KEGG   Geospiza fortis (medium ground-finch): 102033091
Entry
102033091         CDS       T03755                                 
Symbol
YTHDC1
Name
(RefSeq) YTH domain containing 1
  KO
K20100  YTH domain-containing protein 1
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gfr03041]
    102033091 (YTHDC1)
Spliceosome [BR:gfr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    102033091 (YTHDC1)
SSDB
Motif
Pfam: YTH
Other DBs
NCBI-GeneID: 102033091
NCBI-ProteinID: XP_014167392
LinkDB
Position
Un
AA seq 744 aa
MQARAKQLAVPLNNCIYQISDTARSKRELTTKRALLGVSVTERTHLVPPSSVVMDYGELN
VLDDILTDAPDQDDELYNPDSEQDKSEKKGSKRKTDRMENAESKRQKPSVHSSRQMMPKP
PSSSVSNNKRIVSTKGKLVSEYKTEEYQRSDRNKRPGQPEKSYMRKRDIDRRAKSSTPDG
SERIRHDVDRRPSRSSHSSKEEVNSEEYCSDHETGSSGSSEQGNTENEEEGMEEEEDDEG
EEDEEVEEDGEEDEEEYEQDERDQKEGNDYDTRSEASDSDSESASFTDGSVRSGSGSDAS
DEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVQKGKTSKLKYILQD
ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR
LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG
RDGQEIEPECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQPRSRGRPSRRDPVRDVGR
RRPEDYDIHNSRKKPRIDYPPEFHQRPGYIKDPRYPEVDRRFSGVRRDVFLNGSYNDYVR
EFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYSGHHPVPHEARYRDKRVH
DYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDRGRDRERERERICD
RDRDRGERVSYGSMGECCYQVCKY
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgcaggctagggcaaagcaattagctgtccctttaaataactgtatctatcaaatctct
gacacagcaagatctaaaagggaactcactaccaagagagccctgttgggagtatctgtc
acagaaagaactcatttggtccctccctcttcagtggtgatggactatggtgaactgaat
gttctggatgacattttgactgatgctcctgaccaggatgatgagttgtataaccccgat
agtgagcaagacaaaagtgagaaaaagggatcaaaaagaaaaactgacaggatggaaaat
gctgaaagcaagaggcaaaaaccttctgtgcattcctcaaggcagatgatgccaaagcct
cccagttcatcagttagcaataacaagagaatagtgagtacgaaaggaaagctggtgtca
gagtacaagactgaggagtaccagaggtctgacagaaacaagcgcccaggacaaccagaa
aaatcttacatgaggaagagggatattgacagaagggcaaagtcttctacaccggatggt
tcagagagaatcaggcatgatgtggatagaagaccaagcagatctagccattcttctaaa
gaagaggtgaactctgaggaatattgttcagatcacgagactggcagtagtggttcctct
gaacaaggcaacacagagaatgaggaggaaggaatggaagaagaggaagatgatgaaggg
gaggaggatgaagaggtggaagaagatggggaggaagatgaagaagagtatgaacaggat
gagagggatcagaaggaaggaaatgactatgacacacggagtgaagccagtgattctgat
tctgaatctgcctctttcacagatgggtcagtcagatctgggtctggttcagatgcatca
gatgagaaaaagaaggagaggaagagagctagaggtatctctccaattgtttttgacaga
agtgggagttctgcatcagaatcatatgcaggttcagaaaagaagcatgagaaattatca
tcttccgttcgtgctgtccaaaaaggtaaaacaagcaaacttaaatacattctccaagat
gcaagattctttctcatcaagagtaataaccatgaaaatgtatcgcttgctaaggcaaag
ggagtatggtcaacacttccagtgaatgaaaagaagcttaatgctgcatttagatcagcg
aggagtgttattttgatattttctgtaagagagagtggcaaattccaagggtttgcaaga
ttatcttcagagtcccatcatggaggatcacctatacattgggtgctgcctgcaggaatg
aatgcaaaaatgttgggaggtgtctttaaaattgactggatttgcaggcgggaattgccg
ttcactaaatctgctcacctgaccaatccttggaacgaacataagccagtaaagattgga
cgcgatggacaggaaattgagccggaatgtggaacccaactttgccttctcttccctcct
gatgaaagtattgacttgtatcaagtcattcataaaatgaggcacaagagaagaatgcac
tcacaaccccgatcaagaggacgcccatcccgtcgagaccccgttcgggacgtgggaagg
cgtcgaccagaagattatgatattcataacagcagaaagaaaccaaggattgactatccc
cctgagtttcaccaaagaccagggtatataaaggatcccagatatcccgaagtagacaga
cgattttcaggagttcgacgagatgtatttttaaatgggtcctacaatgattacgtgagg
gagttccacaacatgggaccaccaccaccatggcaaggaatgccaccgtatccaggtatg
gagcaaccaccacaccacccttactatcagcaccatgcacctccacctcaagctcaccct
ccatactcaggacatcatcctgtaccccatgaagcgagatacagagacaaacgagtacac
gactatgacatgagggtagatgacttccttcgccgcacgcaagctgttgtcagcggtcgg
agaagccggccccgggagagggaccgagagcgggagcgcgaccggcctcgagataatcgg
agagacagagaacgggacagaggccgagatcgggaaagggagagagagaggatttgtgac
cgggacagagacagaggtgaaagagtttcatatggttcgatgggagaatgctgctatcaa
gtatgcaaatactga

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