Geomonas oryzisoli: KP004_16620
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Entry
KP004_16620 CDS
T07282
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00470
D-Amino acid metabolism
ger01100
Metabolic pathways
ger01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KP004_16620 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KP004_16620 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ger01011
]
KP004_16620 (alr)
Enzymes [BR:
ger01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
KP004_16620 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
ger01011
]
Precursor biosynthesis
Racemase
KP004_16620 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
QWV92784
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All DBs
Position
complement(3777592..3778731)
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AA seq
379 aa
AA seq
DB search
MDSRPTVVEIDLAALRHNFGLVQKKVPQGCGILAVVKADAYGHGFQYVSEELEKLGVDAF
AVAFLAEGVQLRMSGIYRPVLILGGVYPGEERRCIGLNISTALYSLEQAAALDRAALEIK
CYRKAKIHLKVDTGMGRLGVTWDNVPEFLEQLKQFKNLEMEGIFSHFASADELDPDGLAF
TKLQAERFNAAVVEARRQGFDPRYVHVANSAAILAADLPFCNLVRPGIILYGAAPSRDFA
DENSALPVMKLKSRVAMLKWVEPGTSISYGRRYVADKRALIASVPVGYADGYCRSLTNKG
EALIRGQRARVAGTVCMDWIMLDVTDIEGVAVGDDVTLLGPDPMGDRISAEELAQKAGTI
PYEIMCGIATRRVRRVYIG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcgtccgacggtggtcgagatagatctcgccgcactcaggcacaacttcggg
ttggtccagaagaaggtgccccaggggtgcggcattcttgccgtggtcaaggctgatgcc
tacggccacggtttccagtacgtttccgaggagctggagaagctcggggtggacgccttc
gccgttgccttcctggcggagggcgtgcaactgcgcatgagcggcatctaccggccggtg
cttatcctgggcggggtctatcccggcgaggagaggcgctgcatcgggttgaacatctcc
accgcgctctactcgctggagcaggcggccgcgctcgaccgggcggccctggagataaag
tgctaccgcaaggcgaagatccacctgaaggtcgataccggcatgggacgcctcggcgtc
acctgggacaacgtgcccgaattcctcgagcagttgaagcagttcaagaacctggagatg
gaagggatcttctcccacttcgccagtgccgacgagctcgatccggacggcctcgccttc
accaagcttcaggccgagcgcttcaacgccgcagtcgtcgaggcgaggcgccagggattc
gatccccgttatgtccatgtcgccaacagcgccgccattctcgccgccgatctacccttt
tgcaacctggtacggccgggcatcatcctctacggcgccgcgcccagccgcgatttcgcc
gatgaaaactcagcgttgccggtcatgaagctgaagagccgggtggccatgctcaaatgg
gtggagcctgggaccagcatcagctacggcaggcgctacgtcgccgacaagcgtgcgctc
atcgccagcgttcccgtgggctacgccgacggttattgccgcagtctcaccaacaagggt
gaggcgctgatccgcggccagcgggcgcgcgttgccggcaccgtctgcatggactggatc
atgctcgacgtgaccgatatcgagggggttgccgtgggggatgacgtgacactcctggga
cccgaccccatgggcgaccgcatctcagccgaggaactggcccagaaagccggcaccatc
ccttacgagatcatgtgcggcatcgccacccgccgcgtgcgcagggtgtatattgggtaa
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