Geospiza fortis (medium ground-finch): 102033536
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Entry
102033536 CDS
T03755
Symbol
TRIP11
Name
(RefSeq) thyroid hormone receptor interactor 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102033536 (TRIP11)
Membrane trafficking [BR:
gfr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
102033536 (TRIP11)
Retrieval pathways
102033536 (TRIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
Motif
Other DBs
NCBI-GeneID:
102033536
NCBI-ProteinID:
XP_014167342
UniProt:
A0A6I9Z9Y5
LinkDB
All DBs
Position
Un
AA seq
1785 aa
AA seq
DB search
MDFGDIIWSQQEINRLSNEVSRLESEVDHWKQIAVSSKVQGTNDAEQSEICKLQNVVKEL
KQNLSQEIDEHQHELSVLQDAHRQKLVELSRRHREELREYEERIEELENRLQQDGVSTDA
VDDPKIPEQKKKAQSPDGGQVEELQVVKDLEEEIRKLNHKLSSAKAENKNLLKEQEFDKL
EKIQIAQDYEKLKSDFDALQRSVAEQDALLKEQRQLQSKTSLPQDVVSLQQALLEAENEI
ARLSSLNQGLEKELTSAQHKHENILSSNTEDHNSEINQLRQDLKRKEHELDESVAERETL
IAELEELDKQNQEATQHMITLKEQLSKKHTETDSIIKQLKLDIDCERKKVSELETEKLNA
IKELDSQKEKLSHCSYALNDLHITKQQLQDNIKDLQEQLRKAQEYNSHSKKEIGELQQRL
KEREEELHVSLSKLTERSHEESNYTCQDLILKEREVEIAKLQNDVSENKQINEDLQKSLS
NLRIENGKLMAAIEELKQELSDAISEKKKVHLEKDTLVEALKMEKRQLESELNETEKRLL
EQARNYEQTIEELSKARSMDTSALQLEHERLVKLHQEKDFKLAELKKTIEQMELDHQETK
DMLTTSLGGQKQLTDLIKEKEEFIEKYKNQALQAKQELEEYMKVSKKQDVLKQNLEEKDR
SLAVMKEENNHLKEEIERLKDQQSRSTPVVEPKTLDIIIELESEVTQLKVIKNNLEEEIK
VHKKTIEDQNQATVKLQQSLQEQRKEIDESKLQCQQMNVTHERLFLEKDEEIKNLQKTIE
QIKTQLHKERQIIQTDASDLFQETKVQTLNGENGNEKHDLSKAEIERLVKGIKEREMEIK
LLNEKNVSLSQQIDQLSKDEVGKLTRIIQEKDLEIQALNARVSSASYRQDVLSLQQQLQA
YVLEREQVLAVLSEKTRENSQLKTEYRNIMDMVAAKEAALVRLQEENRRLSNRSENSSQD
MSRETIQNLSRIIREKDIEIDALSQKCQTLLTVLQTSSTGADNGAGGVNSNQFEELLQER
DKLKQQVKKMEEWKQQVITTVQNMQHESAHLQEELHRLQAQISVESDSTSRLQVDYNGLI
QSYEQNEKKLKSFSQELAQVQHSIGQLYNTKDLLLSKLDLVTPSVATAATVSQLSGVQCS
PPEALSEESKLLQNELEQLKKKLQEKDSTIRILQENNQRLSDSVATASEIERKSQEGTES
EMRQMKEKHDVLQKSLREKDILIKSKSDQLLSVSENLSNKENENELLKQAVTNLKERNLI
LEMDIRKLKEENEKIVARCREKETEFRALQETNMQFSMMLKEKEFESHSMKEKALAFEKL
LKDKEQGKTGELNQLLNEVKSMQEKAVTFQQERDQVMVALKQKQMETSALQSEVQHLHEK
EQRLNQELERLRNHLLEMEDSYTREALAAEDREVKLRKKVLILEEKLASSSTAVENASHQ
ASLQVESLQEQLNLVSKQRDETMLQLTISQDQVKQYALSLANLQMVLEQFQQEEKAMYSA
ELERHQKQSAEWKKKAENLEEKVVSLQESLEEANAALDAASRLTEQLDIKEEQIEELKKE
GEIRREMLEDMQNKLMNLMNSTEGKVDKLLMRNLFIGHFHTPKNKRLEVLRLMGSILGLK
KEELDQLLSEEQRGVTRWVTGWLGGGAGSKSVPSTPLRPTHQNIFNSSFSELFVKFLETE
SRPSLPPPKLSVHHMKPLGAVGTGKTSSTPPNSQMQDSPVSGMGRRPNANPFLAPRSAAV
PLITPASSSGHLLMKPISDALPTFTPLPVSPDASAGAVLKDLLKQ
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggattttggagatataatctggtcacaacaagaaataaacagattatccaatgaagtt
tccaggcttgaatcggaggttgaccactggaaacagattgcagtgtcttccaaagtgcaa
ggcacaaatgatgctgaacaaagtgaaatatgcaaactacaaaatgttgttaaggagctc
aaacagaatttaagtcaagaaatagatgaacatcagcatgagctgtcagtactgcaggat
gcccacagacagaaattagtagagttaagtcgtcgacaccgagaagagctgcgtgaatat
gaggagcgaattgaagaacttgagaatcggttacagcaagatggtgtgagcactgatgcc
gtggatgaccctaaaattcctgaacagaaaaaaaaagctcagagtccagatggaggacag
gtggaagagttgcaggttgtaaaggacctagaggaagaaataagaaaattaaatcacaaa
ttatcttctgccaaagcagaaaacaaaaatcttctgaaagagcaagaatttgacaagcta
gaaaaaatccaaatagcacaagattatgaaaagcttaaatctgactttgatgcacttcaa
aggtctgtggcagaacaagatgctctcctgaaagaacagaggcagctccagtcaaagacg
tcactaccacaagatgttgtcagcctacagcaagcattgttagaagcagaaaatgaaata
gcaagactttccagtttaaatcagggacttgagaaggaactgacaagtgcacaacataaa
catgagaatattctttcttcgaatacagaggatcacaattcagaaataaatcagttaaga
caagatttgaaaaggaaagaacatgaattagatgaaagtgttgctgaaagagaaacatta
atagcagaattggaagaactagacaagcagaatcaagaagctactcagcatatgattaca
ctgaaagagcagctgtcgaagaaacacacagaaactgatagtatcatcaaacagctgaaa
cttgacatagattgtgaaagaaagaaggtatcagaattggaaactgagaagttgaacgct
attaaagagttagatagtcagaaagaaaaactaagccactgttcatatgcacttaatgat
ttgcatataactaagcagcagctacaagacaatattaaagatcttcaggaacaattaagg
aaagcccaggagtataactcgcatagtaaaaaagaaattggagagttgcagcagagacta
aaagaaagagaggaggaacttcatgtatccttgagcaagttaacagaaagaagtcatgag
gaatctaactacacttgtcaagatctgattctgaaagaaagagaagtagaaattgcaaaa
ctacagaatgatgtttcagaaaacaaacaaataaatgaagatctccagaaatctctgtct
aatctcagaatagaaaatggaaagctgatggcagccattgaagaactaaaacaggagtta
agtgatgccatttctgagaaaaagaaagttcatttggaaaaagacactcttgtggaggct
ttgaaaatggagaaaaggcagttagagagtgaattaaacgagacagagaagaggcttttg
gaacaagcacgtaattatgagcaaactattgaggagttatcaaaggcgcgtagtatggat
accagtgccctgcagctcgaacatgagcgcctggtgaagcttcatcaagagaaagacttt
aaacttgctgagcttaaaaagaccattgagcagatggaacttgaccatcaagaaacaaag
gacatgttgactactagcttaggaggacaaaagcagttgacggatcttataaaagagaaa
gaggaattcattgaaaaatacaaaaatcaagccttacaggcgaagcaggaacttgaggaa
tatatgaaagtttcaaaaaagcaggatgtcttaaaacagaacttggaggaaaaagacaga
agtcttgcagtcatgaaggaagaaaataatcatttgaaagaagaaattgaacggcttaag
gatcagcaaagtagatctacacctgtggttgagcctaaaactttagatattattattgaa
cttgaaagtgaggtaacacagttaaaagtgataaagaataatcttgaagaagaaataaaa
gttcacaaaaaaacaatagaagatcagaatcaagcaacagtgaaacttcagcagtcgctg
caggagcagcgaaaggaaatagatgagtccaagctgcagtgtcagcaaatgaatgtcaca
catgaaagactatttttagaaaaagatgaggaaatcaaaaatttgcagaaaacaattgaa
caaattaaaactcagttgcacaaagagagacagattattcagactgatgcttctgatctt
tttcaggaaaccaaggttcagactcttaatggagaaaatggaaatgaaaaacatgactta
tctaaagctgaaattgaaagactggtcaaaggtatcaaggaaagggagatggagattaag
ctgttaaatgaaaagaatgtttctctaagtcagcaaattgatcagctctctaaggatgaa
gttggtaaacttactcggatcattcaagagaaagatttagaaatacaagctcttaatgct
agagtttcctcagcttcctacaggcaagatgttctttcccttcagcagcagctgcaagct
tatgttctggaaagagaacaagtactagcagttctaagtgaaaagacaagggagaacagt
cagttaaaaacagaatatcgtaatatcatggacatggtcgctgctaaagaagcagctttg
gtgaggttgcaagaggagaaccgaaggttatctaatagatctgaaaacagcagtcaagac
atgtctagagaaactattcagaatctatctcgtatcattcgagaaaaagacattgaaata
gatgccctaagtcaaaaatgccaaaccttactgactgtcttgcagacatccagtacaggt
gctgataatggggcagggggtgtgaacagtaaccagtttgaggaacttctgcaagaacgt
gataaactgaaacagcaagtaaagaaaatggaagagtggaaacaacaagtaataaccacg
gtccagaacatgcagcatgagtcagctcacctccaagaagagttgcacaggctgcaagca
caaatttctgttgaaagtgatagtacttcaaggctgcaggtagattataatggcttgatt
cagagttatgaacagaatgagaaaaagctgaaaagttttagtcaagaattagcacaagtt
caacacagcataggacagctttataacactaaggatcttctcctgagcaaactggatttg
gtaacaccatctgtggcaacagctgccaccgtttcacagctttcaggtgttcaatgcagt
cctcctgaagcactcagtgaggaatccaaactccttcaaaatgagttggaacaactgaaa
aaaaagttacaagaaaaagattcgactatcaggattcttcaggaaaacaatcagcgatta
tctgattctgttgctacagcatcagagattgaaagaaagagtcaagaaggaactgaatca
gagatgagacagatgaaagaaaaacatgatgtgttacagaagtcactaagagaaaaagat
atattaattaaatctaaaagtgatcagttactttccgtgagtgaaaatcttagtaacaaa
gaaaatgaaaatgagcttttgaagcaagctgtaactaatctaaaagaaagaaatttaatt
ttagaaatggatattcgaaaactgaaagaagaaaatgaaaaaatagttgcaaggtgcagg
gagaaagaaacagaatttcgtgcacttcaggagactaatatgcaattttcaatgatgctg
aaagagaaagagtttgagtctcactcaatgaaggaaaaagctcttgcttttgagaagctg
ttgaaagacaaagaacagggcaagacaggagaattgaatcagctgttaaatgaagttaaa
tcaatgcaggaaaaggcggttacttttcagcaagagagagaccaagttatggtagcactc
aaacagaagcaaatggagaccagtgccctgcagagtgaggtgcagcacttgcatgagaag
gagcagcgcctaaatcaggaactggagaggctgcggaatcaccttttggaaatggaagac
tcctacaccagagaggctttagctgcagaagacagagaggtcaagctaagaaaaaaggtt
ttgattttggaagaaaaacttgcatcctcatctactgcagtggagaatgccagccatcag
gctagtctgcaagttgaatctttgcaagagcagttaaacctggtttccaagcagagagat
gaaaccatgctgcagctgaccatctcccaggaccaagtgaagcagtatgcactgtctctg
gccaacctgcagatggtactagagcagttccaacaggaagaaaaagctatgtattcagca
gagctggagagacaccaaaaacagagtgcagaatggaagaagaaagcagaaaacctagaa
gaaaaagttgtatcactgcaggagagtttagaagaggcaaatgctgctctggatgcagca
tccaggcttactgagcagcttgacatcaaagaggagcagattgaagaacttaagaaagaa
ggtgagatcagaagagaaatgttagaagatatgcaaaataaattaatgaaccttatgaac
agcacagaaggaaaagtggataaactgctgatgagaaatctctttattggacattttcat
actccaaaaaataaacgtcttgaagtgttaaggttaatgggaagtatcttgggactgaaa
aaggaggaacttgatcagttactatctgaagagcaaagaggagttacaagatgggtgact
ggctggcttggtggaggagctgggtcaaagagtgttcctagtacacctttgagaccaact
catcagaacatttttaatagttctttttcagaactgttcgtgaaattccttgaaactgaa
tctcgcccaagccttcccccacccaagctctctgttcatcacatgaaacctttaggagca
gtaggaactggtaaaactagcagtactccacccaacagtcaaatgcaagattctccagtc
tcaggaatgggtagaagaccaaatgcaaatccatttttagcacctcgatctgcagcagtg
cctctcataacaccagctagtagttctggacatctgcttatgaaacctatttctgatgca
ttgcctacttttacaccactgccagtgtcccctgatgccagtgctggtgctgtattaaaa
gacctcctaaaacaatag
DBGET
integrated database retrieval system
