Geospiza fortis (medium ground-finch): 102037974
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Entry
102037974 CDS
T03755
Symbol
CWC22
Name
(RefSeq) CWC22 spliceosome associated protein homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102037974 (CWC22)
Spliceosome [BR:
gfr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102037974 (CWC22)
Complex C
U4/U6.U5 tri-SnRNP related factors
102037974 (CWC22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MA3
MIF4G
PRP38
Motif
Other DBs
NCBI-GeneID:
102037974
NCBI-ProteinID:
XP_005415951
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All DBs
Position
Un
AA seq
713 aa
AA seq
DB search
MKSRVTQVNHGSSHDRRENHSSRHESLSPEDSRDMERDRSRSRSPRKRRYSDDSRYDEEY
SRREYYDDRTSDGRRMERGRDRHYERWEDREYDRRKQRRYSSPDRRSPERSTGQSSLAHD
ETTSKKKKEEVDPILTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLVN
KVNVSNIENIIHELLQENIVRGRGLLSRSILQAQSASPIFTHVYAALVAIINSKFPNIGE
LILKRLILNFRKGYRRNDKQLCLTSSKFVAHLMNQNVAHEVLCLEMLTLLLERPTDDSIE
VAIGFIKESGLKLTEVSPRGINAIFDRLRHILHESKIDMRVQYMIEVMFAVRKDGFKDHP
IIPEGLDLVEEEDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKMLKKEILDEGDT
ESEGNQEAGSSEEDEEDDEEEDEDGQKVTVHDKTEINLVSFRRTIYLAIQSSLDFEECAH
KLLKMDFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEAIFKEQYD
TIHRLETNKLRNVAKMFAHLLYTDSIPWSVLECIILSEETTTSSSRIFVKIFFQELSEYM
GLPNLNARLKDVTLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKLI
MTQKQNVESSDSSSSSDTDSSSDSDSDSSSSSSESSSSSDSSSSSDSSSDSGI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcagggtgacacaagtaaatcatggttccagtcatgacaggagggaaaaccac
agttcccgacatgaaagtttgtctccagaggacagcagggatatggaacgcgataggtct
cggtctcgatctcccaggaagaggagatactctgatgacagcagatatgatgaggaatat
tcaagacgggaatactatgatgacagaacttcagatggaagaaggatggaaagaggaaga
gacagacactatgagagatgggaggacagagaatatgatcgaaggaagcagagacgatac
tcatcacctgaccgcaggagtccggaaaggtcgacaggccagagctcacttgctcatgat
gagaccacctcaaagaagaagaaagaagaagtggatccaatcctcactcgcacaggtggt
gcatacattccacctgccaagctcaggatgatgcaagagcaaatcactgataaaaatagt
ttggcgtaccagaggatgagttgggaagcattgaagaagtcgatcaatggtcttgtcaac
aaagtgaacgtttctaatatagaaaacatcattcatgagctccttcaggagaatattgtt
cggggaaggggattgctgtctagatccattttgcaagctcagagcgcctctccaattttt
actcacgtttatgcagctcttgtggcaatcatcaattccaagtttccaaatattggtgaa
ttgatcctcaagaggctgatattgaatttccgtaaagggtatcgcagaaatgacaagcaa
ctctgtctaacatcttcaaaatttgttgcacatttgatgaatcagaatgtggctcatgag
gttttatgtttggaaatgctcactttgctgcttgaaaggcctactgatgacagtattgaa
gtagcaattggatttattaaagaaagtgggctcaaattaacagaagtttctcctagaggt
attaatgcaatctttgatcgccttcgacacattctgcatgaatccaaaattgatatgcgc
gttcagtacatgatagaggtcatgtttgctgtacggaaggatggcttcaaggatcatcca
atcattccagagggattagatcttgtggaagaggaagatcagtttactcatatgttgcca
ttggaagatgactacaacccagaggatgttcttaatgttttcaagatggatccgaacttt
atggaaaatgaagagaaatacaaaatgctgaagaaagaaattcttgatgaaggtgacact
gaatctgaaggaaatcaagaagctggaagtagtgaagaagatgaagaagatgatgaagag
gaggatgaggatggtcagaaagttactgtccatgacaaaacagaaattaacctggtctcc
ttccgtcgtacaatttatctggctattcagtcaagcttagactttgaagaatgtgctcac
aaactgctgaagatggatttcccagaaagtcagactaaagagctctgcaatatgatactt
gactgctgtgctcagcaaagaacatacgagaaattctttgggttactggcagggcgtttc
tgcatgctcaagaaagaatacatggagtcctttgaagccattttcaaggagcagtatgat
accattcatcggctggaaaccaacaaactgaggaatgtggccaagatgtttgctcatctg
ctgtacactgattcaattccctggagtgtccttgaatgtataatactgagtgaagaaact
accacatcgtccagtagaatttttgtcaaaatattctttcaggaactcagtgaatatatg
ggacttccaaatttaaatgcaagattaaaagatgtgacactgcagcctttctttgaggga
ttattgcctcgggataacccaaggaacactcgctttgccatcaatttcttcacttccatt
ggccttggaggactaacggatgaattacgggaacatcttaaaaatgcaccaaagttgatc
atgacacagaagcaaaatgttgagtcatcagattcctcctcatcttcagacacagactct
tcctcagattctgattctgacagcagcagtagtagctcagagtcatcgagcagcagtgac
tcctcatctagcagtgacagcagcagtgactcaggtatttaa
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