Geospiza fortis (medium ground-finch): 102031692
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Entry
102031692 CDS
T03755
Symbol
COL6A2
Name
(RefSeq) collagen type VI alpha 2 chain
KO
K06238
collagen type VI alpha
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04510
Focal adhesion
gfr04512
ECM-receptor interaction
gfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102031692 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102031692 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102031692 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102031692 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
gfr00536
]
102031692 (COL6A2)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102031692 (COL6A2)
Glycosaminoglycan binding proteins [BR:
gfr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102031692 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
102031692 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
102031692
NCBI-ProteinID:
XP_005430688
UniProt:
A0A6I9HVC0
LinkDB
All DBs
Position
Un
AA seq
1020 aa
AA seq
DB search
MFRQALFPTLLCVALVPLHAAQLDVDGGDVSPTSCAEKRNCPINVYFIIDTSESVALQTV
PIQSLVDQIKRFIPMFIDKLESELYQNQVYITWQFGGLHYSDVVEIYSPLTSSKDIYLPR
LSAINYLGRGTFTDCAISNMTQQIQTQMANGVNFAVVITDGHVTGSPCGGMKMQAERARD
MGIKLFAVAPSEKVYEQGLREIANLPHELYRNNYAITQRDTLEIDVNTIDRIIQAMKHEA
YGECYKMSCLEIAGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGV
PGLKGEKGEIGSDGRRGAPGLAGRNGTDGQKGRLGRIGPPGCKGDPGDKGPDGYPGDAGD
QGERGDAGIKGDPGRPGRSGPLGPPGEKGSPGLPGNPGAQGPAGTKGRKGEVGPPGPKGE
AGRRGDPGTKGSKGTPGGIGERGDPGPEGNRGLPGEVGNKGARGEQGLPGPRGPSGAVGE
PGRIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGEL
GPKGVQGTKGEKGEPGDPGPGGEPGQRGPPGEAGPEGTPGPPGDPGLTDCDVMTYVRETC
GCCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVINVVSRLGSIAKDPKSQTGARVGV
VQYSHEGTFEAIKLDDERIDSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRRKK
AQVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQR
VQKMRLFSDLVAEEFIDKMEDVLCPDPQVVCPELPCQTELAVAQCTQRPVDVVFLLDGSE
RIGEQNFQSAHRFVEDVARQLTLARSNSDHMNARIALLQYGSERDQNVVFPLTHNLTEIS
DALAQIKYLDSSSNIGSAIIHAINNIVLSPGNGQRLARRNAELSFVFITDGITGSKNLEE
AINSMKKQDVMPTVVALGRDVDMDVLLKLGLGDRAAIFREKDYDSLSQPSFFDRFIRWIC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtttagacaagccttgtttcccactctcctttgtgtggctctagttcctctccatgcc
gctcagcttgatgtggatggtggagatgtcagtcctacctcctgtgcagaaaagaggaac
tgccccatcaatgtctacttcatcattgacacctcggagagcgtggctctgcagactgtg
cccatccagagcctcgtggaccaaataaagcgcttcatccccatgttcatcgataagctg
gagagcgagctctaccagaatcaagtctacatcacctggcagtttggtgggctccattac
tcagacgtggtagaaatttacagccccttgacaagcagcaaagacatttacctgcccagg
ctgtctgccattaattacctgggccggggcaccttcacggactgtgcaatctccaacatg
acccagcagatccagacccagatggccaacggcgtgaacttcgcggtggtcatcaccgat
ggccatgtaacgggcagcccctgtggggggatgaagatgcaggctgagagggcacgagac
atgggcatcaagctgttcgcggtggcccccagcgagaaggtgtacgagcagggtctgcgg
gagatcgccaacctgccgcacgaactctaccgcaacaactacgccatcacccagagggac
accctggagatcgatgtcaacaccatcgacaggatcatccaggctatgaaacacgaagcc
tacggcgagtgctacaagatgagctgcctggagattgcagggccacctggtcccaaggga
tacagagggcagaagggtgcaaaggggaacatgggtgagccaggttccccggggctgaag
ggacgacagggcgacccaggtattgaaggtccgatcggataccccggtcccaagggtgtc
ccagggctgaaaggagagaagggagaaattggatctgacggacggaggggtgcccctggc
ttggcaggaaggaatggcacagatggacagaagggcaggctggggagaattggaccacca
ggatgcaagggtgaccctggtgacaagggccctgatggctacccaggagatgcaggagac
caaggagaaagaggagatgcaggcataaagggggatcctggccggcctggtcgcagtgga
cccctggggcccccaggagaaaaaggaagcccgggacttccaggcaaccctggagctcaa
gggcctgctggaaccaagggaaggaaaggtgaagtgggacctcctggacccaaaggagag
gctgggcgacgtggagatccagggacgaaaggcagcaaaggcactcctggaggcatagga
gaaaggggagatcctggtccagagggtaatcgtggtctgcccggtgaggttggaaacaaa
ggagccaggggagaacaaggactaccaggacctcgaggcccttcaggtgctgtgggagag
ccaggcaggataggatcacgtggggaccctggtgacttgggcccaagaggtgatgctgga
ccaccaggaccaaagggtgacagaggcaggcctggctttagctaccccggacccagagga
cctcagggtgacaagggtgagaaggggcagccaggacccaagggaggacgaggcgagctt
ggaccaaaaggagtacaagggaccaaaggagagaagggggagccgggtgatcctggccca
ggaggagagcctggacagcgtggtccacctggtgaagcaggccctgaggggacccctggc
ccaccaggagatcctggtctgactgactgtgatgtgatgacctatgtgcgagagacgtgc
ggatgctgtgactgtgagaagcgctgcggtgccctggacatcatgttcgttatagacagc
tccgagagtatcggctacaccaacttcaccctggagaagaattttgtcatcaacgtggtc
agcaggctgggctctattgccaaggaccccaagtcacagacaggtgcccgtgttggggtg
gtgcagtacagtcacgaggggacttttgaagccatcaagcttgatgatgaacgcattgat
tctctgtcgagcttcaaggaagcagtgaagcgcctggagtggatcgctggaggcacctgg
acaccatctgcccttcagtttgcctacaacaagctcatcaaggaaagcaggagaaagaaa
gcccaagtgttcgctgtggtgatcacagacgggcgctacgacccccgggatgatgacaag
aacctcggggctctttgtggcagagatgtggtggtcaacaccatcggcataggcgacatg
ttcgaccagccggagcagagtgagaccctggtctctattgcctgcaacgaaccccagcga
gtccagaagatgaggctcttctcagacctagtggcagaggagttcattgacaagatggag
gatgtgctctgcccagatccacaggttgtctgccccgagctgccctgtcagacagagctt
gctgtagcccagtgcacccagcgccctgttgatgtcgtcttcttgctggacggctcagaa
aggatcggggagcagaacttccagagtgcccaccgcttcgtggaggatgtggcccggcag
ctgacgctggcccggagcaacagtgaccacatgaacgcccggatcgcgctgctgcaatac
ggcagtgagcgggaccagaacgtggtcttcccgctgacccacaacctcaccgagatctcc
gatgcgctggcacagatcaagtacttggactcgtcctccaacatcgggtcagccatcatc
cacgccatcaacaacatcgtgctcagcccaggcaacgggcagcgacttgcccggcgcaat
gccgagctctccttcgtcttcatcaccgacggcatcacgggaagcaagaacctggaggag
gccatcaactccatgaagaagcaagatgtcatgcccacggtggtggcactggggagggat
gtggacatggatgtcctgctgaagcttggccttggagacagggcagccatcttccgggag
aaagactatgacagcctctcccagcccagcttcttcgacaggttcattcggtggatttgt
taa
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