Geospiza fortis (medium ground-finch): 102036441
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Entry
102036441 CDS
T03755
Symbol
LRRTM1
Name
(RefSeq) leucine rich repeat transmembrane neuronal 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
102036441 (LRRTM1)
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRRNT
LRR_12
UL97
HemY_N
Motif
Other DBs
NCBI-GeneID:
102036441
NCBI-ProteinID:
XP_005427802
UniProt:
A0A6I9HS67
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Position
Un
AA seq
520 aa
AA seq
DB search
MDFLLIGLCLNWLLRKPPGLILCTLGIFSKMLPAVNSGCPQLCRCEGRLLYCESLNLTEM
PRNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTL
SSNKITQLPNTTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCL
RRNKVTIVVNTLDWIWQLEKMDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDSRVL
DSWKSLTSISLSANAWDCSRNVCALASWLSNFQGRYDSNLLCATPEYAQGEDVLDAVYAF
HLCEDADPTSVNTFSPVTNNSEQTLGYGSATATYDAPDGDEDRTTYAVTITMPGENSENA
VQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPAGLRQLRQCFVTQRRKQKQKQTMHQMAA
MSAQEYYVDYKPNHIEGALVIINEYGSCSCHQQPARECEV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttcttattggtctctgtttaaactggctgctgaggaagcccccggggttg
atattgtgtacgctgggtatcttttctaaaatgcttccagctgtgaatagtgggtgtcca
cagctctgtcggtgtgagggcaggcttttgtactgtgaatcactgaatctcacagagatg
cctcgcaacctgtcgggcatgatgggcttgtctctgcggtacaacagcctttcagagctg
catgatggacagttcacagggttaatgcagctcacgtggctctatctggatcacaatcac
atttgctcagtggaggggaatgcctttcaaaaattgcggcgagttaaagagctcaccctg
agttccaacaaaataacccaactgcccaacaccactttccgccccatgccaaacttgcgc
agtgtggatttatcatacaacaacctgcagtctttggagcctgacctgttccacgggctg
agaaaactgacaactttgcacatgcggtcgaacgccatcaagttcgtgccggtgagaatt
tttcaggactgtcgcagcctgaagtttctagacataggatacaatcagttaaagagcctg
gctcgaaactcttttgctggcttgttcaaactcactgagctgcacctcgagcacaatgac
ttggtgaaagtgaatttagcccattttcccaggctcatctccctgcactccctctgcttg
cgaaggaataaagttaccatcgtagtaaacactttggactggatatggcaactcgaaaag
atggatctctctggcaatgaaatcgaatacatcgaacctcatgttttcgaaagtgtacct
catctcaaatccctgcagctggactccaaccggctgacctacatcgactcccgagtcctc
gactcctggaagtccctcacgagcatcagcctctccgccaacgcctgggattgcagccgg
aacgtctgcgccctggcctcctggctcagcaacttccagggtcgctacgacagcaacctg
ctctgtgccacccccgagtacgcccagggagaggatgttttggacgccgtgtacgccttc
cacttgtgtgaggacgccgaccccacgagcgtcaacaccttctccccggtgaccaacaac
agtgagcagacgctgggctatggctcggccaccgccacctacgacgcgcccgacggcgac
gaggaccggaccacgtacgccgtcaccatcaccatgcccggcgagaactccgagaacgct
gtgcagattcacaaggtggtgacgggcaccatggcactgattttttccttcctcatcgtg
gttttggtgttgtatgtctcctggaagtgcttcccggccggcttaaggcaactaagacag
tgctttgtcacacagcgcaggaagcagaagcagaaacagaccatgcaccaaatggctgcc
atgtcagcccaggagtattatgttgattacaaacccaaccacattgagggagccctggtg
atcattaatgagtacggatcttgctcctgtcaccagcagccagcgagggaatgcgaggtg
tga
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