Gemmata sp. SH-PL17: VT84_19070 Help Entry VT84_19070        CDS       T04358                                  Symbol uvrA_1 Name (GenBank) UvrABC system protein A   KO K03701   excinuclease ABC subunit A Organism ges  Gemmata sp. SH-PL17 Pathway ges03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ges00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     VT84_19070 (uvrA_1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ges03400]     VT84_19070 (uvrA_1) DNA repair and recombination proteins [BR:ges03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      VT84_19070 (uvrA_1)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       VT84_19070 (uvrA_1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter ABC_tran SMC_N UvrA_DNA-bind AAA_21 nSTAND1 RsgA_GTPase AAA_16 AAA_29 Viral_helicase1 AAA_25 DnaJ_CXXCXGXG HypA Motif Other DBs NCBI-ProteinID:  AMV26509 UniProt:  A0A142XHJ8 LinkDB All DBs Position complement(4446416..4451602) Genome browser AA seq 1728 aa AA seqDB search MFVCVTGVSGSGKSSLINDVLRYGMRNLERGTESEEETEEVDEVSTSSSELRAQIEGTEH IDKVIDIDQTPIGRTPRSNPATYIKLWDEIRSLYAEMPDAKVRGYQPGRFSFNKPGGRCE ACEGNGANKLEMDFLADVWVQCPVCEGRRFNRETLQVKYRGKTIQDVLEMEVAEALGHFE HVPKIRLMVQTLHDVGLDYIKLGQPSPTLSGGEAQRIKLAKELVRRSTGKTLYILDEPTT GLHFEDVRKLLEVLHGFAEQGNTVLVIEHDLDVVKTADWVIDLGPEGGSGGGQIVVAGTP ETVAKSAQSYTGQALAPLLGSTKKATNGKKKSAKAAPSTGQEYITHLCVEGACQHNLKNV SARLPREKMSVFCGPSGSGKSSLALDTIYAEGQRRYVESLSSYARQFLGQVQKPRVEHVT GLSPAISIEQKTTSKSPRSTVGTVTEIYDYLRILFARLGQRHCPNCSRPVGTQTADEIVD KVLSLPEGTKLYIMAPLERKGQEKYDTLFDEIRRAGFTRMRVNGKSYTIDEPPQIDHRRK HNVEVVVDRNVVKPGTRTRIAEAVEQSLDLGRGVMHIAYVEADVDETKWKVEKFSQHLAC EHCNLSFEPLNPHHYSFNSPLGWCPTCEGLGFQRGANANLLVGDTKLSLRAGAVTAWPSL EKGSPWLPFAEALAKHVGFSLDTPFGKLDPAHQRAVLHGTGDAWVELSAEPGTRSAELKT KGKKSAPAAQRSHAPRFQYKGLFPAVDEASRVSWVYRQRLDHLVDEVPCSACRGARIRSD AAATRFVGLTLGELCAKSLGDTLGMFDALKLSKTERQVAGEVLREIASRLKFLVDVGLDY LTLARQGPTLSGGEAQRIRLASQIGSGLTGVLYVLDEPTIGLHPRDNERLLQALHRLRDL GNTLVVVEHDREVIAAADHLLDFGPGAGDRGGEVTASGTPKQIAKSAESLTGKYLSGKLA IPVPTNRRTAEGSRNLTPQPPSPLLSPVLSAELPADRRQRKGEKTKKAAQVPAPVLSPSP IGGGVGEGLPSVAARSPYGHALSILGARQHNLKNVDVHIPLGAFVAVTGVSGSGKSSLVN EVLYNTLARKLHRARTAGAAHDDIQGLEFVDKIINVDQDPIGNSPSSNPATYTGVFELIR ELFARLPESKVRGYHPRRFSFNQKGGRCEACEGMGQKVIEMHFLPDVWVECDTCNGTRYN PETLAVRYHGKSIADVLNMRISEALELFNNIPKIRHVLQTLEDVGLGYMALGQPAPTMSG GEAQRVKLAAELARPSTGKTLYLLDEPTTGLHFDDIRKLLEVLQRLVDLGNTVITVEHNL DVIKTADWIIDMGPEAGSGGGQVVAQGVPEEVVKQFDAGAPTHTGRILKGVIEAGPFAER QKFDPKAALAKREGDLDISDVGKDQKLPWEADGPGWHTRDRVTTTGKPVKWDGEALSWVI DLIHELGTFPDTKWNHRSVVEIPTPRKADGWFLHAMTGHEAYMKLVFPLPGRPFKQDQLA AKLAIPPLSDTPGLEGYSRDANRVEVHNASGWQTITITVHKKSEIDTPAFREFLTRAVEI IQGLNDTSAGGIEGNMPWKKDGEKWHLGDTGFPPGRGAKWDRAILPRLVKLLRDIDPTLT LKWDVRDAVTVYPKGMSRFWVRLKTKESDALEVWFTGRRGSAKLSQYENFGRNVTVEGDR ADGSEVLKLWLVTGNHLDTGALKPLLTEHLKAFRKAFGNGASSEKEAG NT seq 5187 nt NT seq  +upstreamnt  +downstreamnt gtgttcgtgtgcgtgaccggcgtgagtggctcgggcaagtcgtcgctgattaatgacgtg ctccgctacgggatgcggaacctggagcgcggaaccgaaagcgaggaagaaaccgaagaa gtcgatgaagttagcacttcgagttccgagcttcgcgctcagatcgagggcacggagcac atcgataaggtcatcgacatcgaccagacgccgatcggccgcaccccgcgctcgaacccg gcgacgtacatcaagctctgggacgagatccgctcgctgtacgcggaaatgccggacgcg aaggtgcgcgggtaccaacccggccgcttcagtttcaacaagcccggtggccggtgcgag gcgtgtgaggggaacggtgcgaacaagctcgaaatggattttctcgcggacgtgtgggtg cagtgcccggtctgcgagggccggcgcttcaaccgagaaacgctccaggtgaagtaccgc ggtaagacgatccaggacgtgctggaaatggaggtggcggaggcgctcgggcacttcgag cacgtcccgaagatccggctgatggtccagacgcttcacgacgtcggtctcgactacatc aagttgggccagccgtcacccacactctcgggcggcgaagcccagcgcatcaagctcgcg aaggaactcgtccggcgcagtaccggaaagacgctttacatcctcgacgaaccgacaacc gggctccacttcgaggacgtgcgcaagctactcgaagtgctccacgggttcgccgaacag gggaacaccgtgctcgtgatcgagcacgacctcgacgtagtgaagaccgcggactgggtg atcgatctcggccccgaaggaggttccgggggcggccagatcgtcgttgcgggcacgccg gaaacagtcgcgaagtccgcgcagtcgtacacgggccaggcactcgcaccgctgctcggt tccaccaagaaagccacgaacggcaagaaaaagagtgctaaagccgcgccgagcacgggc caggaatacatcacgcacttgtgcgtggaaggcgcctgccagcacaatctcaagaacgtg tcggcccggttgccgcgcgagaaaatgagcgtgttctgcgggccatcggggtcgggcaag tcgtcgctcgcgctcgacacgatctacgccgagggccagcgccggtacgtcgaatcgctc tccagttacgcgcggcagttcttggggcaggttcagaagccgcgtgtggagcacgttaca gggctgtccccggccatcagtatcgaacagaagacgacgagcaagagcccgcgcagcacg gtcggcaccgtcaccgagatttacgactacctgcggattctgttcgcccgactcggccag cgccactgcccgaactgctcgcggcccgtgggtacgcagaccgcggacgagatcgtcgat aaggtgctgtcgctcccggaagggacgaagctctacatcatggccccactggagcgcaag gggcaggagaagtacgacacgctcttcgacgagatccggcgcgccgggttcacgcgcatg cgcgtgaacggcaaaagctacaccatcgacgaaccaccgcaaatcgaccaccgccgcaag cacaacgtcgaggtcgtggtcgatcgcaacgtggtgaagcccggcacccggacccgcatc gcggaagcagtcgaacagtcgctcgatctcgggcgcggggtcatgcacatcgcttacgtc gaagccgacgtcgatgaaaccaagtggaaggtcgagaaattctcgcagcacctcgcgtgc gagcactgcaacctgagcttcgagccgctcaacccgcaccactactcgttcaacagcccg ctcggttggtgccccacgtgcgaggggttggggttccagcgcggcgcgaacgccaacctg ctcgtcggcgacacgaagctctcgctccgcgccggcgcggtgaccgcgtggccgtcgctg gagaaaggctcgccgtggctgccgttcgccgaagcgctcgcgaagcacgtcggcttctcg ctcgacacgccgttcggcaaactcgacccggcccaccagcgcgcggtgcttcacggaacg ggcgacgcctgggtcgagctgagcgcggaacccggaacgcggagtgcggaactgaaaacc aaaggcaagaaatcggctcccgcggcgcaacgatctcacgctccgcgtttccagtacaag ggactgttcccagcagtagacgaagcctcgcgcgtgtcgtgggtgtaccgccagcgcctc gaccacctcgtagacgaagtgccctgctccgcctgtcgcggcgcgcggattcgttccgac gcggccgccacgcggttcgtggggcttacgctcggcgaactctgtgcaaaatcgctcggc gatacgctcggcatgttcgatgcgctcaagctgtcaaaaacagaacgacaggtcgcgggc gaagtgctgcgtgagatcgcgtcgcgcttgaagttcctcgtggatgtcggcctggattac ctcacgctcgcgcgacagggtccgaccctctcgggtggtgaggcgcaacgtattcggctc gcgtcgcaaatcggcagcgggctgacaggcgtgctgtacgtgctcgacgagccgacgatc gggctccacccgcgcgacaacgagcgcctgcttcaagcactgcaccgcctccgcgacctc ggtaacacgctggtggtcgtcgagcacgaccgcgaggtgattgcggccgccgaccacttg ctcgacttcggccccggcgcgggcgaccgcgggggcgaagtcaccgcgagcggcacgccc aagcagatcgccaagagcgcggagtcgctcaccgggaagtacctgagcggcaaactcgcg atcccggtcccgacgaaccggcgcacggcggaggggagtaggaacctaaccccccaaccc ccttcgcctctcctctcgccggtcctgtcagcagagcttcccgcggaccggcgccaaagg aagggggagaaaaccaaaaaagcagcgcaggttccggcgccggttttaagcccctctccc attgggggaggggttggggaggggttgccttccgttgccgcacggtcgccctatggtcac gcgctcagcatcctcggcgcgcgacaacacaacctcaagaacgtcgacgttcacattccc ctcggtgcattcgtcgcagtgacgggggtgagcgggtctgggaagtcgtctcttgtaaac gaggtgctctacaacacgctcgcacggaagctgcaccgggcgcgtaccgcgggcgcggcc cacgacgatattcaggggctggaattcgttgacaagatcatcaacgtcgaccaagacccg atcggcaactcgccgtcctcgaaccccgcgacctacaccggggtgttcgagctgatccgc gaactgttcgcgcggctgcccgaatcgaaggtgcgcgggtaccacccgcggcgcttcagt ttcaaccaaaagggcgggcggtgtgaggcgtgcgaggggatgggccagaaggtgatcgag atgcacttcctccccgacgtgtgggtggagtgtgacacctgcaacggcacgcggtacaac cccgaaacgctcgcggtgcggtaccacggcaagtccattgccgacgtgctgaacatgcgg atcagcgaggcgctcgaactcttcaacaatatcccgaaaatccggcacgtgctccaaacg ctcgaagacgtgggcctcgggtacatggcgctcgggcagcccgcgcccacgatgtccggc ggcgaagcgcagcgcgtgaagctcgccgcggaactcgcgcgccccagcaccgggaagacg ctctacctgctcgacgaaccgacgaccgggctccacttcgacgacatccgcaagctgctc gaagtgctccaacggctggtcgatctgggcaacacggtcatcacggtcgagcacaacctc gacgtcatcaagaccgcggactggatcatcgacatgggaccggaggccggtagtggaggt ggccaggtggtcgcgcaaggcgtgccggaagaggtagtcaagcagttcgatgcaggtgcc ccgacccacaccgggcgcatcctgaagggcgtcattgaagccggcccgttcgccgagcgc cagaagttcgacccgaaggccgcgctcgccaagcgcgagggcgacctcgacatctccgac gttggcaaggaccaaaaactcccctgggaagccgacggcccgggttggcacacacgggac cgcgtgacgaccaccggaaaacctgtaaagtgggacggcgaagcactgtcgtgggtgatc gacctcattcacgaactcggcacgttccccgatacgaagtggaaccaccgcagcgtcgtg gagatcccgaccccgcgcaaggccgacggctggttcctccacgcgatgaccgggcacgaa gcgtacatgaagctcgtgttcccgctcccgggtcggccgttcaagcaggatcaactcgcg gcgaagctcgcgatcccgccgctctccgacacaccggggctggagggctattcgcgcgat gccaaccgcgtcgaggtccacaacgcatcgggctggcaaacgatcacgatcaccgtccac aagaagtccgaaatcgatacgcccgcgttccgcgagttcctcacgcgggccgttgaaatt atccagggcctcaacgacacgagcgcgggcgggatcgagggcaacatgccctggaagaag gacggcgagaagtggcacctcggcgatacggggttcccgccgggtcgaggcgcgaagtgg gaccgcgcgatcctcccgcggctcgtgaaactgctccgggacatcgacccgacgctgacg ctcaagtgggacgtgcgcgacgcggtgaccgtgtacccgaaggggatgtcccggttctgg gtccgcctcaagaccaaagaaagcgacgcactcgaagtgtggttcacgggccggcgcggg tcggcgaagctctcacagtacgagaacttcggccgcaacgtgaccgtcgagggcgaccgc gcggacgggagcgaggtactgaagctgtggctcgtgaccggcaaccacctcgacaccgga gcgctgaaaccgctcctcacggagcacttgaaagcgttccgcaaggcgttcgggaacggg gcttcgagcgagaaagaagcagggtaa

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