenase
GDI3193 (murB)
Amino acid ligase
GDI3193 (murB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
MurB_C
Dala_Dala_lig_N
FAD_binding_4
B12-binding
ATP-grasp_3
ATP-grasp_4
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
CAP57136
RhizoBase:
GDI3193
UniProt:
A9H0J6
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All DBs
Position
3281534..3283471
Genome browser
AA seq
645 aa
AA seq
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MTTPPAPSDASWTAEVRAMLAGLRGRLTQGAPLGPRTWFRVGGPAEILLQPADTQDLADA
LHRLPPDVPVTVLGACSNVIIRDGGIDGVVIRLGGGFADIVAEPDGLVVGAACLDMVVAE
RAAEAGLKGLEFLAGIPGSIGGAVAMNAGAHGSDVATVLDWADIITRDGNSVRLSGPALG
FGYRRSALPAGAVVVRARLRAAPAAPADIRQAIAAIRQSREESQPTRARTGGSTFRNPDP
SVTDRKAWELIDSAGCRGLTMDGAQVSTKHCNFILNTGDATAAAPGTPGRERAQAGARPY
RRHAGVGNQADRPSRHPIPDRDSHWGRRTVMTRPRTITVLTGGLSAERTVSLSSGAGISA
ALREEGFDVRVLDAGPDLGAIVADLTAHRPDVVFNALHGRFGEDGSIQGVLDWMNIPYTH
SGVRASAMAMDKAAARSAFRAAGLPVAQGGVIAIADFPAADPLPAPYVIKPLNEGSSVGV
EIVRPGTNRRAAIADAWTYGPLALVEEFIPGRELTVGVMGDRALTVTDITPNPDAGHEFY
DYAAKYQNGGSRHILPARIHPDAFAQALDLAVAAHRALGCAGASRTDFRYDDTQCGDGPG
RLVILEVNTQPGMTPTSLLPEQAGACGIPYGALCRWMVEHAACRT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgccccccgccccttcggatgcatcctggaccgccgaggtacgcgcaatgctg
gccggcctgcgcggacggctgacccagggtgcgccgctgggcccgcgcacctggttccgc
gtcggcggcccggcggaaatcctgctgcagccggccgatacgcaggacctggcggacgcg
ctgcaccgcctgccgccggacgtgccggtcacggtgctgggcgcgtgctcgaacgtgatc
atccgcgacggcgggatcgacggggtggtgatccggctgggcggcggctttgccgacatc
gtggcggaaccggacgggctggtggtcggcgcggcctgcctggacatggtcgtggccgaa
cgcgcggccgaggcggggctgaaggggctggaattcctggccggcattcccggttcgatc
ggcggcgcggtcgccatgaacgcgggcgcccacgggtccgacgtcgcgacggtgctggac
tgggccgacatcatcacccgcgacggcaacagcgtgcgcctgtccgggccggcgctgggg
ttcggctatcgccggtcggcgctgccggctggcgcggtggtggtgcgcgcgcgcctgcgc
gccgcgcccgcggcccccgccgacatccgccaggccatcgcggccatccgccagtcgcgc
gaggagtcgcagcccacgcgggcccgcaccggcggatcgaccttccgcaaccccgacccg
tcggtgacggaccgcaaggcgtgggaactgatcgacagcgccggctgccggggcctgacc
atggacggcgcacaggtcagcacgaagcactgcaatttcatcctgaacaccggcgacgcc
accgccgccgcccctggaacgcctgggcgagagcgtgcgcaagcgggtgcgcgtccatac
cggcgtcacgctggagtgggaaatcaagcggatcggccgtcccgccaccccatccccgac
cgagacagccattggggcaggagaaccgtcatgacccgtccgcgcaccatcacggtgctg
accggcggcctgtccgccgagcgcaccgtcagcctgtccagcggcgccggcatcagcgcc
gccctgcgcgaggaaggattcgacgtccgcgtgctggatgccgggccggacctcggcgcc
atcgtcgcggacctgacggcgcaccggcccgacgtggtgttcaacgccctgcacggccgc
ttcggcgaggacgggtcaatccagggcgtgctggactggatgaacatcccctacacccat
tccggcgtccgcgcgtcggccatggcgatggacaaggcggcggcccgctcggccttccgc
gccgcgggcctgccggtggcgcagggcggggtcatcgccatcgccgactttcccgccgcc
gacccgctgcccgccccctatgtcatcaagccgctgaacgaaggatcgtcggtgggtgtc
gagatcgtacggccgggcaccaaccgccgcgccgcgatcgccgacgcatggacctacggc
cccctggcgctggtcgaggaattcatccccgggcgcgaactgacggtgggggtaatgggc
gaccgcgccctgaccgtgaccgacatcacccccaatcccgatgccgggcatgaattctac
gactacgccgccaagtaccagaatggcggatcgcggcacatcctgcccgcgcgtatccac
ccggacgcgttcgcccaggcgctggacctggcggtggccgcccaccgcgcgctgggctgc
gccggcgcgtcgcgcaccgatttccgttacgacgacacgcagtgcggcgacgggccgggg
cgactggtgatcctggaggtcaatacccagcccggcatgaccccgacctcgctgctgccc
gaacaggcgggggcctgcggcatcccctatggcgcgctgtgccggtggatggtcgaacac
gcggcgtgccggacctag
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