Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_2990
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Entry
Gdia_2990 CDS
T00798
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Gdia_2990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gdj03021
]
Gdia_2990
03400 DNA repair and recombination proteins [BR:
gdj03400
]
Gdia_2990
Enzymes [BR:
gdj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Gdia_2990
Transcription machinery [BR:
gdj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Gdia_2990
DNA repair and recombination proteins [BR:
gdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Gdia_2990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
ACI52720
UniProt:
A9H3I9
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All DBs
Position
3265011..3266030
Genome browser
AA seq
339 aa
AA seq
DB search
MVLQKNWQSLIKPEKLEVEPGGEPLRTATVVAEPLERGFGMTLGNAIRRVLLSSLQGAAV
TAIQIDGVLHEFSSVAGVREDVTDIVLNVKQLALRMHGEGPKRMVLTATGPGEVRAGQIQ
TGHDIEVMNPDLVICTLDEGVKFGMEFTVNLGKGYVPAAANRPEDAPIGLIPVDAIYSPV
RRVSYKVEPTRVGQVTDYDRLLLTVETNGAVTPEDAVALAARILQDQLQLFINFDEPRPV
RTEEPQDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEQEMLRTPNFGRK
SLNEIKEVLTSMGLSLGMNVPAWPPENIEDLAKRLDEPF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttggtcctccagaaaaactggcaatctctgatcaagccggagaagctggaagtcgagccg
ggcggagagccgttacgcacggcgaccgtggtggcggagccgctggagcgcggcttcggc
atgacgctcggcaatgccatccggcgcgtgctgctgtcctcgctgcagggcgcggcggtg
acggcgatccagatcgacggcgtcctgcacgagttctcgtccgtggccggcgtccgcgag
gacgtcaccgacatcgtgctgaacgtcaagcagcttgccctgcggatgcatggcgagggg
ccgaagcgcatggtgctgacggccaccgggccgggtgaagtgcgggcgggccagatccag
accgggcatgatatcgaagtcatgaatcccgacctggtgatctgcacgctggacgagggc
gtgaagttcggcatggaattcaccgtgaacctgggcaagggctacgtcccggcggcggcg
aaccgtcccgaggacgcgccgatcggcctgattccggtcgatgccatctattcgccggtg
cgtcgcgtgtcctacaaggtcgagccgacccgcgtgggccaggtgaccgattatgaccgg
ctgctgctgacggtggaaaccaacggcgcggtgacgcccgaggatgcggtggccctggcc
gcgcgtatcctgcaggaccaactgcagctgttcatcaatttcgacgagccgcgtccggtc
aggaccgaagagccgcaggacgacctgccgttcaaccggaacctgctgcgcaaggtcgac
gaactggaactgtcggtccgcagcgcgaactgcctgaagaacgacaacatcgtctatatc
ggcgacctggtgcagaagaccgagcaggagatgctgcgcactccgaacttcggtcgcaag
tcgctgaacgagatcaaggaagtcctgacttcaatggggctgtcccttggtatgaatgtg
ccggcctggccgccggaaaatatcgaagacctggccaagaggctcgacgagccgttctga
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