Geospiza fortis (medium ground-finch): 102035774
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Entry
102035774 CDS
T03755
Symbol
SYNPO2L
Name
(RefSeq) synaptopodin 2 like
Organism
gfr
Geospiza fortis (medium ground-finch)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calsarcin
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
102035774
NCBI-ProteinID:
XP_005417286
UniProt:
A0A6I9HCD8
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Position
Un
AA seq
1084 aa
AA seq
DB search
MGAEEEMLITLSGGAPWGFRLQGGSEQKRPLQVSKIRKRSKACRGGLWENDVLVSINGKS
CAGLSHANAMQIIDSSDGMLNIRVKRIVGGDQTGPWLQRSPSPGQRVLSPPSVPSPSARL
LSSEAAGAPATTQPSQPWRSQRNLESLTSPPDSEAYYGETDSDADNVAQEKQRRARRKSP
RSPPDSTTGRADAPQDEVSLSEQSGYESMPEAAAQGGAEPASSSGVAKREIVCLPGSRTD
TPFSDSEGQLRTPSAEGREPSPEAMLLPHSTKAIRAERHLIPMVGPVEHPIDEDLTTTYT
EKAKQAKLHRHESIQEKNVKEAKTKCRTIASLLTDAPNPHSKGVLMFKKRRQRAKKYTLV
SFGSVDEDRSYEEEDGVFPTSESEFDEEGFSDARSLTNHSDWDNTYLDIEKSKSDSEQKE
EKQKGLSEASGKGARLFEQQRERAGKYTVEKAPVQKSPELVPAAQPKQGTVNGDMPVPEK
ADNVPLSIHLEAVQVPSKQPATVPTQLLTAPSPTFFPPPPSTPDPFSAGSTSMFNRSARP
FTPGFSGQRPATSSVIFRPPAPKKPTESLGGQSTVVPPFSPLVPGTPANAPVPTQRGAVS
SSTSLYIPAPGRPTSPLESQPKGGGSASEVKPSANTARTSTTSIFLSAPSEPGGDVASTA
SQPRVPGTASSSLYISPAPSQHMRSSSPVPKQPSPAITPAMPRPPSEPLTSREQRIAVPA
PRTGILQEARRRGNKKPMFSKIEEKKKNSPNPELLSLVQNLDEKPKGDHPAAGFESGPEE
DFLSLGAEACNFMQSSGRKFKTPPPVAPKPQQDAGLVNGAQDMPQLKGKGAELFAKRQSR
MDKYVVETTPKPEYKPRTPSPSPSLPSCWKYSPNIRAPPPIAYNPMHSPFYPLAASKSQA
SKAESKVKKAPGQKSGIKVIDLMRHQPYQLKSAMFCFGDPPSPSTQTTPGQPTSQASSSF
VAAKQVPVKIAKTQEIRRFSTPAPMPASSSLAPTVLMPRSATTLDEPLWRTEMASSAPAT
PAPFQVELSPSPKPYQSSPEPGQVGQGPPPNSASASRFQVARPKFSAARTGMQANVWRPS
FGHH
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgaagaagaaatgctcatcactctgtctggaggtgccccctggggcttccgc
ctgcaagggggttcagagcagaaaagaccccttcaagtgtcaaagattcgaaagagaagc
aaagcatgccgtggaggcctgtgggaaaatgatgttctagtatctatcaatgggaagtca
tgtgctggcctgtcccatgctaatgccatgcagatcatcgattcctccgatggcatgctc
aacatccgtgtgaaaaggatagttggtggggaccagactggcccgtggctccagcgctcc
ccttctccggggcagcgagtgctctctccaccatccgtgcccagcccctcagcacggtta
ctcagctctgaagcagcaggagccccagccaccactcagccctcgcagccatggaggtca
cagaggaacctggagagcctcacgtccccaccggacagcgaggcctactatggcgagaca
gacagcgacgctgacaacgtggcgcaggagaagcagcgccgcgctcgcaggaagagcccg
cgctccccgccggacagcaccacgggcagggcggacgcgcctcaggacgaggtgtccctg
tctgagcagagcggctacgagagcatgcccgaggctgcggcgcaggggggagcagagccg
gccagctccagcggggtggccaagagggagattgtctgcctgcctggtagtcgcacggac
acgccgttctcagacagcgagggacagctgcgtacaccgtcagcagaggggcgggagcct
tctccagaggcgatgctcctgccccactccaccaaggcgatccgagcggaacgccacctc
atccccatggtggggccggtggaacacccgattgatgaagacctaaccaccacttataca
gagaaagccaagcaggccaagctccaccgccacgaaagcatccaggagaagaatgttaag
gaagccaaaaccaagtgcagaaccattgcatccctgctgacagatgcacccaacccccac
tccaagggggtgctgatgtttaagaagcgcaggcagagggctaagaagtatacattggta
agctttggcagtgttgatgaagaccgctcctatgaggaggaagacggagtttttccaacc
agtgaatctgaatttgatgaggaaggtttctctgatgcccgaagcctaactaatcactca
gactgggacaacacttacctagacattgaaaagtccaaatctgactctgaacagaaggaa
gagaagcaaaaaggtttgagtgaggcctcaggtaaaggagcacgattatttgagcagcag
agggaacgggctgggaagtacacagttgagaaagctccagtgcagaagagcccagagctt
gtcccagctgcccagccaaagcagggcacagtgaacggagatatgcctgtgccagagaag
gcagacaacgtgcccctcagcatccacctggaagctgtgcaagtgcccagcaagcagcca
gccactgtccccactcagctcctgactgcccccagccccactttcttccctcctccccca
agcacccccgaccccttctctgcaggttcaacaagcatgttcaacaggtctgcacggccc
tttactcctggcttttctggccagcgtccagcaacatcctctgtcatctttaggccacca
gcacccaaaaaacccactgaaagtctgggtgggcaaagcacagtggttccccctttctca
cctctggttccaggaacacctgccaatgcaccagtgccaacacagcgtggtgcagtcagc
tcctccacatctctgtatattcctgcaccaggaagaccaacatcaccactggagtcacag
ccaaaagggggaggaagcgcttcagaggtcaagccttctgccaacactgcgcggacatcc
accacctctatctttctgtcagctccctcagagccaggaggggatgtggcctccacagca
tcccagccacgagtccctggaacagcctcttcttcattgtatattagtccagcaccatca
cagcacatgagaagcagttcccctgtgccaaagcagccttctcctgccatcactccagca
atgccacggcctccttcagagcccttaacctccagggagcagaggattgctgtgccagct
ccccgcacaggcatcctgcaggaggctcgccgacggggcaacaagaaacccatgttcagt
aagattgaggagaagaagaagaattcacccaaccctgagctcctgtctctggtgcagaac
ctggatgagaagccaaagggtgaccaccctgcagcaggctttgagtctgggcctgaggag
gacttcctcagcctgggtgctgaggcctgcaacttcatgcagtcctcaggccgcaagttc
aagaccccacctccggtggcccccaagcctcagcaagatgctggattggtcaatggggcc
caggacatgcctcagcttaaaggcaagggggcagagctctttgccaaacgccagagccgc
atggacaaatatgtggtggaaacaacaccgaagccagagtacaagcccaggaccccctct
ccatccccttctctaccctcatgctggaaatattcacccaacatccgggctccccctcca
atagcttacaacccaatgcattcccctttctatcctctggcagccagcaaatctcaggct
agcaaagcagagagcaaagtgaaaaaggcacccggccagaaatcagggatcaaggtcatt
gatttaatgcgccaccagccctatcaattgaagtcagccatgttctgttttggggatccc
ccaagccccagcactcagactactcctggtcagccaacctcacaggctagctcatccttt
gtggcagccaagcaggtccctgtgaaaatagccaagacccaagagattcgtcgcttctcc
actccggctcccatgccagcctccagcagcctggcacccactgtgctcatgccccgctca
gccaccacgctggatgagccattgtggagaacagaaatggcctcttctgcccctgctaca
ccagcacccttccaggtggagctcagcccctcccctaagccatatcagagctccccagag
cctggacaggtgggacagggacctcctccaaactcagcctctgcctctcggtttcaggtg
gccaggcccaaattctctgcagcaagaacaggcatgcaggccaatgtgtggaggccaagt
tttggccatcactga
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integrated database retrieval system