Geospiza fortis (medium ground-finch): 102035613
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Entry
102035613 CDS
T03755
Symbol
GEMIN5
Name
(RefSeq) gem nuclear organelle associated protein 5
KO
K13133
gem associated protein 5
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102035613 (GEMIN5)
03041 Spliceosome [BR:
gfr03041
]
102035613 (GEMIN5)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102035613 (GEMIN5)
mRNA cycle factors
P-body specific factors
102035613 (GEMIN5)
Spliceosome [BR:
gfr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
102035613 (GEMIN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
MIOS_WD40
Nup160
Motif
Other DBs
NCBI-GeneID:
102035613
NCBI-ProteinID:
XP_014167637
LinkDB
All DBs
Position
Un
AA seq
1483 aa
AA seq
DB search
RSLTVATGELIGHTDRISGFAFCHCPGHGGLCASSSDDGSVRIWDSGTLSPVLEYSLHQN
AISALHWSPLVKDLIVTGDEKGVIVCYWHNRNDSQQFFPEPRTVFCLTCSPHHENLVAIG
YKDGMVVIIDISREREVVHRLRGHEDEIHGLAWCPVPGEERLPAWQDELQAAPSEEGKVP
NGEVTQDTATRKGCYLASGSKDQTIRIWSCTRGRSVMTLKLPPTKRRGGAVDPAVKERIW
LTVHWPAGHPSDILSSAFGGELLLWNLTQPGKRKWTLLGSSEGQNHSRIVFNLSSVKHQD
RELLFSISMDRDVKCWDLSTLDCSWTMPSLGGFVYSLAFSPVDTGCLAIGVGDSMIRVWN
TLSINNIYDVKTFWQSIKSKVTALSWHPTKEGSLAFGTDDGKVGIFDTLSSSAKNKPPQI
SSTYHKKTVYTLAWGPPTPPLISGEESEQLSVTLYSCAGEGIVFQHNPWKLNGEANDINK
VIRDTNSIKHKLPARTEVSWKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINAI
RWHHEHGTQPELSYLIASGSINATIYVHNLKSVVENSSENPLTITEPFRTLAGHTAKITS
LSWSPHHEGRLVSACYDGTAEVWDVMKEEPLCNYRGHQGRLLSVQWSPVEPDCVYTGADD
FSVHKWHISKQEHTRPPQGKKSIELEKKRSIQPKVKAKKKKKPVGKSPGKQDANDAMNGD
ESMKEMLLEENGVSDHEGEKEAQEAELADKVSVTVSRDTSSSACDYSSFSLPKPSVTQKA
APVKKDPPKEKPTPDASLKKRKPRSILPFSTLMDHRSKEELHQDCLRLAACLKTKDNEDM
SSDLKDCIHLGLFTDRDSLHKMIDMEGKHHLENGHAELFQQLMLWKGDMKGVLQAAAERG
QLTDQLVAMAPMVGYQAWVWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAIELLKVNNF
YREAIVMAKARLRPEDPVLKELYTSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLSKKG
DVASLKTAAELALISGEEELSATLSLRCAQDLLLSRNWVGAQEVLQQHKTLFGQRLVFCL
NELLCSCLSERNPCERKSPVPPCYHSWELNREAPFLDMVTQVWQNVLGMDTTEKATCAQE
QLGRIEHPPSTSNTHPKQVLFHISHDLALAALSCHLGMWDEAVKSILGAVTRSFDAGNFT
LMQEICSIILPEGCDDLRDKLDSTNSQSMDACRSLEGFVAYRQLYNLWWNSPKVSLGLQK
AVLGPSVQTALEKSCVSGDPAPEETVQTTAEMDENLCSTTEVSKCETQSDSRTDSVDVAD
RQSTPKGCQVLLSEEMAALQNTQRDIAEVQETLAEMIRQHQQQRNNVQENTNGDSQGSNL
DQSSETESDKPCSDSNQMNCKEEAKQPVTLPELTKQLLKAKQKLAEFPDNLKVFPFPDVL
ECCLVLLHLGSQCPPELQEEALALLRKHGGAGVYKKAGRRFLT
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
cggtcgctcactgtcgcgacaggggagctgatcggacacacggacaggatctccgggttc
gccttctgccactgccccgggcacggcgggctctgcgccagcagctcggacgatggaagc
gtcagaatctgggacagcgggaccctgtcgccggtgctggagtacagcctgcaccagaat
gccatctcagcactgcactggtcccctcttgtgaaagatctgattgtgaccggtgatgag
aaaggtgtcattgtttgttactggcacaacagaaatgacagccagcagttcttcccagag
cccaggacagttttctgcctcacctgttctcctcatcatgaaaacctggtggccattggc
tacaaggatggcatggtggtgataattgatatcagcagggagagagaagtcgtgcaccgg
ctgagaggccacgaggatgaaatccatggtctggcctggtgccctgtgcctggggaggag
aggttacctgcttggcaggatgagctccaggcagctccttcagaagagggcaaggttcca
aatggggaggtgacacaggacacagccacaaggaaaggttgttacctggcctctggaagc
aaggatcaaaccattcgaatatggagctgtaccagaggcaggagtgtgatgactctgaag
ctgccacccaccaagaggagaggaggggccgtggacccggcggtcaaggagcgcatctgg
ctgacggtgcactggcctgctggccacccctcagacatcctgtccagtgcctttggagga
gaactgcttctttggaatttgacccagcctggcaaacgcaaatggactcttctgggatcc
tcagaaggacaaaaccattcccgaattgtgttcaatctcagctctgtgaagcaccaagac
agagagctccttttttccatttcaatggacagagatgtgaaatgctgggatctgtccact
ctggattgcagctggaccatgccctcccttggggggtttgtctacagccttgccttctcc
cccgtggacacaggctgcctcgccatcggggtcggggacagcatgatccgagtctggaat
actctgtccatcaacaacatctatgatgttaaaaccttctggcaaagcataaagtccaag
gttacagcattatcctggcatccaactaaggaaggctccttggcttttggaacagatgat
ggaaaagttggcatatttgacaccttgtccagcagtgctaagaacaaaccacctcagatc
tccagcacttaccacaagaagacagtgtacacattagcctggggtcctcccactcctcct
ctgatttctggagaagaaagtgaacagctctctgtaactttatatagttgtgctggagaa
ggaattgtttttcaacacaatccctggaagcttaatggagaagcaaatgacatcaacaaa
gtcatcagagacaccaattcaatcaaacacaagctgcctgcacgcacagaggtcagctgg
aaaccagatggcaaactgctggctcttggcaatgaggatggctcaattgaaatatttcag
gcaccaaacctgaagttgctctgcactatccagcagcatcacaaactgatcaatgccatt
cgttggcaccacgagcacgggacccagccagagctgagttatttgatagcttcaggctcc
atcaatgccaccatttatgtacataatctgaagagtgttgtagagaactcttcagaaaat
cctttgacaataacggagccttttcgaactctggctgggcacacagctaaaatcacaagt
ctttcttggagtccccaccacgagggaagattggtgtctgcttgctatgatggcactgca
gaggtgtgggatgtgatgaaggaggagccactctgcaactaccgagggcaccagggccgc
ctgctgagtgtgcagtggtcaccagtggagccagactgtgtttatacaggagcagatgat
ttctctgttcacaaatggcacatctccaagcaggagcacacacggcctcctcagggcaaa
aagagtatagaattagagaagaaaagaagtatacagccaaaagtcaaagccaagaagaag
aaaaagcctgtaggcaagagtccaggcaagcaggatgcaaatgatgccatgaatggagat
gagagcatgaaggaaatgctgctggaggaaaatggagtgtcagaccatgaaggagaaaaa
gaagctcaggaggcagagttggctgataaagtctctgtgactgtgtccagggatacatct
tcatctgcatgtgattattcttcattcagcttgccaaagccttctgtgacccagaaagct
gctcctgtgaaaaaggatccacctaaagagaaaccaactcctgatgcctctctgaagaag
aggaaacctcgttctattctgcccttcagcacattaatggatcacagatcaaaagaagaa
ttgcatcaggactgcttgaggctggctgcatgcctgaaaactaaagataatgaagatatg
tcctctgacctcaaggattgcatccacctggggctgttcacagacagggattctctgcac
aagatgattgatatggaaggaaagcaccacttggagaatgggcacgcagagctcttccag
cagctcatgctgtggaaaggagacatgaagggtgtcctccaggcagctgctgagaggggg
cagctcacagaccagctggtagccatggcacccatggttggataccaggcctgggtttgg
acagtggaagcctttgccaagcagctgtgttttcaggagcaatatgtgaaggctgcctcc
catctcctgtccatccataaagtctatgaggctattgagctcctgaaagtaaacaatttt
tacagagaagcaattgtaatggccaaggccaggctgagaccagaagatccagttctgaag
gagctctacaccagctgggcagctctgctggagaaagatggccattattccatggctgcc
aaatgttatttgggagcttcctcaccctatgatgcagttaaagtgttgtcaaaaaagggg
gatgtggcatctcttaaaactgctgctgagcttgctctgatatctggggaggaggagttg
tcagcaactttgtctttgagatgtgcccaagacctgctgttatccaggaattgggtggga
gctcaagaagtccttcagcagcataaaactttatttggacagagactggttttctgcctg
aacgagctgctctgcagctgcctcagtgagaggaatccctgtgagcgaaagagccccgtg
cccccctgttaccacagctgggagctgaacagagaggccccatttttggacatggtgaca
caagtgtggcagaatgtgctgggcatggacaccactgaaaaagccacctgtgcacaggag
cagcttggcaggattgagcatcctccttcaaccagcaacacacacccaaagcaggtgctt
ttccatatctcccatgacctggcccttgcagccctgagctgtcacttgggtatgtgggat
gaggcagtgaaaagtattcttggggctgtgacccgcagttttgatgctgggaatttcact
ctgatgcaggagatttgcagtatcatccttcctgagggctgtgatgacctgagagacaaa
ctggacagcacaaactctcagagcatggatgcctgcaggagtctggagggctttgtggct
tacagacagctctataacctgtggtggaactcacccaaagtctcccttggcctgcagaag
gctgtgttgggtcccagtgtgcagacagctcttgagaagagctgtgtttcaggtgaccca
gcccctgaggaaacggttcagactacagctgagatggatgaaaacctctgcagtacaact
gaagtttccaagtgtgagacacagagtgactcaagaactgattcagttgatgtggcagac
agacagtcaacaccgaagggttgccaagtgctcctttcagaagagatggctgccttgcag
aacacccagagggacatagctgaggtccaggagactttagcagagatgatccgccagcat
cagcagcagaggaacaatgtccaggaaaacacaaatggagacagccagggaagcaacctg
gaccagagttcagagactgaatcagacaaaccatgctctgacagcaaccagatgaattgc
aaagaagaagcaaagcaaccagttacactccctgagctcacaaagcagcttctgaaagca
aagcagaaattagctgaattcccagacaatttaaaggtcttcccattccctgacgtgctg
gagtgctgcctggtgctccttcacctgggatcccagtgtcctcctgagctgcaggaagag
gctctggctctcctgaggaaacacggtggtgctggtgtttacaaaaaggctggcaggaga
ttcttgacatga
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integrated database retrieval system
