Geobacillus sp. 12AMOR1: GARCT_00254
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Entry
GARCT_00254 CDS
T03966
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea00470
D-Amino acid metabolism
gea00550
Peptidoglycan biosynthesis
gea01100
Metabolic pathways
gea01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GARCT_00254 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GARCT_00254 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GARCT_00254 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gea01011
]
GARCT_00254 (ddl)
Enzymes [BR:
gea01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GARCT_00254 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
gea01011
]
Precursor biosynthesis
Amino acid ligase
GARCT_00254 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AKM17602
LinkDB
All DBs
Position
243062..244156
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AA seq
364 aa
AA seq
DB search
MKTRVGVLYGGKSPEHQVSLSTAMAVMNAIDPHKFDVIPIYITPEGQWIKGEQLTGPIEE
IKQLQFTSAATALIPVSLNQVPAADSAAGGNEETIDVIFPLLHGPNGEDGTVQGLLEILN
IPYVGNGVLASAVGMDKVMMKNLFAQAGLRQAKYVAVTKYDWQKSGEAVYDRIEQELGYP
CFVKPANAGSSVGISKCKQRGDLKAAFIEAFQYDRKIIIEEAIVGREIEIGVIGNDEPIC
SVVGEIVPKKEFYDYEAKYEDGQTELIIPADVTKEQYETIKQMAITAFQALDLSGLARVD
FFLAEDGAVYINEVNTMPGFTPYSMFPLLWQHSGVPYPELIERLIALALERHQEKQTITY
TFEK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgagagttggcgtgttatacggcggcaaatcaccggagcaccaagtatcgttg
tcgacggcgatggcggtgatgaacgccattgatcctcataaattcgatgtcattccgatt
tatattacaccggaaggtcaatggatcaagggcgaacagttgaccggaccgatcgaggaa
atcaagcagctgcaattcacttcggcggcgaccgccttgattccggtttccttgaaccaa
gttccggctgccgattcggctgcgggaggaaacgaggaaacgatcgatgtcattttcccg
cttttgcatgggccgaacggcgaagacggaacggtgcaagggttgcttgagatattgaac
attccgtatgtcggcaacggggtgcttgcttccgcggtcggcatggataaggtgatgatg
aaaaacttgtttgcccaagccgggctgcgccaggcgaaatatgtggcggtgaccaaatat
gactggcaaaaaagcggggaagccgtctacgaccggatcgaacaagagcttggctacccg
tgctttgtcaaaccggccaatgccggttcgagcgtcggcatttccaaatgcaagcagcgc
ggcgatttaaaagccgcatttatcgaggcatttcagtatgaccgaaaaattattattgaa
gaggcgattgtcggccgcgaaattgaaatcggcgtgatcggaaatgatgagccgatttgt
tcggtcgttggcgaaattgttcccaaaaaggaattttacgactatgaagcgaaatacgaa
gacgggcaaaccgaattgatcatcccagcggacgtaacgaaagaacagtatgagacgatc
aaacaaatggccattacggcgtttcaggcgctggatttgtctggacttgcgcgcgtcgat
tttttcctcgccgaagatggcgctgtttatatcaacgaagtgaacacgatgccaggcttt
acgccatacagcatgttcccgcttctttggcagcacagcggcgtgccgtatccggaactg
atcgagcgcctcattgcgctggcgttggaacggcatcaagaaaagcagacgatcacgtac
acatttgaaaaataa
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