Geomonas oryzisoli: KP004_00550
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Entry
KP004_00550 CDS
T07282
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KP004_00550 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ger01007
]
KP004_00550 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ger03016
]
KP004_00550 (alaS)
Enzymes [BR:
ger01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
KP004_00550 (alaS)
Amino acid related enzymes [BR:
ger01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
KP004_00550 (alaS)
Transfer RNA biogenesis [BR:
ger03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KP004_00550 (alaS)
Prokaryotic type
KP004_00550 (alaS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Seryl_tRNA_N
Kbp-5
Motif
Other DBs
NCBI-ProteinID:
QWV93714
LinkDB
All DBs
Position
complement(127909..130536)
Genome browser
AA seq
875 aa
AA seq
DB search
MTGKEIRAQFFNFFQKKGHTLVESSNLIPKNDPTLLFTNAGMNQFKDVFLGLEKRDYNRA
VSSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWEFLTVDLGLS
KDRLYVTVYNDDDEAADIWHTQEGVPRERIYRFGEKDNFWAMGDTGPCGPCSEIFWDNGP
GTGCGSPDCAVGCDCDRYMEIWNNVFMQFNRDKDGTLTPLPKPSVDTGMGLERISAVMQG
VTSNYDTDLIQGIIRHIETICGKKYRADEKDDVSMRVIADHSRATTFLICDGVLPSNEGR
GYVLRRIMRRAARHAKMLGVSEPMLYKVVDAVNMMMGDAYPELLEREHYVKKVIKAEEER
FIETLDRGLAILNEETAALKGKGETVLSGEVIFKLYDTYGFPVDLTADIVEAEGLTLDED
GFALCMEKQRVKARENWKGSGEQGLAAIYKELHGSGITSEFVGYAEQTAYSTVSAIVKGG
VLVEEANAGDEVEIVTAKTPFYGESGGQAGDTGTISTGAAHVEVESTSRPFTDLIVHRGK
VVSGNIRNGEAVDLKVASANRSATARNHTATHLLQAALREVLGDHVKQAGSLVTPDRLRF
DFTHFSPMTAEEIRRVEVLVNGHIMQNDSVDAREMPAAEALAAGATALFGEKYGDVVRVV
RVGDVSSELCGGTHVHGAGEIGFFKIISEAGIAAGVRRIEAQTGHGALAVVHQMEDEQRS
IATLLKAEGVSTLDRVEKLLAGQRELQKELDALQAKVNASKSADLIQQVREQNGVKILAV
KVDGDAKGLRELSDTLKDRIGSGIIVLGAGDAVKANLLVAVTSDLTSRWKAGDIIKAIAP
IVGGNGGGKPELAQAGGTKPENLAEALEAVYRIVG
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcaaagagatcagggcgcagttcttcaacttctttcaaaaaaagggtcacacc
ctggtggagagctcgaacctcatcccgaaaaacgacccgaccctgctgttcaccaacgcg
ggcatgaaccagttcaaggacgtgttcctgggccttgagaaacgcgactacaacagggcc
gtctcctcgcagaaatgcgttcgcgccggcggtaagcacaacgacctcgagaacgtgggc
cgcaccgcgcgccaccacaccttcttcgaaatgctcggcaacttctccttcggggactac
ttcaagaaggaagccatcgctttcgcctgggaattcctcaccgtcgacctcggcctctcc
aaggaccgcctctacgtgacggtctacaacgacgacgacgaagcggccgacatctggcac
acccaggaaggggtgccccgcgagcgcatctaccgcttcggcgagaaggacaacttctgg
gccatgggcgacaccggcccctgcggcccctgctccgagatcttctgggacaacggcccc
ggcaccggctgcggctccccggactgcgccgtcggctgcgactgcgaccgctacatggag
atctggaacaacgtcttcatgcagttcaaccgcgacaaggacggcaccctgacgccgctt
ccgaaaccctccgtcgacaccggcatgggcctggagcgcatctccgccgtcatgcagggc
gtcacctccaactacgacaccgacctcatccaggggatcatccgccacatcgagacgatc
tgcggcaagaagtaccgcgccgacgagaaggacgacgtctccatgcgcgtcatcgcagac
cactcccgcgccaccaccttcctgatctgcgacggcgtgctcccctccaacgagggtcgc
ggctacgtgctgcgccgcatcatgcgccgcgccgcccgccacgcgaagatgctgggcgtg
tccgagccgatgctctacaaggttgtcgacgccgtcaacatgatgatgggcgacgcctac
ccggaactgctcgagcgcgagcactacgtgaagaaggtgatcaaggcggaggaggagcgc
ttcatcgaaaccctggaccgcggcctggccatcctcaatgaggagaccgctgcgctcaag
ggcaagggtgaaaccgtgctctccggcgaagtgatcttcaagctctacgacacctacggc
ttcccggtcgacctcaccgccgacatcgtcgaagcggaagggctcaccctggacgaggac
ggctttgcactgtgcatggagaagcagcgcgtcaaggcgagggagaactggaaaggctcc
ggcgagcaggggctcgccgccatctacaaggaactgcacggctccggcatcaccagtgag
ttcgtgggctacgccgagcagaccgcctactcgaccgtgagcgccattgtgaagggaggc
gtgctggtcgaagaggccaacgccggggacgaggtcgaaatcgtcacagccaagaccccc
ttctacggcgagtccggcggccaggctggcgacaccggcaccatctccaccggcgcggca
cacgtggaagtggaaagcaccagccgcccgttcaccgacctcatcgtgcaccgcggcaag
gtggtttccggcaacatccgtaacggcgaggccgtcgacctgaaggtcgcctcggcgaac
cgctccgcgaccgccaggaaccataccgcgacccacctgttgcaggcggcgctgcgcgag
gtgctgggtgaccacgtcaagcaggccggctccctggtcaccccggaccgcctgcgcttc
gacttcacccacttcagcccgatgaccgcagaggagatccgcagggtcgaggtcctggtc
aacggccacatcatgcagaacgactccgtcgacgcccgcgagatgccggctgccgaggcc
ctggccgcaggcgccaccgccctcttcggcgagaagtacggcgacgtcgtacgcgtggtg
cgcgtgggcgatgtctcttccgaactctgcggcggcacccacgtacacggcgccggcgag
atcggcttcttcaagatcatctccgaggcgggcatcgccgcgggggtcaggcgcatcgag
gcccagaccgggcacggcgccctggccgtggtgcaccagatggaagacgagcagcgcagc
atcgcgacgctcctgaaggccgaaggtgtcagcaccctggatcgcgtggagaaacttctg
gccggccagcgcgagctgcagaaggagctcgatgcgctgcaggcgaaggttaatgcctcc
aagtccgccgacctcatccagcaggtgcgcgaacaaaacggcgtcaagatcctcgcagtc
aaagtcgacggcgacgccaaggggctgcgcgaactctccgacaccttgaaggaccgcatc
ggctcgggcatcatcgtcctgggcgccggagacgccgtcaaggcgaacctgctggtcgcg
gtcacctccgacctcacctcgcgctggaaggcaggcgacatcatcaaggccatcgccccc
atcgtcggcggcaacggcggcggcaagccggagctggcccaagcgggcggcaccaagcca
gagaacctcgccgaggcactcgaggcggtgtaccgcatcgtagggtag
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