Geothrix sp. PMB-07: Q9293_04375
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Entry
Q9293_04375 CDS
T09655
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
gep
Geothrix sp. PMB-07
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gep02000
]
Q9293_04375
Transporters [BR:
gep02000
]
Other transporters
Pores ion channels [TC:
1
]
Q9293_04375
BRITE hierarchy
Motif
Pfam:
OmpA
PagL
Motif
Other DBs
NCBI-ProteinID:
WLT32568
UniProt:
A0AA50DXK8
LinkDB
All DBs
Position
1009914..1011086
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AA seq
390 aa
AA seq
DB search
MRIALPMLLVALSANLSAESDPFTWAQVQLAYLSQQNSACVKDSTGLGLGFGQWLQPRWG
WEATYVHSRIEPTSHLWKANEDHLDATALFRPFLDTGRWIPFVRAGAGASRLANPLSLSG
TTTTRLNLLLGVGTQVWFGTRGMGSLEVRSVTVESSTQRQELEALVGIGFRWGGRSRATA
PVPPPAPDPAPIPPPTAPVPVVATTPEPAPVPAPAPVPAPVPAPVPEPAPVAPVLPAKIV
LSDAILHFPNNGDALGQEAIQAIEAVAQQVKAYPGEYSLVVGGHTSSLGSKAHNKALSLR
RAQSVARVLIAAGVPADKVSSEGFGPDKPLADNATREGQSRNRRVEIDVKTAQTVEKTHA
ETGVVEAPAQPKAKAIKPTKASKAAPKAKS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgcccttcccatgctccttgttgccctctctgccaacctctcggctgagtcc
gacccgttcacctgggcccaggttcagctggcctatctttcgcagcagaattccgcctgc
gtgaaggactccacgggcctcggccttggtttcggccaatggctgcaaccccgctggggc
tgggaagccacttacgtccacagccgcattgagcccaccagccacctctggaaggccaat
gaggatcacctggatgcgaccgcgctctttcgtcccttcctggatacgggccggtggatt
ccctttgtccgcgcgggcgcaggggcctcccgcctggcgaatccgctgtccctcagcggc
accaccaccacgcgcctgaacctgctgctgggcgtgggcacccaggtatggttcggcacc
cggggcatgggctcgctggaagtgcgctccgtcacggtggagagttccacccagcggcag
gaattggaggctctggtgggcatcgggttccgctggggcggaaggtcacgggccacggca
cccgttccgccaccggccccggatccggctcccatcccacctcccaccgcaccggtcccg
gtggtggcgacaacgccggaacccgctccggttcccgcaccagcgcctgttcctgcaccg
gttccagctccagttccggagccggctcccgtggccccagtccttccggccaagatcgtg
ctgagcgatgccatcctgcacttcccgaacaatggcgatgccctgggccaggaggccatc
caggccatcgaggcggtcgcccagcaggtgaaggcctaccccggcgagtacagcctggtg
gtggggggacatacctcaagcctgggcagcaaggcccacaacaaggccctgtccctgcgc
cgggcccagtcggtggcccgggtgctgatcgccgcaggtgttcctgcggacaaggtgtcc
tctgagggtttcggcccagacaagccgctggcggacaatgccacgcgggaaggccaaagc
cgcaaccgccgggtggagatcgatgtcaaaacggcccagaccgtggagaagacccacgcc
gagacgggtgtggtggaggccccggcccagccgaaggccaaggcgatcaagccgaccaag
gcctcgaaagctgcaccgaaggccaaatcctga
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