Geospiza fortis (medium ground-finch): 102033306
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Entry
102033306 CDS
T03755
Symbol
KDM2A
Name
(RefSeq) lysine demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102033306 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102033306 (KDM2A)
04121 Ubiquitin system [BR:
gfr04121
]
102033306 (KDM2A)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102033306 (KDM2A)
Enzymes [BR:
gfr01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
102033306 (KDM2A)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102033306 (KDM2A)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
102033306 (KDM2A)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102033306 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102033306 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Cupin_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
102033306
NCBI-ProteinID:
XP_005431162
LinkDB
All DBs
Position
Un
AA seq
1076 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGK
DFTVEYIQRGGLRDPLIFRSSEGLGIKMPDPDFSVNDVRLCVGSRRIVDVMDVNTQRDIE
MSMAQWARYYETPEEEREKLYNVISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQN
LELYENWLLSGKQGDIFLGDRVSECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFL
HSFNIPMQLRIYSIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLS
MDMELSSSDSVNMEEEEEEDDDEDGAGKESRRPTTRRSILTSPIANGANVDYDELGKSCR
SSLPGLKKTPSMDSSDSSRGSQNGQAWEPSGGSPRKSRKVHLTQFELEGLRCLVDKLESL
PLHKKCVPTGIEDEDALIADVKLLLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVR
LPTIPITKPHTMKPAPRPTPVRSTVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMK
KFGGPGRMKQSCVLRQCLAPRLPHSVTCALCGEVDQNEDSQDFEKKLMECCVCNEIVHPG
CLQMDGEGLLNDELPNCWECPKCYQGDDTEKGQKRKVEESDDDTAQAKVLRPLRSCEGPL
TPPPNSPTPMLQLIHDPASPRGGVTRSSPGAGPSEHHSASRDERFKRRQLLRREEEEEEE
DENAEEGGAARLNGRGGRAQEGEESCVQREVWMSVFRYLTRRELCECMRVCKTWYKWCCD
KRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNRLPGLKDLILAG
CSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNRSKLRNMIDFRL
AGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNSLTELNMAGCNK
LTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgaggaagaacggatccgatacagccagagactgcgtggcacgatgaggcgg
cgttacgaggacgacggcatctccgatgatgagattgaagggaagaggacatttgacctc
gaggaaaagctgtccaccaacaagttcaactccactttcgtggtcttcatggaaggcaaa
gacttcacagttgagtacatccagcggggtggcctgagggacccgctcatcttcaggagc
tcggagggcctgggtataaagatgccggatccggacttcagcgtgaacgatgtgcggctg
tgtgtggggagcagacggatagtggatgtgatggatgtgaacacgcagcgggacatcgag
atgtccatggcacagtgggcgcgctactatgaaacaccagaggaggagcgggagaaactc
tacaacgtcatcagcctggagttcagccacaccaaactggagaacctggtgcagagacct
gctacggtggatttgattgactgggttgataacatgtggcccaggcacctgaaggaaagt
cagacagagtctaccaatgccatcctggagatgcagtatccaaaggtgcagaaatactgt
ttgatgagtgtcaagggctgctacacagatttccacgtggactttggtggcacttctgtg
tggtaccacatccaccgagggggaaagatcttctggctgatccctcccacaccccagaac
ctggagctctatgaaaactggcttctctcagggaagcagggagacattttccttggggac
agagtgtcagagtgccagcgcatcgagctcaagcagggctacacatttgtcatcccctca
ggttggatccatgctgtgtacactcccatggacacgctggtttttggcggcaatttctta
cacagcttcaacatccctatgcagctccggatctacagcatcgaggaccgcacacgggtc
ccaaataaatttcgttatcccttctattatgagatgtgttggtacgtgctggagcgttac
gtgtactgcatcaccagccgctcccacctgaccaaggacttccagaaggagtccctcagc
atggatatggagctgagctcctcggactcggtgaacatggaagaggaggaggaggaggat
gatgatgaggatggagcggggaaggaatcccggcgccccacgaccaggaggtccattctc
accagccccatcgccaacggtgccaacgtggactatgatgaactgggcaagagctgcagg
agcagcctgccgggtctcaagaagaccccatccatggactcttccgactccagccggggc
tcccagaacggccaggcctgggagccgagcgggggcagcccccgcaagagcaggaaggtg
cacctgacccagtttgagctggaggggctgcgctgcctcgtggacaagctggagtcgctc
cctctgcacaagaagtgtgttcccaccggcatcgaggacgaggacgccctcatcgctgac
gtcaagctgctgttggaagaatacgcaaacagcgaccccaaactggcacttacaggcgtc
cccatcgtccagtggcccaagagagataagctaaagctccaggcccggctgcgggtgcgc
ctgcccaccatccccatcaccaagccgcacaccatgaagccagcaccacgccccactccc
gtcaggtccacggtgtctcccatcgtgtcgggcgcccggcggaggcgggtgcggtgccgg
aaatgcaaggcctgcatgcagggcgagtgtggcatgtgccactactgcagggacatgaag
aagtttggcgggcccggccgcatgaagcagtcctgtgtcctccggcagtgcttggcgccc
aggttgcctcactcggtcacgtgtgcactttgcggggaggtggatcagaacgaggactcg
caggactttgagaagaagctcatggagtgctgtgtctgcaatgagatcgttcaccctggc
tgtctgcagatggatggggaagggctgctcaatgatgagctccccaactgctgggagtgc
cccaagtgctaccagggtgatgacacagagaagggccagaagcggaaggtggaggagagc
gatgacgacacggcacaagccaaggtgctgcggcccctgcggagctgcgaggggcccctg
acccccccgcccaactcgcccaccccgatgctgcagctgatccacgaccccgcgtccccc
cgcggaggggtgacccgctcatccccgggcgccgggcccagcgagcaccacagcgccagc
cgggacgagcgcttcaagcgccggcagctgctgcggcgcgaggaggaagaggaggaggag
gatgagaacgcggaggaggggggggcggcccggctgaacgggcgtgggggccgggcgcag
gagggcgaggagagctgcgtgcagcgcgaggtctggatgtccgtgttccgctacctcacc
cgcagggagctctgcgagtgcatgcgggtgtgcaagacctggtacaagtggtgctgtgac
aagagattgtggacgaagatagacttgagcaggtgcaagtccatcaccccgcaggcgctg
agcggcatcatcaaaaggcagccggtcagccttgacctcagctggaccaatatctcaaaa
aaacagcttacatggctcgtcaacaggctgccaggcctgaaagacctcatcctagcgggc
tgttcctggtctgcggtctgtgccctcagtacctccagctgcccccttctcaggaccctc
gatcttcggtgggcagtaggaatcaaggaccctcagatccgggacttactcacgcctcca
acagacaaacccagtcaggacaatcgcagcaaactccgcaacatgatcgacttccggctc
gccgggctggacatcacggacgccacgctgcgcctgatcatccgccatatgcccctgctc
tcccgcctcgacctcagccactgcaaccacctcacggaccagtcggccaacctcctcacc
gccgtgggctcctccacacgcaactccctcaccgagctcaacatggcaggctgcaataag
ctgacggaccaggccttgctgtacctgcgccgcatctccaacgtcaccctcatcgacctg
cggggttgcaaacagatcacccgcaaagcctgtgagcacttcatctcggacctgtccatc
aacagcctctactgcctgtccgatgagaagctgatccaaaaaatcagctag
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integrated database retrieval system
