Geospiza fortis (medium ground-finch): 102037071
Help
Entry
102037071 CDS
T03755
Symbol
SMYD1
Name
(RefSeq) SET and MYND domain containing 1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00310
Lysine degradation
gfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102037071 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102037071 (SMYD1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
102037071 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
102037071 (SMYD1)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102037071 (SMYD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
pulA_all-beta
Motif
Other DBs
NCBI-GeneID:
102037071
NCBI-ProteinID:
XP_005428388
UniProt:
A0A6I9HSZ5
LinkDB
All DBs
Position
Un
AA seq
491 aa
AA seq
DB search
MTKGGMESVELFTTEGKGRGLKAQKEFLPGDVIFAEPAYAAVVFDSLTHVICHTCFKRQE
RLHRCGQCKFAHYCDRTCQRAAWLNHKNECSAIKRHGKAPTENIRLAARILWKMEREGTG
LSEGCLVAIEELQNHVDSFGEEEKKELRADVESFLEFWPPHCQQFGMQLISRIFGVISCN
GFTLSDQRGLQAVGVGIFPNLCQANHDCWPNCTVIFNNGNHEAVRSMFHTQMRIELRALS
KISPGDELTVSYVDFLSLSEERRTQLKKQYYFDCTCEHCKKQLKDDLMLAVKAGESKPSA
DTVKEVIQLSKDTLEKINKARMEGHYHEVVKLCRDCLKKQEPVLGDTNIYLLRMLSIASE
VLSYLQMFEEAADYAKRMVDGYLKIYHPNNAQLGMAVMRAGVTHWHAGLIEAGHGLICKA
YAILLITHGPSHPITKDLEVMRVQTEMELRMFQQNEFMYYKMREAALKNQKIQVMPEPSN
ENAPSLFHKKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaggaggaatggagtcagtggaattgttcacaactgaaggcaaaggcaggggt
ttgaaagcccagaaggaattcttgcctggggatgtcatctttgcagagccagcctacgca
gccgtggtttttgacagcctgacacacgtcatctgtcacacctgcttcaagaggcaggag
aggctgcaccgctgtgggcagtgcaagtttgcccattactgcgacaggacctgccagaga
gcagcctggctcaaccacaaaaatgagtgctctgccatcaagaggcatggcaaggcaccc
accgaaaacatcaggctggctgcccgcatcctgtggaagatggagcgggagggcactggg
ctgtccgagggctgcctggtggccatcgaggagctgcagaaccacgtggacagctttggg
gaggaggagaagaaggagctgcgtgctgacgtggagagtttcctggagttctggccgccc
cactgccagcagttcgggatgcagctcatctcccgcatttttggggtgatcagctgcaac
ggctttaccctcagtgaccaaagaggactgcaggctgttggtgtgggaatcttccccaac
ctctgccaggccaaccatgactgctggcccaactgcactgtcatcttcaacaatggcaat
catgaggctgtaagatcaatgttccacacacagatgaggatcgagctgagggccctgagc
aagatttccccgggggatgagctgacagtttcctacgtggatttcctcagcctgagcgag
gagcggcggacgcagctgaagaagcaatattactttgactgcacctgtgagcactgcaag
aaacagctcaaggatgacctgatgctggcagtgaaggcaggggaaagcaagccctctgca
gacacagtgaaggaggtgatccagctctccaaggacacgctggagaagatcaacaaggcc
cgcatggagggacattaccacgaggttgtgaagctgtgccgtgactgcctgaagaaacag
gagcctgtgctgggggacaccaacatctacctgctgaggatgctcagcattgcctccgag
gtgctctcctacctgcagatgttcgaggaagcagctgactatgccaagaggatggtggat
ggctacctgaaaatttaccatcccaacaacgctcagctggggatggccgtgatgcgggca
ggagtgacacactggcacgctggcctcattgaagctggccatggcttgatctgcaaagcc
tatgccatcctcctgataacccatggaccttcccacccaattaccaaagacctggaggtc
atgcgtgtgcagacggagatggagctgcgcatgttccagcagaacgagttcatgtattac
aagatgagggaagctgccctcaagaaccagaagatccaagtcatgcctgagcccagcaat
gagaatgcaccaagcctcttccacaaaaaggaataa
DBGET
integrated database retrieval system
