Geobacter sp. M18: GM18_2128
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Entry
GM18_2128 CDS
T01421
Name
(GenBank) polyketide-type polyunsaturated fatty acid synthase PfaA
Organism
geb
Geobacter sp. M18
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
PP-binding
Ketoacyl-synt_C
KR
Acyl_transf_1
KAsynt_C_assoc
adh_short
adh_short_C2
PS-DH
PKS_DH_N
Thiolase_N
TfuA
Motif
Other DBs
NCBI-ProteinID:
ADW13588
UniProt:
E8WKL0
LinkDB
All DBs
Position
2557741..2565129
Genome browser
AA seq
2462 aa
AA seq
DB search
MLKTDDLKPAISSNGTRLAIIGIGCLFPQAADKNAYWANIVDGVDAITEVPPTHWPIDAY
YDEDQKSPDRTYGRRGGFLSPVDFNPMEFNIPPNVLEAIDTSQLLGLVAAGQALKDAGYG
PDRSFDKSSVSVILGVTGTLELVIPLGARLGHPVWRSALKDAGVDEETARDVVERISDSY
VPWQENSFPGLLGNVVAGRISKQYDLGGTNCVVDAACASSFSALHLASMELNSGKSDIVV
TGGIDTFNDIFMYMCFSKTPALSPSGNAKPFDVSADGTILGEGLGIVVLKRLADAERDGD
RIYAVIRGVGSSSDGKGDAIYAPSASGQKKALLNAYKNAGVTPETIGMLEAHGTGTKVGD
AVEVSALREVYGKAENPWCALGSVKSQIGHTKAAAGSAGLIKAALALHHKVIPPTIKVQT
PQKEVVADHSPFYLSTRKRPWFPRPDAPRRAGVSAFGFGGSNFHVVLEEYQPKKQSADWD
GNTQVLAFSGADASALAAKLDSVPAGAAWHAIRDLALASRASFDAKAACRLALVAERNKT
NLASLVKNARAMLDKNAKSAWQTPDGAYFACGGAPGKLGMLFPGQGSQYTGMLNDLACRF
PQVLDSVTAANQGFGCTGGRMLSDLIYPPSAFDEETSAKQEEALRATQAAQPAIGAASLG
ALRVLQAFGLNPDAVAGHSYGELTALCAAGRLNEDALHELSRLRGKLMGAGDGDKGSMLA
VSAPLARISEVVAAEKLDLVIANKNAPAQAVLSGASAEIKRAVPIFKALGLTCKELPVAA
AFHSALVADAAKPFLAALEKIDMPQAGIPVYANTTAAVYPSDVAAAKAQLAAQLAKPVEF
VAEIEAMYAAGITNFVEVGPGNRLTGLVQAILGDRPHLAFAVDASSGKRAGVADLARVLA
QLAVLGYGVNLALWDEGHRPAPAPTGKKPALTIPICGANYVKAKPKKPPVLPKPAVAAPV
QTVAAPVQPQPAAQVQAAAATVQPQTGYQSAAPANPAQGTCQPQAVQPASQGALTESLRL
AREGMAVLQKMQEDTALLHRRFLEGQEVAAKTFQALLAQQQHLIMGAPVGQAAPVAFAPV
APAPAAPVQAQAYVAPTPVAPPAPVQAAPAPAMPAAAPVVSAAPAAPAAPVAPAASSNTD
AARITQTLLNVISEKTGYPIEMLELDMGMDSDLGIDSIKRVEILSTLQDRLPGTPVIGPE
HLGTLRTLGDIAGHLAAGAASAVAAPPVAAAAASVASVAVPATGAATAQVTETLLAVVSE
KTGYPVEMLELDMGMDSDLGIDSIKRVEILSTLQERLPGSPAIGPEHLGTLRTLGDIAGH
LAAGSVSAAAFAPAAAAPAAAVAVPAAGVEAAQVTETLLAVVSEKTGYPVEMLELDMGMD
SDLGIDSIKRVEILSTLQERLPGTPAIGPEHLGTLRTLGDIAGHLAAGAVSAPAAVSVAV
AHQTAPATPAGDITAVLLEVVSEKTGYPVEMLELEMGMDSDLGIDSIKRVEILSTLQERL
PGTPAIGPEHLGTLRTLGDIAGHLGSGDVAPAAVSEPAAPAPGTPVPAAATSAAAVDPAA
VTQALLEVVSDKTGYPVEMLELTMGMDSDLGIDSIKRVEILSTLQERLPACPAIGPEHLG
TLRTLGDIAHFLAGPAKQAPSAIEAVALPATPADAAPAAPVAEPVQAAPQAIQRSSVVPV
LLGENDDADAITLANDGEIWVTDDGSAFAAELSGILLEHGCSVRKVDASQARQIAPAGKL
SGLVICAPVAGTDDQFLEDAFQLLKNASAALLESGRSEGAVCITVSRLDGAFGFGSGKSL
KDPLSGGLAGLAKTAAFEWPEVACKAIDLGEFPHPAAAAGAVAIEMLRSGPVEIGLTPEG
RFALQSAVLPTAAAPVVPAIAKGDVVVITGGGRGVTAVSALALAKEYHPFLVLLGRSSEP
QEEPAWLLGLTEEADIKRAIMQNAVGKLHPREIEERYRSVEAGRELTATLESIAATGAEA
IYRSVDIRDQSAMELLLGEVRRAHGPIRGVVHGAGVLADRLIVDKTPEQFEQVYSTKVHG
LRALLHATRNDDLKFIALFSSSTGRFGRVGQVDYAVANEVLNKTAQAEARRRSGCRCVSI
NWGPWDGGMVTPALKKVFASEGIGVIGLAEGGDFLAREISAAEAPVEIVAIAQLPEQVSA
AAPATSKHLSLSEAFSLTLTVPEYPFLRSHVLDGKAVLPMAVIVEWLAHGALHGNPGFRF
HGFNDLRICKGVVFEDNTPFTLNVMAGRAEKRESFWLVPVELSSPGVNGKTILHARAEIV
LATRHPEGIRSITEIPNTPYAPHDGVIYNSERLFHGPDLHGIEHVDGCSAKGISASVKGA
PAPAKWIRRPLRSAWLTDPLVLDSAFQMMILWSFERFGAGSLPCFAGRYRQFQESFPREG
VQVVIRVISETRHGASADMEFLDRNSGKLVARLEGYECVIDPSLKQAFQRNKLRTVTVVG
AA
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
ttgttgaaaactgatgatctgaaacccgccatctccagcaacggaactcggcttgccatc
atcggcatcggttgcctcttcccgcaggcagcggacaaaaacgcctactgggccaacatc
gtggacggggtcgacgcgatcaccgaagtccctcccacccactggccgatcgacgcgtac
tacgacgaggaccagaagagcccggaccgcacctacggccgtcgcggcggctttctctcc
ccggtcgatttcaacccgatggagttcaacatcccccccaacgtgctggaggcgatcgac
acctcgcagctgcttggtctggtggcggcaggtcaggcactgaaggacgcggggtacggc
cccgaccgcagcttcgacaagagcagcgtctccgtcatcctgggtgtcaccggcaccctg
gaactggtgatcccgctgggcgcgcgcctgggccacccggtctggcgctccgcgctgaag
gatgccggggtcgacgaagagaccgccagggacgtggtcgagcggatctccgactcctac
gttccgtggcaggagaattccttcccgggccttctgggcaacgtggtcgccggcaggatc
agcaagcagtacgatctcggcggcaccaactgcgtcgtggacgccgcctgcgccagctcc
ttcagcgcgctgcacctggcctccatggagctcaactccggcaagtccgacatcgtcgtg
accggtggcatcgacaccttcaacgacatcttcatgtacatgtgcttcagcaagaccccc
gcgctttcccccagcggtaacgccaagccgttcgacgtctccgcggacgggaccatcctc
ggcgaggggctcggcatcgtggtgctgaagcgtctggccgacgccgagcgcgacggcgac
cggatctacgccgtgatccgcggggtgggctcctccagcgacggcaagggcgacgccatc
tacgcccccagcgcgtccggtcagaagaaggcgctcctgaacgcctacaagaacgccggc
gttacccctgagaccatcgggatgcttgaggcgcacggcaccggcaccaaggtcggggac
gccgtcgaagtgagcgcgctgcgcgaggtgtacggcaaggccgagaacccgtggtgcgca
ctgggctcggtcaagtcccagatcggccacaccaaggccgcggcaggttccgcaggtctc
atcaaggcggctctagccctgcaccacaaggtgatcccgccgaccatcaaggtgcagaca
ccgcagaaagaggtggtggcggatcattcacccttctacctctccacccggaagcgcccc
tggttcccgcgtccggacgctccgcgccgcgccggcgtcagcgccttcggcttcggcggt
tccaacttccacgtggtgctcgaggagtaccagccgaagaagcagtcggcggactgggac
ggcaacacccaggtcctcgccttctccggcgcggacgcctccgcccttgccgcgaagctc
gactcggttccagccggtgcagcctggcatgccatccgggatctcgccctcgcctcccgc
gcctcctttgacgccaaggctgcctgccggctcgcgctggtcgcggagcgcaacaagacc
aacctggcctcgctggtgaagaacgcccgcgccatgctggacaagaacgccaagtccgcc
tggcagaccccggacggcgcctacttcgcctgtggcggcgctcccggcaagctcgggatg
ctgttcccgggccagggatcgcagtacaccgggatgctgaacgatctcgcctgccgtttc
ccgcaggttctcgactcggtcaccgccgccaaccaaggattcggctgcaccggcggcagg
atgctttccgacctgatctaccccccctccgccttcgatgaggagaccagcgcgaaacag
gaagaggcgcttcgtgccacccaggccgcgcagccggccatcggcgccgcaagcctcggc
gcactgcgcgtgctgcaggctttcggcctgaatcccgatgccgttgccggccacagctac
ggcgaactcaccgcactgtgcgccgccgggaggcttaacgaggacgcgctgcacgagctc
tcccgcctgcgcggcaagctcatgggtgcgggggatggcgacaaggggagcatgctcgcc
gtctcggcgccgcttgccaggatcagcgaagtggtcgcagccgagaagctcgacctcgtg
atcgcgaacaagaacgcaccggcacaggcggtgctctccggcgccagcgccgagatcaaa
cgtgcggtccccatcttcaaggcgctcggcctgacctgcaaggaactgccggttgcggca
gctttccacagcgcgctggtcgccgacgccgccaaacctttcctggccgcgctggaaaag
atcgacatgccgcaggccgggatcccggtctacgccaataccacggccgccgtgtacccg
tcggatgtcgccgctgccaaggcgcagctcgccgcccaactggcgaagcctgtcgagttc
gtcgccgagatcgaggcgatgtacgcggcaggtatcaccaacttcgtcgaggtgggcccc
ggcaaccggctgaccggactggtgcaggcgatcctcggtgaccgtccgcatctcgccttc
gctgtcgacgcctcttccggcaagcgtgccggcgtggccgatctcgcccgcgtgctggcg
cagttggcggtgctcggttacggcgtcaacctcgccctctgggacgaagggcaccgccct
gccccggcgccgaccggcaagaaaccggccttgaccatcccgatctgcggcgccaactac
gtgaaggcgaagccgaagaagccgccggtcctgccgaagcctgccgttgcagcgccggtt
cagaccgtcgccgctcccgtgcagccgcagccggcagcccaggttcaggccgcagccgcc
accgtgcagccgcagacgggctaccagagtgccgctcctgccaacccggcacagggcacc
tgccaaccccaggctgttcagcccgcttcgcagggtgccctgaccgagtcgctgcggctt
gcccgtgaagggatggcggtcctgcagaaaatgcaggaggacaccgcgctgctgcaccgc
cgtttccttgaaggccaggaagtcgctgccaaaaccttccaggcgcttctcgcgcagcaa
cagcatctcatcatgggtgctcccgtcggtcaggccgctccggtagcgttcgcgcccgtg
gcacctgctccggcagccccggtgcaggcgcaggcgtacgtggctccgaccccggtagcc
ccccctgctcccgttcaggctgctccggctccggcaatgcctgcggctgccccagtcgtc
tcagcggctccggctgcccccgccgctccggttgccccggctgcatccagcaacaccgac
gcagctcgcatcacccagacccttctcaacgtcatctctgagaagaccggctaccccatc
gaaatgcttgaactcgatatggggatggactccgacctcggcatcgactccatcaagcgc
gtcgagatcctctccacgctgcaggatcgtctccccggcactcccgtcatcgggccggag
cacctgggcaccctgcgcaccctgggagacatcgccgggcatcttgccgccggagcagct
agcgccgttgctgccccccctgtcgccgcagccgcagcctcagtcgcctccgtcgcagtt
cccgcaactggcgccgccactgcgcaggtcaccgagaccctccttgccgtcgtaagcgag
aagaccggttatccggttgaaatgcttgaactggacatggggatggactcggacctcggc
atcgattccatcaagcgggtcgagatcctctccacgttgcaggagcgcctgccgggttca
cccgccataggtccggaacacctgggtaccctgcgcaccctgggtgacatcgcgggccat
cttgcggcaggctctgtttcggccgccgcttttgcccctgccgccgctgcccctgccgct
gcggttgccgttcccgcagcaggcgttgaggcagcccaggtcaccgagacgctccttgcc
gtagtgagcgagaagaccggctatccggttgaaatgctcgagctcgacatggggatggac
tcggacctgggcatcgactccatcaagcgggtcgagatcctctccacgctccaggagcgg
ctccccggcactccggccatcggtcccgagcacctgggcaccctgcgtacgctgggcgac
atcgcaggccacctcgccgcaggcgccgtatccgcaccggcggctgtttccgtggctgtc
gctcaccaaacagcacccgcaactcccgctggcgacatcaccgctgtcctcctggaggtg
gtgagcgagaagaccggctaccctgtcgagatgcttgaacttgagatggggatggactcc
gacctcggcatcgactccatcaagcgcgtcgagatcctctccaccctgcaggagcggctc
cccggcaccccggccatcggtccggagcacctgggtaccttgcgcaccctgggcgacatc
gccggccacctcggttccggcgatgtcgcccctgctgcagtctcggaacccgcagcgccc
gcgcccggaacgcccgtccccgccgcggccacctccgccgccgcagtcgatcctgcagcg
gtcacgcaggcgctgctggaagtagtcagcgacaaaaccggctacccggttgagatgctg
gaactgaccatggggatggattccgatctcggcatcgattccataaagcgggtcgagatc
ctctccaccttgcaggagcgcctccccgcctgcccggctatcgggcccgagcatctgggg
accctgcgcaccctgggcgacatcgctcatttcctcgccggcccggcaaaacaggctccc
tccgcaatcgaggccgttgctcttccggccacccctgccgacgccgcccccgcggcaccg
gtcgccgagccggttcaggccgcgccacaggcgatccagcgcagttccgtggtaccggtt
cttctgggcgagaatgacgacgccgacgccatcacccttgccaacgacggcgagatctgg
gtcaccgacgacggctccgccttcgcagccgagctttccggcatccttctcgagcacggc
tgctccgtgaggaaggtcgacgcgtcgcaggcacggcagatcgcgcccgccgggaaactc
tcaggactggtgatctgcgctccggttgccggcaccgatgaccagttcctggaagacgcc
ttccagctcctcaagaacgcctccgccgcccttctcgagtcaggtcgcagcgaaggcgcc
gtctgcatcacagtctcccgtctggacggcgcattcggttttggttccggcaagtccctc
aaggatcccctttccggcggactggcaggattggccaaaaccgcggccttcgagtggcct
gaagtcgcctgcaaggccatcgaccttggtgaattcccccatccggcagccgcagcaggc
gctgtagccatcgaaatgctgcgcagcggtccggtcgagatcggactgaccccggaggga
cgtttcgcgctgcagagcgccgtgctccccaccgctgccgccccggtcgtccctgccatc
gccaaaggtgacgtcgtggtcatcaccggcggcgggcgtggcgttaccgccgtatcggcg
ctcgcgctggcgaaggaatatcaccccttcctggttctgctgggtcgcagctccgagccg
caggaggaacccgcctggctcttgggcctgaccgaagaggccgacatcaaacgcgccatc
atgcagaacgcggtcggcaaactccacccgcgtgagatcgaggagcgttaccgctccgta
gaggcgggacgcgaactgaccgccaccctggagagcatcgcggctaccggcgccgaggcc
atctaccgttcggtggacatccgggaccagagcgccatggaattgcttcttggcgaggtg
cgccgcgcccacggtcccatccgcggcgtggtccacggagcaggcgtccttgccgaccgc
ctcatcgtggacaagaccccggagcagttcgaacaggtctacagcaccaaggtgcatggc
ctgcgcgccctgctgcacgcgacccgcaacgacgacctgaagttcatcgcgctcttctcc
tcctccaccggccgtttcgggcgcgtgggacaggtggactacgcggtcgccaacgaggtg
ctgaacaagaccgcccaggccgaggcgcgccgccgctccggctgccgttgcgtcagcatc
aactggggcccctgggacggcggcatggtcacccccgcgctcaagaaggtcttcgcctcc
gaagggatcggcgtgatcggcctcgccgaggggggcgacttcctggcccgcgagatctcc
gcagccgaggcaccggtcgagatcgtcgccatagcgcaacttcccgagcaggtgagcgct
gcagcaccggcgaccagcaagcatctgagcctctccgaagccttctcgctgacgctcacc
gtgcccgagtatcccttcctgcgctcccacgtgctggacggcaaggccgtgctccccatg
gccgtcatcgtcgagtggctcgcccacggcgcgctgcacggcaatccgggcttccgtttc
cacggtttcaacgacctgcgcatctgcaagggtgtcgtcttcgaggacaacacccccttc
accctgaacgtgatggcgggacgggccgaaaagcgcgagtcgttctggctggttccggtg
gagctctccagtcccggcgtgaacggcaagaccatcctgcacgcccgcgccgagatcgtg
ctcgccaccaggcaccccgagggtatccgttccatcaccgagatccccaacaccccctac
gcaccgcatgacggggtcatctacaacagcgagcgcctgttccacggcccggacctgcac
ggcatcgagcatgtcgacggctgctccgccaaggggatctccgcttcggtgaagggcgct
ccggcgccggccaagtggatcaggcgtcctttgagaagcgcctggctcaccgatccgctg
gttctcgacagcgctttccagatgatgatcctctggagcttcgagcgctttggcgccggt
tcgctcccctgcttcgccgggcgctaccgccagttccaggagtccttcccgcgtgagggg
gtgcaggtggtgatccgcgtcatctccgagaccaggcatggcgccagcgccgacatggag
ttcctggaccgcaatagcggcaagctggtggcacgcctcgaaggttacgagtgcgtcatc
gatccctccctcaagcaggccttccagcgcaacaagctgcggaccgtaacggttgtgggg
gcggcatag
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