Geospiza fortis (medium ground-finch): 102035381
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Entry
102035381 CDS
T03755
Symbol
USP8
Name
(RefSeq) ubiquitin specific peptidase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04137
Mitophagy - animal
gfr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102035381 (USP8)
04137 Mitophagy - animal
102035381 (USP8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102035381 (USP8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102035381 (USP8)
04121 Ubiquitin system [BR:
gfr04121
]
102035381 (USP8)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102035381 (USP8)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102035381 (USP8)
Membrane trafficking [BR:
gfr04131
]
Endosome - Lysosome transport
Others
Others
102035381 (USP8)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102035381 (USP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Metallothio_Pro
Motif
Other DBs
NCBI-GeneID:
102035381
NCBI-ProteinID:
XP_005419678
UniProt:
A0A6I9HEX0
LinkDB
All DBs
Position
Un
AA seq
1117 aa
AA seq
DB search
MPAVASVPKELYLSTSLKDLNKKTEVKPEKTSTKSYVQSALKIFKAAEESRLDGDEEKAY
ILYMKYVAVYNLIRKRPDFKQQQDYFHSILGPTNLKKALDEAEILSDSLKLRYEEAEVRK
KLEERDRQELQKKQEPKDDGKSSAKNSSESAVDSKGKSQRINGETKQSLERKDQSDGLSG
AVTPERLFAMMSDKNIELLIMDARKSKDYQESCIPKSISVPEEAIHPGDTAYLIEARLPE
ESRDSWKRRGQFHYVILLDWFSSAEDLKLGTTLQSLKDALFKWESKTILQNEPLILEGGY
ENWLLCFPQYTTNARVTPPQHGRTEAVTVSLDFTYPSLEEPAPVLPVVAENEEMGDNLEE
RLKSLNRPNIQDAAVPKSDSSFVVNPLSVTRSIPEVDRSKKPSLRILGDNRAKPASTISD
SQSGESGRIVPDRSTKPLHDGRNTLTEEEKSRVHAETAALLEKNRREKELRERQQQEQRE
RLKREKEEQERKEQEQKAKEEQKEKEHKEKLQQSKEDREQKERDEQIKREQEEKEQERAH
REAVEAKKQNKNEPENIGAKRIEIDKISMEEREKGTRTPETQKRALGDASQTFVTVPGKQ
MGVKGQPDSEAQKPGPLREDSEQDTERLKSQREPLIRARSEEMGRIVPGLPAGWVKFLDD
ITGTYRYYHSPTNTVQMYPPEMAPAATPPSTPPTRKAKAKVAVEREREHSKLKRSYSSPD
ITQAIQEEDKKRIPVTPAVNRDNKPACYTKAEISRLSASQIRNLNPVFGGSGPALTGLRN
LGNTCYMNSILQCLCNAPHLAEYFNRNLYQADINRSNFLGHKGEVAEEFGVIMKALWAGQ
YKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHL
DDSSAAEIAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKRSRTFEAFMYLSLPLASSSK
CTLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWK
QKLQTSVDFPLETLDLSQYVIGPKTSLKRYNLFSVSNHYGGLDGGHYTAYCKNASKQRWF
KFDDHEVSEISASSVKSSAAYILFYTSYEQRAVDMAT
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtggcatctgtacctaaggagctctacctctctacttcattgaaagatctc
aacaagaagacagaagtaaaacctgaaaagaccagtacaaaaagttatgtgcagagtgcc
cttaagattttcaaggcagcagaggaaagcagactggatggagatgaagaaaaagcttac
atcctatacatgaaatatgtggctgtttataaccttattagaaagagacctgattttaag
cagcagcaggattattttcattcaattctgggacctacaaatttaaaaaaagctcttgat
gaagctgaaatactgtcagacagccttaaactcagatacgaggaggctgaagttcggaaa
aaacttgaagagagggacagacaagagctgcagaaaaagcaagaaccaaaagatgatgga
aagagctcagccaaaaactcctcagaaagtgctgtagattccaaaggaaaaagccaaagg
attaatggtgagacaaagcaatcactggaaagaaaagatcagtctgatggcctgagtgga
gcagtcacacctgagaggctgtttgcgatgatgtcagacaaaaatattgaattgcttata
atggatgctcgaaaatcaaaggattatcaggaatcctgtattccaaaatccatcagtgtc
ccagaagaagctatccatcctggagatactgcttacctgattgaagctagactcccagaa
gagtctagggattcatggaagaggagaggacagttccattatgttatactgctagactgg
tttagttctgctgaagacttaaagctgggaacaactctacagagcctgaaagatgcactt
tttaagtgggaaagcaaaaccatcctgcagaatgaacctttaattctagagggaggttat
gaaaactggctcctttgttttccccagtatacaacaaatgctagagtaactccaccccag
catggcaggactgaagcagtgactgtttctttggattttacatatccatctctggaagag
ccagctcctgtgctacctgttgttgctgaaaatgaagaaatgggagataatttggaagag
agactaaaatcacttaaccgaccaaacatacaagatgctgctgttccaaaatctgacagt
tcctttgtagttaatcccttgtcagttacaagaagtatccctgaggtggaccgttctaaa
aagccttcactaagaatccttggtgataacagagcaaaacctgcaagtacaatcagtgac
agccagtctggtgagagtggaagaatagttccagaccgctccacaaagcccttgcatgat
ggaaggaacactctgacagaagaagaaaaaagtcgggtccatgcagaaactgctgctttg
ttagagaaaaacagacgggaaaaggaactgcgggagaggcaacagcaggaacagagagag
aggctcaagagagaaaaagaagaacaagaaagaaaagaacaagaacaaaaggcaaaagaa
gaacagaaggaaaaggaacacaaagaaaagctacagcaatcaaaagaggacagagagcag
aaggagagggatgaacaaataaaaagagaacaggaggaaaaggaacaagaaagagcacac
agagaagcagtagaagcaaaaaagcaaaataaaaatgaaccagaaaacattggagcaaaa
aggattgagattgacaaaatatcaatggaagaaagagaaaagggaactcgaacaccagaa
acacagaaacgggcactgggtgatgcatctcagacctttgtgactgttccaggcaagcaa
atgggggttaaaggacaaccagacagtgaagctcaaaagccaggaccccttagagaggat
tctgaacaagatactgaaagacttaaatcccagcgggagccattaataagagcacgaagt
gaggagatgggaaggatagtcccagggctgcctgcaggttgggtaaagttcctggatgac
atcactggaacctatcgttactatcactcaccaaccaacactgttcagatgtacccacca
gaaatggctcctgcagccactcctccatcaacccctcccacccggaaagccaaggcaaag
gtggcagttgagcgggagagggaacactccaagctcaagcgctcctactcgtccccagat
atcacccaagccattcaggaagaagacaagaaaagaattcctgtcactcctgcagtcaat
cgtgacaataaacctgcctgttacactaaagcagaaatttccaggctctctgcatcgcag
attcgcaatctcaatcctgtgtttgggggctcgggaccagctctgacaggacttcgtaat
ctagggaacacttgctacatgaattccatattacagtgtctgtgcaatgcacctcacctg
gctgagtatttcaacagaaacttgtatcaagctgatattaacaggtcaaatttcctgggg
cataaaggtgaagtggctgaagagtttggtgtaataatgaaagctttatgggcaggacag
tataaatatatcagtccaaaagacttcaaaattacaattgggaagattaatgaccaattt
gcaggatatagccaacaggactcccaagaattgcttctctttctaatggatggcttgcat
gaggacctaaataaagctgacaacaggaaaagatacaaggaagaaaataatgatcacctg
gatgactcaagtgcagcagaaatagcctggcacaaacacaaacagctcaacgagtccatc
attgtggcactgttccaagggcagttcaaatccaccgtgcagtgtctgacgtgtcacaag
aggtcccgaaccttcgaggctttcatgtatctctcattaccacttgcatcctccagcaaa
tgcactctgcaggaatgccttagattgttctccaaagaagaaaagctcactgataacaat
agattttactgtagccattgcaaaactcgaagggattctttgaaaaaaatagaaatttgg
aaattaccacctgttcttcttgtgcacttgaaacgattttcctatgatggaagatggaaa
caaaagcttcaaacttcagtagattttccactggaaactcttgacctctctcagtatgtt
attggtccaaagacttccttgaagagatacaatctgttctcagtatcgaatcattacggt
gggctggacggggggcactacacagcctactgcaaaaatgcttcaaaacaacgctggttt
aagtttgatgaccacgaagtgtctgagatctcggcgtcctcggtgaagtcctcagctgct
tacattctcttctatacttcctatgaacagcgagcagtagacatggccacgtaa
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integrated database retrieval system
