Geospiza fortis (medium ground-finch): 102034854
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Entry
102034854 CDS
T03755
Symbol
NIPBL
Name
(RefSeq) NIPBL, cohesin loading factor
KO
K06672
cohesin loading factor subunit SCC2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102034854 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102034854 (NIPBL)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
102034854 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
102034854
NCBI-ProteinID:
XP_014164570
UniProt:
A0A8N5ES10
LinkDB
All DBs
Position
Un
AA seq
2670 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTAHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNS
RHGSNEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGALKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPPEAGGATGGNRTASQETGSAGNGARPA
LMVSIDLQQAGRADSQATVTQDLDIIKKPEEIKQHNDVFVCVPQEDTVGVLKFKPENHPE
IFRKKSDFESQKTDIQQNENRQMEFQQNESRRLESKYNESKQLEVKHESRQMEMKQNENR
QTELKQNESRQIEMKQNEGKQNNGKQEIRQRPETPKQKSEGRPETPKQKSEGRPETPKHK
HDNRRDSSKPLSDKKIEIPRHKLDVKSDPSRMKPESRPDPTKPRPDGRSVSDTPRRDHDS
LKQRSEDRGESERYRGDPSKIRRPEYLRSSNKNEHDSKHGIKPDGSKPEKFERKYRHESG
DSRFSSGDQKSRPDSPRIKQEGKGDSSKSRPDKPGFKSPNSKDERRTDGNKSKVDSNKAH
GDNKAEFPSYLLGARSGALKHFVIPKIKRDKDGNITQESRKTEFRGEHKDKVEKIGLVED
LNKGAKPIVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSTKPNKGSIDQSVLKELPP
ELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDE
AWEYEEHDRRSSGDHRRSGHYHEGRRISGSGRYRNRSPDDSDMDDYSPPPSLSEVARKMK
KKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGDDDEIPQELLL
GKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEE
RLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYD
PVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQ
VSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNF
RLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEESNKKVDQDVLITNSYET
AMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLV
HQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSLARILKQVSGGDDEIQQLQK
ALLDYLDENTEIDASLVFSRKFYVAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETT
GQIMHRAESRKKFLRSIIKTTPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIY
LTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVE
LLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMI
RRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQ
NLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFS
KIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDL
MKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKNQHQEDPNSTIL
TANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAI
IGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADR
DWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHNQSSVRHFALNVIALTLNQGL
IHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINT
CPKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIAD
NLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPLSEEESESDSN
SGSGSESEAEASKPRRLRKRVDSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLL
LMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKI
TEEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAET
EDDESDGEDRGGGTSGVRRRRSQRISQRIT
NT seq
8013 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttacg
gaccttttgaaccagctgcctcttccatcacctttacctgctaccacaacaaaaagcctg
cttttcaatggacggatagctgaagaggtgaactgccttctggcttgcagggatgaaaat
ctggtttcacagcttgtccacagtctcaatcaggtgtcaacagatcacatagagttgaaa
gataaccttggcagtgatgatccagaaggagatataccagtcttgctgcaggctattctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagc
gggatgatgatgtcacagtttaatatttctcagaattccatgcgtggtagtcctgcatct
tcaaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacag
acaagctctggtaacagatttttggcacaacagaacagtccagtgcctagtccatatgct
cctcaaagccctgcaggatacatgccatattcacatcctccaagttatacagctcatcct
caaatgcagcaagcttctgtatccagtcccattgtcacagctgggatgaggaatctccat
gaaaataaagtttcaagtcagttgtctggaaattcagctaatcatcatgctgataattct
agacatggctcaaatgaagactacctacagatggtgcacagactcagtagtgatgatggc
gatccttcaataaggaatgctgcgtctttttccttgaggtcaccacagtcagtctgctct
ccagctggaagtgatggagcccttaaaggatcaagacaacctttaatccaacaatctcag
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagctctccttccaaggactccactaagcttacatta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccactaaacgctgctcagtgtttg
ccgcagcatgaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacaacctcaaactcctgtggtacagacacagcaacaggtttcg
caacaaggagctataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataagcctctaaagaagcgaaaacaagaaaacaagccaccagaggctggaggtgctact
ggaggaaatagaacagcttctcaggagacaggttctgcaggaaatggggcacggccagca
ctgatggttagtattgatctgcagcaagcaggaagagcagactctcaggcaacagtaact
caagatttggacatcatcaaaaaacctgaagaaattaagcagcataatgatgtgtttgtg
tgtgttccccaagaagacactgttggagttcttaaatttaaacctgaaaaccatccagaa
atatttaggaaaaagtcagactttgaaagtcaaaagacagatatccagcaaaatgaaaac
agacaaatggaattccagcaaaatgagagcagacggttggaaagtaaatacaatgagagc
aagcagttagaagtgaaacatgaaagcagacaaatggaaatgaaacaaaatgagaacaga
cagacagaattgaaacaaaatgagagcaggcaaatagagatgaaacaaaatgagggaaaa
caaaataatggcaaacaggaaatacggcaaaggccagaaacaccgaaacagaagagtgaa
ggcagacctgaaacaccgaaacagaagagtgaagggaggcctgaaacacctaaacacaaa
cacgataataggagggactccagtaaacctttgtcagacaagaaaatcgaaatacctagg
cacaaactagatgtgaaatctgatccttcaaggatgaaaccggaaagtcgacctgatcca
acaaaaccgaggcctgatgggcgctcagtttctgatacaccaaggcgtgaccatgacagc
cttaaacaaagatctgaggacaggggggagtcagagagatacagaggagatccatccaag
atcagaaggcctgaatatttgagatcctcaaacaaaaatgaacatgattctaagcatggt
attaaacctgatggttcaaaacctgagaaatttgaaaggaaatataggcatgagtctggt
gattcaaggttttcttctggggatcagaaatcaaggcctgacagccctcgtattaaacag
gaaggtaaaggggattctagcaaatcaagacctgataaacctggtttcaagtcaccaaac
agcaaggatgaacgaaggacagatggtaataagagtaaagtagatagtaataaagcacac
ggtgacaataaagcagagtttcccagttatttgttgggggcaagatctggcgcattgaaa
cattttgtcattccaaaaatcaaacgtgataaagatggcaacattactcaggagtcaagg
aaaactgaatttagaggtgaacacaaggacaaagtagagaagattgggctagttgaagat
ctaaataaaggagctaagcctatagttgtccttcaaaaactttcactggatgatgtgcag
aaatttattaaggatagagaagataaatcaaggggctcttgttttaaacctaacaagaac
aagtcaaccaaacctaataaaggtagcatagatcagtcagtgttaaaggagttgcctcct
gagctcctggcagaaattgaatccaccatgccactttgtgaacgtgtgaaaatgaacaag
cgcaaacgtagcacagttaatgagaaaccaaaatatgctgaaatcagttctgatgaagat
aatgacagtgaagaagcttttgaatcttctcgtaagagacacaaaaaggatagagatgaa
gcttgggagtatgaagagcatgacaggagaagttctggtgaccataggagaagtggtcat
taccatgaaggaaggaggatttctggtagtggccgttaccgtaatcgcagtcctgatgac
tctgatatggatgattattctcctcctcctagcctcagcgaggtggctagaaaaatgaag
aagaaagaaaaacaaaagaagaggaaagcttatgaacctaaactaacacctgaagaaatg
atggattcttcaaccttcaaaaggtttactgcttcaatagagaatattttggaaaatctg
gaagacatggattttacagcttttggtgatgatgatgagattccacaggaattgctactg
ggcaaacatcagcttagtgagttgggtagtgaatctgcgaaaatcaaggcaatgggcatt
atggacaagctctcaacagataaaacagtaaaagttctgaatattttggagaagaatatt
caagatggatccaagctttctactttacttaaccacaataatgacactgaagatgaggag
agattatggagagatcttataatggagagagtgacaaaatctgctgatgcttgtcttact
gctatcaatattatgacatcaccaaatatgcctaaagctgtatatattgaggacgtaata
gaaagagttattcagtacacaaaatttcatttgcagaacactctctatcctcagtatgat
cctgtgtatagagtggatcctcatggtggtggtgttttaagttcaaaagcaaaacgtgcc
aagtgttccacccacaagcaaagagttatagtgatgttgtataacaaagtttgtgacatt
gtcagcagcttgtcagagttgctggagatacagcttctcactgatacaactattcttcag
gtgtcatcgatgggaataacacctttctttgtagaaaatgtcagtgagctacagttatgt
gccatcaaattagtgactgcagtgttctcccggtatgaaaaacacagacagctaatatta
gaagaaattttcacttcccttgcacgactaccaactagcaagaggagtttgagaaacttc
aggttaaacagcagtgacactgatggagaacctatgtacattcagatggtaacagcacta
gttctgcaacttattcagtgtgtggtgcacttaccatcagcagaaaaggattccaattca
gaggaggaatcaaacaagaaagtggatcaagatgtgcttattacgaactcatatgaaaca
gccatgaggacagcacaaaatttcctttctatttttcttaagaagtgtggcagtaaacaa
ggggaggaagattacaggccactgtttgagaactttattcaagatcttctttctacagtc
aataaaccagaatggccagctgcagagttgctacttagtttactaggaaggctattggtt
caccagttcagtaacaaatccacagaaatggcattaagagttgcatctcttgactatctt
ggaactgtagcagcaagactgaggaaagatgcagtcactagcaaaatggatcaaggatct
ttagccagaatcctcaaacaggtttcaggaggagatgatgaaattcaacaactgcaaaag
gctttactagattatctggatgagaacacagaaattgatgcatcattagtgttttctcgg
aagttttatgtagctcagtggttccgtgatacaactatggagacagaaaaagcaattaaa
tctcagaaggatgaggattcatctgaaggaactcatcatgcaaaagatgttgagaccaca
ggacaaatcatgcatagagcagaaagtcgcaaaaagtttcttcgcagcatcattaaaact
actccatctcagttcagcacattaaagatgaattctgatactgtggactatgaagatgca
tgtttgattgttcgctacttggcctctatgaggccgtttgcccagagcttcgatatttat
ttgacacagattctgcgtgtacttggtgaaaatgcaattgctgttcgaacaaaagccatg
aagtgtttgtctgaggttgttgctgtagaccccagcattctagccaggctggatatgcaa
cgaggagttcatgggcggctaatggataactccactagtgtacgagaagcagctgtggag
ctgcttggccgatttgtgctctgtcgtcctcagcttgctgagcagtattatgacatgctg
attgaaagaatactggatactggtatcagtgtcagaaaaagagtcataaaaatacttagg
gatatttgcattgagcaaccaacttttcccaaaattacagaaatgtgtgtgaaaatgatt
cggagagtcaacgatgaagaaggcattaagaaattagtaaatgagacattccagaagctc
tggtttactccaactccacaccatgacaaagaagcgatgacaaggaaaatactaaacatc
actgatgtggttgcagcttgtagagatacagggtatgattggtttgagcagcttcttcaa
aatctgttgaagtcagaagaggatgcctcatataaacctgtgaagaaagcctgtactcaa
cttgttgacaatttggtcgagcacattcttaaatatgaagaatctttatcagattctgac
aataaaggtgtgaattctggtcgcttggttgcttgcataaccactttgttcttgttcagc
aaaataaggccccagctaatggtcaaacatgccatgaccatgcagccatacctgaccact
aaatgtagtacccagaatgatttcatggtgatctgcaatgttgcaaaaatcttggagctt
gtagtgccactaatggagcacccaagtgagacctttcttgccactattgaggaggacctc
atgaaactcatcatcaaatacggcatgacagttgttcagcactgtgtgagctgccttggg
gctgttgtgaacaaggtcacccagaactataaatttgtgtgggcctgttttaatagatac
tatggtgcactttcaaaactaaaaaatcaacaccaagaagaccccaacagtacaatactt
actgccaataaaccagcactccttagatcacttttcactgttggagcactgtgtcggcat
tttgattttgatcaggaagattttaagggcaacagtaaggttaacattaaggataaagtc
cttgaactgctgatgtattttacaaagcattcagatgaagaagtacagacaaaggccatt
attggtcttggatttgcatttatacagcacccaagtttaatgtttgaacaagaagtgaag
actctgtacaacagcattctttcagataagaactgttctgtaaacttaaaaatccaggtg
ttaaaaaacctccagacctacttgcaggaggaagatacacgtatgcagcaggcagacaga
gactggaaaaaagtagcaaaacaggaagacctgaaagaaatgggtgatatttcctcaggg
atgagtagttccatcatgcagctgtatctcaaacaggtccttgaggctttctttcataac
cagtccagtgtacgccactttgctctaaatgtcattgcactgacattaaaccaaggtctc
atccatcctgttcagtgtgtgccatacttaattgctatgggcacagatccagagccctct
atgcgaaataaagctgaccaacagttggtggaaatagacaaaaaatatgctgggttcatt
cacatgaaagcagtggctggtatgaagatgtcttaccaagtacagcaggcaattaatacc
tgcccaaaagatcctgtgagaggttttagacacgatgaatcatccagtgcactgtgttca
cacctctactccatgattcgagggaaccgtcaacacagacgagcctttctaatttcttta
ctcaacctctttgacgatactgcaaaaacagaggtgaatatgcttttgtacatagcagac
aatctagcctgttttccttaccaaacacaggaagagccactgtttataatgcatcatata
gacattacactatcagtttctggtagcaacctactacagtcatttaaagagtctatggtg
aaagacaaaaaaaaggagagaaagcctttatcggaggaggagtccgagagtgacagtaac
agtggcagtgggagtgaaagtgaggcagaagcttctaagcctcggaggttacggaaacga
gtggactctgattcagattctgatgaagaaaatgatataaatgcagtgatgaagtgttta
cctgaaaattcagctcctttaattgaatttgcgaatgtctcccaaggcatattactactt
ctgatgctgaaacagcatctaaagaacctctgtggattctctgatagtaaaattcaaaaa
tattctccatctgaatctgcaaaagtgtatgataaagctataaacaggaagacaggagta
catttccatccaaaacaaactctggattttctgcggagtgatatggctaattctaagatt
actgaagaagtgaagaggagtatagtaaaacagtacttagatttcaagctccttatggaa
catttggatcctgatgaagaggaagaagatggagaggtgtcagctagcacaaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaacaatgcagctgagaca
gaggacgatgaaagtgatggggaggatagaggaggaggcacttcaggggtgaggcggagg
aggagtcaacgtatttcgcagcgtattacgtaa
DBGET
integrated database retrieval system
