Geobacillus sp. 12AMOR1: GARCT_00566
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Entry
GARCT_00566 CDS
T03966
Symbol
rluD_1
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gea03009
]
GARCT_00566 (rluD_1)
Enzymes [BR:
gea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
GARCT_00566 (rluD_1)
Ribosome biogenesis [BR:
gea03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GARCT_00566 (rluD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AKM17868
LinkDB
All DBs
Position
complement(549740..550639)
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AA seq
299 aa
AA seq
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MWTRKGDWLECIIPSWWSGLTIEQLLKDVWSASKKLAHRWRMEHGVKLNGQAVPWKTVLN
ERDRLQLYAYEPEPSFIVPEYRELSILWEDDHLLVLNKEAGIDIHPSEPGQTGTLANAVA
FYLQSQAILTKVRHIHRLDRDTSGAILFAKHPLAGATLDWMLAHRAIKRTYVALVHGRLS
PESGTISAPIGRDRHHPTRRRVSKTGTKAVTHYRVIKTFPSTSLVELSLETGRTHQIRVH
LAHLGHPLVGDTLYGGQPIFHRHALHAAKLTFRHPFTNEEVICLAPTSDFPTDLSRIYN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgtggacaagaaaaggcgattggctggaatgcatcatccctagctggtggagcggtttg
acgattgaacagctcctgaaagacgtatggtccgcctcgaaaaagctcgcccaccgttgg
cggatggaacacggcgtcaaactgaacggccaggctgttccctggaagacggtgctcaac
gaacgcgaccggcttcagctttacgcatatgagccggagccgtcgttcatcgttccagaa
tatcgggagctttcgattttatgggaggacgaccatctgctcgtcttgaacaaagaagcc
ggcatcgacattcatccgtccgaaccggggcaaaccggcacgctcgccaatgcggtcgcg
ttttatttgcagtcgcaggcaattttaacaaaagtgcgccacattcatcggctcgaccgc
gacacgtcgggagcgattttatttgccaaacacccgcttgccggtgcgacgctcgattgg
atgctcgcccaccgtgccatcaagcggacgtacgtcgcccttgttcacggtcgtttgtcc
ccggaatcaggaaccatttccgcgccaatcggccgcgaccgccaccatccaacgcgccgg
cgcgtctcgaagacggggacaaaagcggtgacacactatcgcgtcatcaaaacattcccg
tcaacatcgcttgtcgagctttctctcgagactggacggacgcaccaaatccgcgtccat
ttggcccatctcggccatccgctcgtcggcgacacgctttacggcggccagccgatattt
catcgtcatgcgctgcatgccgctaagctaacgttccgccacccgtttacaaacgaagag
gtcatttgtctcgcgccaacaagcgattttcccaccgacctttcgcgcatttacaattga
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