Gemmata sp. SH-PL17: VT84_34940
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Entry
VT84_34940 CDS
T04358
Symbol
sigE_60
Name
(GenBank) ECF RNA polymerase sigma factor SigE
Organism
ges
Gemmata sp. SH-PL17
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_28
HTH_23
HTH_29
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
AMV29644
UniProt:
A0A142XS52
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Position
complement(8130188..8132695)
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AA seq
835 aa
AA seq
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MRTAAAVYRELIPDRRTDGELLAAFISERSEPAFIELVRRHGPLVWGACRRLLPDPADAE
DAFQAAFLVLVRRAHQAARNGSVGPWLHRVAVWTARNARRKNARRLARQHALVEDAPLFA
PDGDLRADIDGALLALPARYRDPIILCHLQGYSRREAAERLGCAEGTLSAWLNRGLAKLR
TRLRDFDPTKVLPVLAAGAVPAALAASTARAAAVSTVAAVTVTPAVSSIVEGVLQMLWMK
KATAASFALCAVFAMGVGVGLGTRPSYTGAVAQDGDPVTGVAVAPSNDPKPKPNAQPNPK
ANPQPKPNPLSPDDLAAIEAQARRAEAELRRLAELRKQTETEIAAATAELQALKRYLDRV
KGTEKSGARTADEIVALEKVIREKEALLKGGGLRDIDVANLIEKKLALDQLQKNVGAKAE
DLKALREEIAKLDRAENFQDHKALREEIARQPKIEKPDVAKELKALKDDELALQNKLKLA
TDLKLKEEKLGALLHAEKTVAAKEIAALEEATRAKEAQHQALLTALKSLGNSKLADPNEA
TALKGVIEQLQKSADTSAAELKSLKDQLAKLKSAKPIQEQRTEKEAKEVKEKLQERNKDK
ELKEKIQERNKDKELKDKEIDQNKALAEIQAQLERLVAEKQRLVAQSKATEKQIADAEAA
LREYQRKTQLMLAEKMLAEKRVAEASRKTITSGGYIELTIAGKAGAFEFTITEVPAGDGK
ARGLQAKYGPVTTRDPAALAVLLARAKKDAGGPQEVRVIAQPQTVLGAGPVAALEACDKA
GYKTVKFTGYVFGGGFATELKSDQKGEVRGYKRLDGTEVRPKELAEEIQEGLRRL
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgccgctgccgtttaccgcgaactgatcccggaccgccgaaccgacggcgaa
ctgctcgccgcgttcatttccgaacggtccgaacccgcgtttatcgaactcgtccgccgg
cacgggccactcgtttggggtgcctgtcggcgcctcttaccggacccggccgacgcggaa
gatgcgttccaggccgcgttcctggttctcgttcgtcgcgcgcatcaggccgcacgcaac
ggctcggtggggccgtggttgcaccgcgtggcggtgtggaccgcgcgcaacgcccgacgc
aagaacgcccggcgcctcgcccggcagcacgcgctcgttgaagacgccccgctgttcgcg
cccgatggcgacctccgggcggacatcgacggcgccctgctcgcccttcccgcgcggtac
cgcgatccgatcattctgtgtcacttgcagggctattcgcggcgcgaagcggccgagcgc
ctggggtgcgcggagggcacgctctcggcgtggctcaaccgcgggttggcgaagctccgc
acgcgcctccgtgactttgatccaacgaaagtgctacccgtcttggcggcgggggcggtg
ccggcggcactggcagcgagcaccgctcgcgcggccgccgtgtccaccgttgccgcggtg
accgtcacccccgccgtttcctcgatcgtcgaaggagtgctccaaatgctctggatgaag
aaggcaacggccgcgtcgttcgcgctgtgcgccgtgttcgcgatgggggtcggggttggc
ctgggcacgcgcccgtcgtacaccggcgcggtggctcaggacggcgatccagtgactggg
gtcgcagtcgcaccctcaaacgatcccaagccgaagccgaacgcacagccgaatccgaaa
gccaacccacagccgaagccgaacccgttgtcgccagacgatctcgccgcgatcgaggcg
caagctcgccgcgcggaggccgaactgcgtcggctcgccgagcttcggaagcagacggag
acagagattgccgccgccaccgcggagttgcaggcgctgaagcggtatctggatcgagta
aaagggaccgagaagtcgggggcgcgtaccgcggacgagatcgttgcgctggaaaaggtg
atccgggagaaggaagctctgctcaaaggcggcggtttgcgggatattgatgtggcgaac
cttatcgagaagaagctggcgttggatcagcttcagaagaacgtaggcgccaaagctgag
gatctgaaggcactcagagaagagatcgccaaattagatagggccgaaaatttccaggac
cacaaggccctcagggaggagatcgctcggcagcccaagatcgagaagccggatgtcgcg
aaagagttgaaggcgctcaaagacgacgagctggctctgcaaaacaagctcaaactggcg
accgatctgaaactcaaggaagaaaagctcggcgcccttctgcacgccgagaagacggtc
gcagcgaaagagatcgcggcactggaagaagcgactcgggccaaggaagcacagcaccaa
gcactgctcactgctcttaaatccctggggaattccaaactagcagaccccaatgaagcg
actgccctcaagggtgtaatcgagcaactgcagaagtccgcggatacgtccgcggccgaa
ctgaagtcgctcaaagaccaactcgccaaactgaagagcgccaagcccatccaggaacag
cgcaccgagaaggaagccaaagaagtcaaagagaagcttcaagagcgcaacaaggacaaa
gaactcaaagagaagatccaggaacgcaacaaggacaaagaactcaaagacaaagagatt
gaccagaacaaggccctcgctgaaattcaggcgcaacttgagcggctcgtggccgaaaag
cagcggctcgttgctcaatcgaaggccaccgaaaagcaaatcgcggacgcggaagcggcg
ctccgggagtaccagcgaaagacccagttgatgcttgctgaaaagatgttggcggagaag
agggttgcggaagcgagccggaaaacgattacgagcggcgggtacatcgaactcaccatc
gcgggcaaagccggggcgttcgagttcacgatcaccgaagtgccggccggcgacggcaag
gcccgcgggctccaggcgaagtacggtccggtcaccacacgcgacccggcggccctggcc
gtgctgctcgctcgtgcgaagaaggacgccggcggcccgcaagaggtgcgcgtgatcgcg
caaccgcaaacggtgctcggtgccggaccggtggccgcgctggaagcgtgcgataaggcc
gggtacaagaccgtgaagttcaccgggtacgtcttcggcggcgggttcgcgaccgaactc
aagtccgaccaaaagggcgaggtgcgcgggtacaagcggctcgacgggaccgaggtgcgg
ccgaaggaactggcggaagagatccaagaggggttacgccggttgtaa
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