Geospiza fortis (medium ground-finch): 102037257
Help
Entry
102037257 CDS
T03755
Symbol
DDX46
Name
(RefSeq) DEAD-box helicase 46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102037257 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102037257 (DDX46)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102037257 (DDX46)
Spliceosome [BR:
gfr03041
]
Complex A
U2 snRNP components
U2 related factors
102037257 (DDX46)
Complex B
102037257 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
102037257
NCBI-ProteinID:
XP_014167622
LinkDB
All DBs
Position
Un
AA seq
1034 aa
AA seq
DB search
MSHYRKRSASRGRSGSRSRSRSPSDKRKREDRRSRSRERDRRRDRSRSRDKRRSRSRDRK
RQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSKEKTDGV
DISKEKKKDKDDKEEEKDKDATTNNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGEL
KKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEVKEEVKKFNMR
SVKGGGGSEKKTGPTVTKVVTVVTTKKASAESEKKKGELMENDQDAMEYSSEEEEVDLQT
ALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLELEGITVKGK
GCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIAKTGSGKTIA
FLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGI
SEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR
IVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENK
FLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDF
KNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE
DQARYAGDIIKALELSGNPIPPDLEKLWADFKDQQKAEGKLIKKSSGFSGKGFKFDETEQ
ALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTSNAPTPSAGN
AEKLEIAKRLALRINAQKNLGAEAQVMVPFHFKDVMQQATNAILRGGTIQAPTVSAKTIA
EQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQR
ISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQ
NSYQPTNKGRYKVL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattaccggaagcgctctgcgtcccggggccgctccgggagccgctccaggagc
cgctccccgtcggacaagaggaaacgcgaggacaggcgctccaggagccgcgagcgggac
cgcaggcgggacaggtcgcgcagcagggacaagagaaggtcacgctcgagggacaggaag
cgtcaaagacgttcaaggagtagagaaagggaacggagccgagagaggagacggtcccgg
agccgagagaggaggcgctcacggagcaggagtagagggagacgctctcgatcctccagt
ccaagcaagaacaggaaaacagaaaacagatcaagatctaaagaaaagacagatggtgtg
gacatttccaaagaaaagaaaaaggacaaagatgacaaagaggaagagaaagacaaagat
gctaccacaaataattttgatcagaataaactagaggaagaaatgagaaaacgaaaagaa
agagtggagaaatggagggaagaacaacgcaagaaggcaatggaaaacataggagagcta
aaaaaagaaattgaagagatgaaacaggggaaaaaatggagtttagaagatgatgatgat
gatgaagaggaaactgcagaaggagaaaaagaaggcaatgaggttgaagatgaggagtta
gatcctttagatgcttatatggaagaagtaaaagaagaggtcaagaagttcaatatgaga
agtgtgaaaggtggaggtgggagtgaaaagaaaactggaccaactgttaccaaggtggta
actgtggtgacaaccaaaaaggcatctgctgagtcagaaaagaagaaaggggaactcatg
gagaatgaccaagatgcaatggagtattcctcagaagaggaggaagttgaccttcagact
gccctgactggctatcagaccaagcagagaaagctgctagaaccagtggatcatggaaag
atagaatatgaacctttcaggaaaaacttctatgttgaagttccagaactagctaaaatg
actcaagaagaggtcaatgtgtacaggctggagctggagggaattacagtcaagggaaaa
ggctgtcccaaaccaataaaaacctgggtacaatgtggtatttccatgaagattctcact
gccctcaaaaaacatggctatgaaaagcccactccaattcaaacccaggctatcccagca
attatgaacggacgggatttgattggcattgctaaaacaggaagtggaaaaacgattgca
tttctgttgcctatgttcagacacattatggatcagagagcattagaagaaggagaaggt
cccatagctgtcattatgacacctacacgtgagttggctttgcagataaccaaggagtgc
aagaaattctcaaagacacttgggcttcgagttgtctgtgtttatggaggaacaggaatc
agtgaacagatagctgaactcaaaagaggtgctgaaattattgtttgcacacctggacgt
atgattgacatgttagcagctaacaatggtcgggtgacaaacctccgtagagtcacgtac
gttgtacttgatgaagctgacagaatgtttgacatggggtttgagcctcaggtcatgcgc
attgtagacaacgtcaggcctgaccgtcagactgtcatgttctctgctactttccccaga
gctatggaggccctggctcgcaggatcctcagcaaacccatagaggtgcaggttggaggc
agaagtgttgtctgttctgatgtggagcagcacgtgattgtcatagaagaggagaataaa
tttctgaagttgctggagctactgggacattatcaggagaaaggatctgttatcatattt
gtagataagcaagaacacgctgatggattgttgaaagatttaatgagggcctcttatcct
tgcttgtctctccatggaggtattgatcagtatgacagagacagcatcattaatgacttc
aagaatggaacctgcaaacttctggtggccacgtctgtagcagcaaggggcttggatgtg
aagcagctgatgctggtggtcaattacagctgtcccaaccactatgaggattatgtgcac
cgagccggccgcactgggagagctggcaataaagggtatgcatatacattcattactgag
gatcaggcacgttatgctggtgatatcattaaggctttggaattgtctgggaatccaatt
cctcctgatttggagaagctctgggctgacttcaaagaccaacagaaggctgagggaaag
ttgattaaaaaaagcagtggattctctggcaaaggttttaaatttgatgaaacagaacag
gctttggctaatgaaagaaagaagctacaaaaagcagctcttggcttgcaagattcagat
gatgaagatacagctgttgatattgatgaacaaattgaaagcatgttcaattcaaagaaa
agagtaaaagacatggcagcaccaggaacatcaaatgctcctacaccatcagctggaaat
gcagaaaaattggaaattgctaaaagattggctttgagaatcaatgcccagaagaatctt
ggagcagaggcacaagtcatggttcccttccactttaaggatgtgatgcagcaggctaca
aatgctatcctgagaggaggcactattcaagctcctactgtgtctgccaagaccattgca
gagcaactggctgaaaaaatcaatgccaagctcaattatgtacccatagagaagcaggag
gaagagaaacaggatggaggacagaatgaatccttcaagagatatgaagaagaattagag
atcaatgacttcccacagactgccagatggaaagttacctccaaagaagcactgcagaga
atcagtgaatattctgaagctgccattacaatcaggggaacttacttccctccaggcaaa
gaacccaaggaaggagaacgaaagatttatttggctatagaaagtgccaatgaacttgct
gtacagaaagcaaaggcagaaatcacacgacttataaaagaggagctcatcagattgcaa
aattcttaccaaccaaccaacaaaggaagatacaaggttctatga
DBGET
integrated database retrieval system
