Geomonas oryzisoli: KP004_00175
Help
Entry
KP004_00175 CDS
T07282
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase family protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00521
Streptomycin biosynthesis
ger00523
Polyketide sugar unit biosynthesis
ger00541
O-Antigen nucleotide sugar biosynthesis
ger01100
Metabolic pathways
ger01110
Biosynthesis of secondary metabolites
ger01250
Biosynthesis of nucleotide sugars
Module
ger_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KP004_00175
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KP004_00175
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KP004_00175
Enzymes [BR:
ger01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KP004_00175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Cupin_2
T4BSS_DotI_IcmL
Motif
Other DBs
NCBI-ProteinID:
QWV93644
LinkDB
All DBs
Position
complement(43850..44308)
Genome browser
AA seq
152 aa
AA seq
DB search
MIVGVIVKELVTHADDRGFFREIIRASDDFFAEGFGQWSHSLMYPGVAKAWHIHKVQIDW
WYVGSGVLKAVLHDTREESATYGETMEILMGENQQAKVLRIPPGVAHGCKCLLGPVNLFY
VTSRVYDPADEGRLAHDDAAIGYDWLKQTPIT
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgggagtcatcgtcaaggagctggtcacccacgccgacgaccggggctttttc
agggagatcatccgggccagcgacgatttcttcgccgaagggttcgggcagtggagccac
tccctcatgtatcccggcgtagccaaggcctggcacatccacaaggtgcagatcgactgg
tggtacgtgggcagcggcgtgctgaaggccgtgctgcacgacaccagggaggagtccgcg
acctacggagagaccatggagatcctgatgggagagaaccagcaggccaaggtgctgcgc
atcccgcccggcgtcgcccacggctgcaagtgtctgctcggcccggtgaacctcttctac
gtcacctcccgcgtctacgatccggcggacgaaggacgcctggcacatgacgacgctgcc
atcggctacgactggctcaagcagacaccgatcacctaa
DBGET
integrated database retrieval system
