Geothrix oryzae: GETHOR_06500
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Entry
GETHOR_06500 CDS
T09137
Name
(GenBank) hypothetical protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
gex
Geothrix oryzae
Pathway
gex02020
Two-component system
gex02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GETHOR_06500
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GETHOR_06500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gex03021
]
GETHOR_06500
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gex02035
]
GETHOR_06500
Transcription machinery [BR:
gex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GETHOR_06500
Bacterial motility proteins [BR:
gex02035
]
Flagellar system
Flagellar assembly proteins
Stator
GETHOR_06500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Sigma70_ECF
HTH_37
ALP_N
Motif
Other DBs
NCBI-ProteinID:
BDU68549
UniProt:
A0AA48GFM0
LinkDB
All DBs
Position
complement(734922..735878)
Genome browser
AA seq
318 aa
AA seq
DB search
MSSPRSDPSAVPAPPLGSEAARAVEAAPAALRPWAALAAAKAYGKGAPPAVNPAVASPAA
APTAAADAAPGAAEAQEPPEPFDRENREQIIKDYVPLVKFVAHRVASRLPSHVELDDLIN
SGILGLMDAIEKFEPARNIKFKTYAELRVKGAILDGLRDLDWVPRSLRRKKKDIENAYHL
LEQQMGRAATDEEVAVHLGVPLEELHKNLDELKGVTLGTFVEVGEDGEGESLISFVPDPD
AEDPHQTFQATEIKDILRRAMEVLPKKEKFVVQLYYFDELTMKEIGTLLNITESRVSQLH
TKAMLRLRGKLLEKHIEG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccgaggtcggacccatccgctgtccccgccccgcctctcggcagtgaggcg
gcccgggccgtggaagccgcgcccgccgcgctccggccctgggcggccctggcggcggcg
aaggcctacggcaagggtgcgccccccgccgtcaatcccgccgtggcctccccggccgcc
gccccaacggcggcggcggacgccgcgcccggcgccgccgaggcccaggagccgccggaa
cccttcgaccgcgagaatcgcgagcagatcatcaaggactatgtgcccctggtgaagttc
gtcgcccaccgcgtcgcctcccgcctgccctcgcatgtggagctggacgacctcatcaac
agcggcatcctcggcctcatggacgccatcgagaagttcgagccggcccggaacatcaag
ttcaagacctacgccgagctgcgggtgaagggggccatcctcgacggcctgcgcgacctg
gactgggtcccacggagcctgcgccgcaagaagaaggacatcgagaacgcctaccacctg
ctcgagcagcagatgggacgggccgccacggacgaggaggtcgccgtccacctgggggtc
cccctcgaggagctgcacaagaacctggacgagctgaagggcgtcaccctgggcaccttc
gtggaggtgggcgaggacggcgagggggagagcctcatcagcttcgtgccagacccggat
gccgaggatccgcaccagaccttccaggccacggagatcaaggacatcctgaggcgggcc
atggaagtgctgcccaagaaggagaagttcgtggtccagctctactacttcgacgaactg
accatgaaggaaatcgggacgctcctgaacatcaccgagtcccgggtatcccaattgcat
accaaggccatgctgcgactccggggcaagctcctggagaagcacatcgaaggataa
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