KEGG   Geospiza fortis (medium ground-finch): 102040041Help
Entry
102040041         CDS       T03755                                 

Gene name
TGM2
Definition
(RefSeq) transglutaminase 2
  KO
K05625  
transglutaminase 2 [EC:2.3.2.13]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
Enzymes [BR:gfr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.13  protein-glutamine gamma-glutamyltransferase
     102040041 (TGM2)
Cell adhesion molecules and their ligands [BR:gfr04516]
 2. Integrin Family
  Beta1 integrins
   VLA-4
    ITGB1; integrin beta 1 [KO:K05719]
     102040041 (TGM2)
   VLA-5
     102040041 (TGM2)
   VLA-9
     102040041 (TGM2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 714 aa AA seqDB search
MGTASPPCQASGVPDVSQLRAVPAPAFADLVLETWDLHCDRNGREHRTADMGCKQLVLRR
GQPFSITLRFSGRAYDEGVDKLSFNVETGPCPSETSGTQSHFAMSDCPEESCWSAVVQQQ
DGESLSVSLCSPPDARIGRYRLTLETCTDYQGSSYQIGDFILLFNPWHPEDTVFMRDENE
RREYVLSQDGLIFQGTCDYIYSIPWNFGQFEDEVLAICLKMLDINPKHLRDQNRDCSRRN
DPVYIGRVVSAMVNCNDEDRGVLFGRWDDRYEDGMSPMAWIGSVDILKRWKNFGCQPVKY
GQCWVFAAVACTVMRCLGIPSRVVTNYNSAHDTNANLTIDRYINERGQQERQSWDKIWNF
HCWVESWMTRPDLGAVYDGWQVLDPTPQEKSEGVYCCGPAPVKAIKEGDMLLKYDIPFIF
AEVNADVVYWVVQGDGMQKQSIRSSDVGKFISTKSIGRDSREDITHNYKYPEGSEEERAV
FEKAEHQKKSIGEEDEGLHLRIKVSEGANKGSDFDVFAVVNNNTDEERVCRVTLCARATS
HNGTLGPQCGLTDPVDIDIEPRAEKRVPLRILYEEYRDKLTQDNLIKVVALLNDHQTGDI
LVAVRDIYVENPPIKIRILGEPMQNRKLVAEISLVNPLTVPLNGCVFVVEGTGLTQGQLV
KELEEPVEPQAEAKFRMDLMPRLSGLQKLMVDFESDQLTGVKGYRNVIIAPQPL
NT seq 2145 nt NT seq  +upstreamnt  +downstreamnt
atgggcacagccagccctccttgccaagcctcgggagtgcccgacgtgtcccagctcaga
gctgtacctgcccctgccttcgcagacctggtgctggagacgtgggacctgcactgcgac
cgcaacgggcgggagcaccgcacggcggacatgggctgcaagcagctggtgctgcggcgg
ggacagcccttcagcatcaccctgcgcttctcgggacgcgcctacgacgagggcgtggac
aaactctccttcaacgtcgagaccgggccctgtcccagtgagacatcaggaacccagtcg
cactttgccatgagtgactgccccgaggagtcgtgctggagtgccgtggtgcagcagcag
gacggggagtccctctctgtgtccctctgctccccacccgacgcccgcatcggccgctac
agactgaccctggagacctgcaccgactaccagggctccagctaccagatcggggacttc
atcctgctcttcaacccctggcacccagaggacacggttttcatgcgtgacgagaacgag
cgccgtgagtacgtcctgtcccaggacgggctgatcttccagggcacctgtgattacatc
tactccatcccctggaacttcggccagtttgaggatgaagtcttggccatctgcctcaag
atgctggacataaaccccaaacacctgagggaccagaaccgggactgctcccgccgcaat
gaccccgtgtacattggcagggtggtgagcgccatggtgaactgcaatgacgaggaccgg
ggggtgctgtttgggcggtgggacgatcgctacgaggatgggatgagccccatggcctgg
attgggagcgtggacattctcaagaggtggaagaattttgggtgccagccagtcaagtat
ggccagtgctgggtctttgctgctgtggcttgcactgtcatgaggtgcctggggatcccc
agccgggtggtgaccaactacaactcagcccatgacaccaacgccaacctgaccatcgac
cgctacatcaacgagcggggccagcaggagaggcaatcctgggacaagatctggaacttc
cactgctgggtggagtcgtggatgacccgtccagacctgggagctgtctatgacgggtgg
caggtgctggacccgacccctcaggagaagagtgaaggagtttactgctgcgggccagcc
cctgtcaaagccatcaaagagggtgacatgctgctcaagtacgacatccccttcatcttc
gccgaggtgaacgccgacgtggtgtactgggtggtgcagggtgacgggatgcagaagcag
agcatccgttcctcagacgtggggaagttcatcagcaccaagagcataggcagggacagc
cgggaggacatcacccacaactacaaatacccagaggggtctgaggaggagcgggcagtg
tttgagaaggcagagcatcagaagaagtccattggggaggaggatgaggggctgcacctc
aggatcaaggtgtcagagggtgccaacaagggcagtgacttcgatgtctttgctgtggtc
aacaacaacacggacgaggagcgtgtctgcagggtgacactgtgtgcccgtgccaccagc
cacaacggcaccctcgggccccagtgcggcctcactgacccggtggacatcgacattgag
cccagggcagagaagagggtgcccctgcgcatcctgtacgaagagtacagggacaaactg
acccaggacaacctcatcaaggtggtggctctcctgaatgatcaccagactggcgacatc
ctcgttgctgtcagggacatttatgttgagaatccaccgatcaagatcaggattttaggg
gagccaatgcagaatcggaagctggtggccgagatcagcctggtgaaccctctcaccgtg
cccctgaacggctgtgtgttcgtggtggagggcaccggcctcacccaggggcagctggtc
aaggagcttgaggagccggtggagccgcaggcagaggccaaattccgaatggatctgatg
ccgcggctgtcggggctgcagaagctgatggtggactttgagagcgaccagctgacgggg
gtcaagggctaccgcaacgtcatcatcgcaccccagcccctgtga

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