Gemmata sp. SH-PL17: VT84_35610
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Entry
VT84_35610 CDS
T04358
Symbol
lgrD_2
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
ges
Gemmata sp. SH-PL17
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Hexapep
PP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AMV29775
UniProt:
A0A142XSB8
LinkDB
All DBs
Position
complement(8288647..8292669)
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AA seq
1340 aa
AA seq
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MPNSVTAPRQSGAFPQYNGTGAEPRLLHEFFAHAARKWPDNVAIDAPPCAARPSRRTITY
AELDRRTDALAAYLREFVTGECVVAILLPRNAEHVYLAQLAAMKAGAAYVCIDPTFPDAQ
VGIILGDAKPVAVLTDTTGLGRVRRCAPAIGCALDVVAWADQPVTSVPPLPPAPWLTPHS
LAYLIYTSGTTGKPKGVMIEHAAIANLVRGDLETFPAAPEDRVAQNSSCAYDSSVEEIWM
ALAAGATLVVMDDDATHLGPDLAPWLRTEAVTVFCPPPTLLRTIGCDDPESALPDLKRIH
VGGEPLPRDVADKWAPGRCLVNDYGPTECAVVALRGIIHPGDTINIGRPVPGIQAWVLNE
HLEEVAPGESGELCLGGAGVARGYLNDAELTNRKFPTHPRLGRIYRTGDLVHRVADGTYI
CHGRIDTQVKIRGYRIELEAIESRLSARPDVREAACRVQGEGPQQQIVAFVVPVNPASPP
SFDVLKAALREQLPEYMVPAHFGLLAALPTAVSGKLDRRALPTLEIHAPEPHGRITDPRD
EIEERIATAVRRVFNLKDRVSVDHDFFNDLGGDSLRAAMLISALRDDPAMATLAVRDLYQ
TRTIEGLAQRVRNESGHANLHKPTEPTKRLNPLFATIVQSAWLLLGLMVTGPALYLLAFH
IVPDATASLGLAPFLLTTPLLYAAGICLYAIGSVVFAVLVKKVLIGRYEPIRAPIWGSFY
VRNWIVQQTARLIPWRFFDGTVFVSVILRALGAKVGRGVHISRGVALVHGGWDLLEIGDN
VTISRDATLRLVDLEDGQIIVGPISIGAGCTLDIRSGLAPNTRMEPDSYLASQGYALSGA
VLSRGTRWAGIPAVPAGEAPPAAQLPEGSHELSPVMHGVVLLGAKLLFTALAVLPVALAV
LLYAQVQGIDTAAATAWLLHPTISADQFVLSALVVVLIVPALLVSRCVSMRTLGKIPEGV
VSRWSYTYIRVLLKRDILDWANDWLNGTLLWRVWLRGAGMKIARDTELSTIFDTVPELVE
LGPGTFFADGIYLGAPHVHRGTVTLARTKLGAGVFLGNYAVIPIGQTIPDGVLLGVCTVA
DDRIITRGTSWFGEPPFELPKREIVEADARLTHKPSWIRYANRVFWELLRFALPLVPLVL
VATWFAVLEAVQPEVSLAVLAFAVVPALDLGFLVGLCLFGLALKWFLLGRVRPGTRMLWS
CWCSRWDFNYIAWHYLALAPMQALEGTVLLNGYLRALGVKIGKNVVVGDVFALVVDPDML
ELQDGATVSCLFQAHTFEDRVLKIDRVVIGKNSSVGIGAVLLYGCHIGDGTRVAGHSVVM
KRERLQPNHTYAGCPTHLLN
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacagtgtgaccgcaccgcggcaatcgggtgcctttccgcagtacaatggtacc
ggcgccgaaccgcgattgctccacgagttcttcgcgcacgcggctcgaaagtggccggac
aacgtcgccatcgacgccccgccctgtgccgcgcgcccgagccgccgcaccattacatac
gccgaactcgaccgccgaacggacgcgctggcggcgtatttgcgcgagttcgtgaccggt
gagtgcgtggtcgcgatcctgctcccgcgcaacgcggagcacgtctacctcgcgcagctc
gcggcgatgaaggccggcgccgcttacgtgtgcatcgaccccacgttcccggacgcacaa
gttggcattattctcggggacgcgaagcccgttgccgtattaacggatacgaccgggctc
ggccgggttcgtcggtgtgcccccgcgattgggtgcgcgcttgatgtggtggcgtgggcc
gaccagcccgtgacctctgttccgccgctcccaccggccccgtggctcacaccgcacagc
ctcgcgtacctcatctacacgtcgggcactaccggcaagccgaagggggtgatgatcgag
cacgcggccatcgcgaacctcgttcgcggcgacctcgaaacgttccccgcagcgcccgag
gaccgcgtcgcgcagaactcgtcgtgcgcctacgattcgtcggtcgaagagatctggatg
gcgcttgcggccggtgccacgctcgttgtgatggacgacgacgcgacgcacctcggcccg
gacctcgcgccgtggctgcgcaccgaggccgtcacggtcttctgtccgccgccgacgctc
ctgcgcacgatcgggtgtgacgatcccgaaagtgccttaccggacctgaaacgcatccac
gttggcggggagccgctcccgcgtgacgtggccgataagtgggcgccggggcgctgcctc
gtgaacgactacggcccgaccgagtgcgcggttgtcgcgctccggggtatcatccacccc
ggggacacgatcaacatcgggcgccccgtacccggcattcaggcgtgggtactgaacgag
cacctcgaagaagtggcgccgggcgaatcgggcgaactttgcctcggcggtgctggcgtg
gcccgcgggtacctgaacgacgccgaactcacgaatcgcaagttccccacgcacccgcgg
ctcgggcgcatctaccgcaccggcgacctcgttcatcgtgtggccgacggcacgtacatc
tgccacggccggatcgatacgcaggtgaagatccgcgggtaccgcatcgaactggaagcg
atcgaatcgcgactttctgcgcgccccgatgtgcgtgaagcggcgtgtcgcgttcagggc
gagggaccgcagcagcaaatcgttgcgttcgtggtgcctgtgaaccccgcgtcgccaccg
tcgttcgacgtgctgaaagcagcgcttcgcgaacaactccccgagtacatggtgccggcc
cactttgggctactggccgcgctgccgaccgcggtgagtgggaagctagatcgtcgggca
ctgccgacgctggaaattcacgcgccagaaccgcacggccgcattaccgacccgcgcgac
gagatcgaagagcgcatcgcgaccgcggttcgtcgcgtgttcaatttgaaggatcgcgtt
tcggtcgatcacgactttttcaacgacctcggtggcgattcgctccgcgccgcgatgctg
atctctgctctgcgcgacgatcccgcaatggccaccctcgctgttcgtgacttgtaccag
acgcggacgattgaaggactggcacagcgcgttcggaacgagagcggccacgcgaacctc
cacaaaccgaccgaacccaccaagcggctgaacccgctgttcgcaacgatcgtgcaatct
gcctggttgttgctcgggctgatggttaccggtcccgcgctctacctactggcgttccac
attgtcccggatgctacggcgagtttgggcctggcgccgttcctactcacgacgccgctg
ctctacgcggccggtatctgcctgtacgcgatcggctcggtggtcttcgccgtgctggtg
aagaaagtgctgatcggccggtacgagccgattcgggcaccgatttgggggagcttctac
gtccgcaactggatcgtgcaacaaaccgcgcggctcatcccctggcggttcttcgacggc
accgttttcgtgagcgtgatcctgcgggcgctcggcgcgaaggtcgggcggggtgttcac
attagccgtggggtcgcgctcgttcacggtgggtgggatctgctcgaaatcggcgacaac
gtgaccatcagtcgcgacgcgacactgcgcctcgttgacctcgaagacgggcaaatcatc
gtcggcccgatttcgatcggcgccggttgcacgctcgacatccgttccggactcgcgccg
aacacgcgcatggagccggacagttacctcgcgtctcagggctacgcgctctccggggcc
gtgctttctcgcggaacgcgctgggctggaatccccgccgtgcctgcgggtgaagctccg
cctgccgcgcagttgccggaggggagccacgagctttcgccggtaatgcacggcgtcgtg
ctactcggcgcgaaattactattcaccgccctcgcggtccttccggtcgcgcttgcggtg
ttgctgtacgcacaggtacagggaatcgataccgctgcggcgaccgcatggttactgcac
cccacgatcagtgccgatcagttcgtgctttccgcgctcgtggtcgtgctcattgtccca
gcgctgctcgtatcacgatgcgtctcgatgcgcacgctcgggaagatccccgagggcgtg
gtcagccggtggagttacacctatatccgcgtgctgctgaagcgggacattctggattgg
gcgaacgactggctcaacggcacactgttgtggcgcgtgtggctgcgcggcgcgggtatg
aagatcgcacgcgacaccgaactgagcacgattttcgacactgtgccggagttggtcgaa
ctcggtccgggtaccttcttcgcggacggcatttatctcggcgccccacacgttcaccgc
ggaacggtcactctagcgcgcacgaaactcggcgccggcgttttcctcggcaactacgcc
gtcatcccgatcggtcaaacgatcccggacggtgtgctcctcggagtctgcaccgttgcg
gatgatcgcatcatcacgcgcgggacgtcgtggttcggggaaccgccgttcgagctgccg
aagcgggagatcgtggaggccgacgcgcgcctgacgcacaagccctcgtggattcgttac
gcgaaccgtgtgttctgggaactgctgcggttcgcacttcctctggtgccgctggtgttg
gtcgcgacgtggttcgcggtgctggaggcggttcagcccgaagtttcgctcgcggtcctc
gcgttcgccgtggtgccggctctcgacttggggttcttggttgggttgtgcctgttcggg
ctggcgctgaagtggttcctgctcggccgcgtgcgcccgggcacgcgcatgctctggtcg
tgctggtgcagccggtgggacttcaactacatcgcgtggcactatctcgcgctcgctccg
atgcaggcactcgaaggcaccgttctgctaaacggctacctgcgtgctctgggtgtgaag
atcgggaagaacgtcgtcgtgggtgacgtgttcgcactcgttgtggatcccgacatgctg
gaacttcaggacggcgcgactgtgagttgcttgttccaggcccacacgttcgaggaccgc
gtgctcaagatcgaccgggtcgtgatcgggaagaactcgtcggtggggatcggtgcggtg
ctgctctacgggtgccacatcggtgacggcacccgtgtggcggggcacagcgtggtgatg
aagcgcgagcgcttgcagcccaaccatacctatgccggttgcccgacgcacctgttgaac
tga
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