Geobacillus sp. JS12: A0V43_04100
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Entry
A0V43_04100 CDS
T04412
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
gej
Geobacillus sp. JS12
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gej03000
]
A0V43_04100
Transcription factors [BR:
gej03000
]
Prokaryotic type
Helix-turn-helix
Other families
A0V43_04100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF
AAA
HTH_7
HTH_28
HTH_50
Mg_chelatase
AAA_2
HTH_11
AAA_3
HTH_23
HTH_22
HTH_29
Mga
HTH_30
IclR
HTH_17
nSTAND3
AAA_16
Xre-like-HTH
TIP49
Motif
Other DBs
NCBI-ProteinID:
AMQ22517
UniProt:
A0A142D665
LinkDB
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Position
819247..821088
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AA seq
613 aa
AA seq
DB search
MNVMDPSKREIWRRFVQEGTLDQARISKRIEESWYLCRQKNVDPYDGKGKMFLTGRLLLE
RREKNQRLLRCAVPILEKLQQLFQEIPAIFLLIDQEGYVLWAKGHQQAMKKAKEINFLEG
VKWTEEEVGTNAIGTALRTREPIAVVGLDHYAVASQQWVCSAAPIYDENKEFLGIIDMSY
PIYHGLSDAQDYVLATIVAASYTIEQQLRIQQKENLLELFRHGFQMEDSASYSVVCDDQE
NIVWANHRLRSFCSSIIDQPLQQFCQRTWKVFSKVPIFSSVYGHLIGYKVTLQKAQDEEA
FFCSLPSFRFDGVIGTSPSFAAVLRSCSKVAKTDATVYLSGETGTGKELIARAIHQNSLR
KDGPFVAVNCGAVPKELIGSELFGYVEGAFTGAKRTGYMGKFVQAHGGTLFLDEIGEIPL
EMQVALLRVLQEREVVPIGGTKPISVDVRVITATHRDLYELVKEGKLREDLFYRLHVYPI
KLPALRERKEDIPFFVDYYCRKNGWNVCLPNSVMNLLMDYYWPGNIRELFNVLERMRIEY
GEAVPPISGIKSMLVALKNDEKGRGELTYREQVEKEQMMNMLEETKGNISKMAELLGISR
STCYRKLKKYKLI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgatggatccatcgaagcgggaaatttggcgtcggtttgtccaagagggaacg
ttagatcaagcgagaataagcaaaagaattgaagagtcgtggtatctttgccgccagaaa
aacgtggatccttatgatgggaaagggaaaatgtttttgactggccgtttattgctggaa
agaagggaaaaaaatcaaaggttgctccgttgtgctgttccgattttggagaagttgcaa
caattatttcaagaaattcctgcgatttttctccttatcgatcaagaagggtatgtgttg
tgggctaaaggacatcaacaggcgatgaaaaaggcgaaagaaatcaattttttagaggga
gtcaaatggacggaggaggaagtcgggacgaatgccattggtacagccttaaggacgaga
gaaccgattgcggttgtcggactcgatcactatgcagttgcttcccaacaatgggtttgt
tccgcggctccgatttacgatgaaaacaaagagtttcttggtatcattgatatgtcctac
ccaatctatcacggtttgtccgacgctcaagactatgtacttgccacgattgtcgccgcc
tcctacaccattgagcagcaactgcgaatccaacagaaagaaaatctattggaacttttc
cgccacggttttcaaatggaagattcggcttcttactcagttgtatgtgatgatcaagag
aacattgtgtgggccaatcatcgcttgcgttcattctgttccagcatcatcgaccagccg
ttgcaacaattttgccaacgaacgtggaaagtcttctccaaagttcccattttttcttca
gtttacggtcatcttatcggctataaagtaactttgcaaaaagcacaagacgaggaggct
tttttttgctccctgccatcattccgctttgacggggtgattggaacaagtccgtctttt
gctgctgtgttaagaagttgttctaaagtagcgaaaacggatgcaacggtttatctctca
ggggaaacagggacaggaaaagagttgattgctcgggcgattcatcaaaacagcctgcgg
aaggatggcccatttgtcgccgtcaattgcggagcggttccgaaagagctcatcgggagc
gaattgtttgggtatgtggaaggggcgtttactggcgcaaagcggacagggtatatggga
aaatttgtccaagctcacggtggaacgcttttcctagacgagatcggtgaaattccacta
gaaatgcaagtagctttgttaagagtgttgcaagaaagagaagtcgtgccaattggcgga
accaaaccgatttctgttgatgttcgggtcatcacagccacacaccgcgatttgtatgag
ttggtaaaggaagggaagttgcgagaagatctgttttatcgtttgcatgtatatccgatc
aagctcccagcgttaagggagcggaaagaggatatcccgttttttgttgactactattgc
cgaaaaaacggttggaatgtttgtttgcctaattcagtgatgaacttattgatggactat
tattggcctgggaacatcagggaattatttaatgtgttggaacgaatgagaattgagtat
ggagaggcagtccccccgatttctggaataaagtcaatgcttgtagcgttgaagaacgac
gagaagggaagaggcgagcttacctatcgggagcaggtggaaaaagaacaaatgatgaac
atgcttgaagagacgaaaggaaatattagcaagatggcggagctattaggcatttctcgc
agcacgtgctatcgcaagctgaaaaagtacaaattgatttga
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