Geospiza fortis (medium ground-finch): 102040049
Help
Entry
102040049 CDS
T03755
Symbol
SETD1B
Name
(RefSeq) SET domain containing 1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00310
Lysine degradation
gfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102040049 (SETD1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102040049 (SETD1B)
Enzymes [BR:
gfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
102040049 (SETD1B)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102040049 (SETD1B)
HMT complexes
COMPASS/SET1 complex
102040049 (SETD1B)
COMPASS/SET1 complex (yeast)
102040049 (SETD1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
102040049
NCBI-ProteinID:
XP_014163703
LinkDB
All DBs
Position
Un
AA seq
1934 aa
AA seq
DB search
MLTDRWINGMENSTQASTSVEKRNHHWRSYKLIIDPALKKGQHKLYRYDGQHFSMPNSGI
APVDCVRDPRIGRIWTKTKELELSVPKFKIDEFYVGPVPPKQVTFAKLNDNIRENFLADM
CKKYGEVEEVEILYNPKNKKHLGIAKVIFATVKGAREAVQHLHNTSVMGNIIHVELDTKG
ETRMRFYELLVNGLYTPQTLPVGTEQDVSPTGNEALQLTDSLKRLKDSSLSSAGSSVTPN
SSTPFSHDTAYSSCRQDTPNSYSQFTPQSQGTPHTPRLGTPFSQDSTYSSRQTTPVYHFG
QDSGYKPRRHETKFTDAYNRRPGHHYMHNSAGVFRGTEHQFSTFKSHQQEPVQFSHTPPL
SHSSSSSYKSAFSPYQAPAVFPQSEEQPFPQTSRETEYRRPAPPPTEMVVESSTAPSIDF
VPVKEKPEEPPPLPDSNSVPEPSTASFSQTPERSETPGTPTMETEMQHNSLDSRIEMLLK
EQRTKLPFLNEHDSDNEIRMEGSPISSSSSQLSPIPTYGSNSQPGFRGQTPSSRPSSTGL
EDISPTPLPDSDDDEPIPGTASLSQNSRGTSEASMTPIDQLSRTSKTETLEAKEMVPGDQ
TPTSEKMDEGQHSSGEDMEISDDETNPAPITSAECAKTIVVNSSVSNTAVMAPSIPPLPP
HILPPLPPFHPGMFPVMQVDMISVLGNQWGGMPMSFQMQTQMLSRMMQAQNTYQYPPFMT
GRMQFVNLPPYRPFSMGAALARGQQWPPLPKFDPSVPPPGYEPKKEDPHKATVDGVLLVI
VKELKAIMKRDLNRKMVEVVAFRAFDDWWDKKERLAKASLTPVKSGGEVEEKPKPKDRMA
SCLLENWNKGEGLGYEAIGLGIGLRGAIRLPSFKVKRKEPPEAASAGDQKRIRPSTSVDD
EDEESERDRDASDTTSDLSKKDAESVGLRRRPARPLELDSEGEEGDETSGXEEESSSEKE
EEQEEEGGLVKAAPGKEEEEDEEDEDDEDEDDEDEDEDDEEETGIDTSDKEEEQDSEEDV
ASPSSSKAEAESSDESEDSSEFESSSDSDDEDEEDDDDDEEEEEEEEEEVAEDQGREAMV
AEPEQEPAGHELPDDERETILDLYPVDDYMDATGLGLAEPALAVKDEGSEEIKAGDSECG
QVLGASVAAETLKHLVLERDQETKLALSPICRPEEEPEPTPMLEPEVQEGPKPESQDEEA
SLCISAPGGVFGEPLPSKSSFFGKSEESSLEGRVKAKPPSAAEEEERLPRTPGREVLIHS
DTETVLLPAHKVPSSMLPLPSTPGKEESLVPPEKFPEQLMVTKTSVEEEIPRTPGRDILA
KSSHPLTKSQSTDTVPATPGSDAPLTGSSLTLSSPQVPGSPFSYPSQSPGINSGIPRTPG
RDFNFTPTFPEAGATIPCLLPGKKQSEDELEEKTFKEPLGASLTISMNSVPSPIPFASPP
QADFHMDMALPPDEPIPVAALPCMHGDGRMPIEECKAEVKPGLLSPEVPPGASILPPPPP
PSVLPKRRPGRPRRSPPSVLSLDVYSGKTIEPPPMPVALVEGAVGKELLSGHPDAYYGLK
DPEAITLDFRNDSFHEKIAAETVAEKLPFKELENQWNEDFKEEEAHAKPKRQWRRQKKSE
ELPVIPSPEYSPPQPQFRPRSEFEEMTILYDIWNGGIDEEDIKFMCITYDRLLQQDNGMD
WLNDTLWVFHPSTSFSTPKKKKRDDGMREHVTGCARSEGYYKIDKKDKLKYLNNSRAFAE
EPPADTQGMSIPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFC
KSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTII
DATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYDYKFPIEDVKI
PCLCGSENCRGTLN
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atgttgactgaccgttggatcaacggaatggagaacagcacgcaagccagcacttctgtc
gagaaaagaaatcaccattggagaagttacaagttgattattgacccggctctgaaaaaa
ggacagcacaaactctaccgttacgatgggcaacatttcagcatgcctaactcggggatc
gctcctgtggattgtgtcagggatcccagaatagggcgaatatggaccaaaactaaggag
ttggagctgtctgtccccaaattcaagattgatgaattttacgtggggccagtgcctccc
aagcaggtcacctttgccaagctgaacgacaacatccgtgaaaactttttggccgacatg
tgcaagaaatacggcgaagtggaagaggtggagattctctacaaccccaagaacaagaag
cacctgggcattgccaaagtcatctttgccactgtcaagggtgcccgggaggctgtgcag
caccttcacaacacttctgtcatgggcaacatcatccacgtggagctggatacaaaaggt
gaaacccgcatgagattctatgaactgctggttaatggtctttacactcctcagaccctc
cctgtaggcactgaacaggacgtgtccccaactgggaacgaagctctccagttgacggac
tccctgaagcgcctgaaggacagctccctctcttccgcgggatcctccgtcaccccaaac
agcagcacgcccttttcccatgacactgcctattccagctgccggcaagacaccccgaac
tcctacagccaattcaccccccagtcccaaggaacaccccacaccccgcgcctggggacg
cccttctcccaggactccacctactccagccgacagacgacccctgtgtaccactttggg
caggacagtggctacaaaccccggaggcacgagacgaaatttacggatgcgtacaaccgt
cgccccggacaccactacatgcacaactcggcaggggtgttccgaggcacagagcatcag
tttagtacgttcaaatcccatcagcaggagcctgttcagttctctcacactcctcccctg
agccactctagttcttcgagctataaatctgccttctccccctatcaagcaccagctgtt
tttccccagtccgaggagcagccgtttccccagacttccagggagacagagtacaggaga
cctgcaccgcctcccactgagatggttgtggaaagcagcactgcccccagcatcgatttt
gtcccagtgaaggagaaaccagaggagcctccgcccttgcccgactcgaactctgttcct
gaaccaagcacagcgtccttctctcagactccagagaggagtgagactcctggcaccccc
accatggagactgagatgcagcataacagtttagactcaaggattgagatgctcttaaaa
gagcagagaacaaaattaccctttcttaacgagcatgactcagataatgagatcagaatg
gaaggtagccctatttcctcctcttcttcccagctctcccccatcccaacatacggttcg
aactcgcagcccggtttcaggggtcagacgccttcctcgcgcccttccagcacaggcttg
gaggacatcagccccacacccttacctgactctgatgatgatgagcccatccctgggaca
gcttctctgagtcagaattcccgggggacatcggaggccagcatgactcccattgatcag
ctgagcaggacctccaaaactgagaccttggaggctaaagaaatggtgcctggtgaccag
actccaacgtcagaaaaaatggatgagggtcagcattcctcaggggaggacatggaaatc
tctgacgacgagaccaaccctgcgcccatcaccagcgcggaatgtgccaaaaccattgtg
gtgaactcctccgtcagcaacacggccgtgatggccccatccatccccccgctcccgccc
cacatcctgcccccgctgccccccttccaccccggcatgttcccagtcatgcaggtggat
atgatcagcgtcctgggcaaccagtggggcggcatgcccatgtccttccagatgcaaact
cagatgctgagccgcatgatgcaggcgcagaacacgtaccagtacccgcccttcatgacg
ggccggatgcagtttgtgaatctccctccctaccgccccttctccatgggagccgctctt
gcccgcgggcagcagtggccgcctctgcccaagtttgacccctcagttccacccccgggc
tatgagcccaagaaggaagatccccacaaagccacggtggatggagttctcctggtcata
gtgaaggagctgaaggccatcatgaaaagggacctgaatcgcaagatggtcgaagtggtg
gcattccgggcgtttgatgattggtgggacaagaaggagcgtctggcaaaagcatctctc
actccagtgaagtctggaggagaagtggaggaaaaaccaaagccaaaggatcgaatggcc
tcttgtctcctggagaactggaacaaaggagaagggctgggctacgaggccatcggcttg
ggcatcggcttacgaggggctatccgcctgccatccttcaaggtgaaaagaaaggaacca
cctgaagctgcctcagcgggagatcagaagagaatccggccttctacttctgtggatgat
gaagatgaagagtcggagagggacagggatgcttctgatacaacatctgacctgtcaaag
aaggacgcagagtctgtggggctgcgacggcgaccagcaaggccattggagctcgacagc
gagggagaggagggagatgagacatcagggtaagaggaagagtcctcctcagagaaggaa
gaggagcaggaagaagagggaggcttggtgaaagcagcacctggcaaggaggaagaggag
gatgaggaggatgaagatgatgaggatgaagatgacgaagacgaggatgaagatgatgag
gaggagacaggcatagacacaagtgacaaggaggaggagcaggactccgaggaggatgta
gcaagtccctcgtcttccaaggctgaagctgaatcatctgatgagagtgaggactcctct
gaattcgagtcaagttcagactcagatgatgaagatgaggaggatgatgatgatgatgaa
gaggaggaggaagaagaggaggaagaggtggctgaagatcaaggcagagaagccatggtt
gctgagccagagcaggaacctgctggtcatgagcttcctgatgatgagagggagactatt
ttggacctgtatcctgtggatgactacatggatgcaacaggcctgggacttgctgagcca
gctttggcagtgaaagatgaaggcagtgaagaaatcaaggcaggggatagtgagtgtggc
caagtccttggggcttctgttgctgctgaaactctgaaacatttggttttggaaagagac
caggagacaaagcttgcactctctcccatctgtaggccagaggaagagcccgaacccact
cccatgctggagccagaggtacaggaaggtccaaagcctgaatctcaagatgaggaggcg
tctctctgtatctctgctccaggaggagtctttggagaacctctgcccagcaaaagcagc
ttctttggcaagtctgaggagagcagcttggaaggccgagtcaaagccaagccgccgtcg
gcagcggaggaggaggagcggctgccgcgcacaccggggcgggaggtgctgatccactcg
gacactgagactgtcctgctgccagcccacaaggtgccatcctccatgcttcccttgcca
tccactcccggcaaggaagagtctttagtccctccagaaaagttccctgaacaattaatg
gtgaccaaaacatccgtggaagaggagattcccaggactcctgggcgggacattttggcc
aagtcttcacatcccctcacgaagtcgcagagcacggacactgttccagccacgccagga
agtgatgctccccttacaggaagcagcttgaccctcagttcccctcaagtcccagggagc
cccttttcctacccatcccaatcccctggcattaatagtggcattcctcggactcctggg
agagatttcaatttcacgcctactttcccagaggctggtgctaccattccttgccttctg
cctggcaagaaacagtcagaggatgagctagaagagaaaacctttaaagagcctcttggt
gcttcccttacgatcagcatgaacagtgttccttcccctatcccctttgccagcccccca
caggcagatttccacatggacatggctttgccacctgatgagccaatacctgtagcagcc
ctgccgtgcatgcatggagatggaagaatgcccatcgaggaatgcaaggcagaagtaaaa
cctggtttgctctccccagaagtaccccctggggcttctattcttcctcccccaccacca
ccttctgttcttcccaaaaggaggccgggtcggccgaggcggtccccaccttctgtcctg
tcgctggatgtgtactcgggcaaaaccatagaacctcctcccatgccagtggccttggtg
gaaggtgctgtgggcaaagagctgctgagtgggcatcctgatgcctactatggactgaaa
gaccctgaagccatcaccctggacttcaggaatgacagtttccacgagaaaatagcagct
gagacagttgcagagaagctgccattcaaggaactggagaaccagtggaacgaagacttc
aaggaagaggaggctcacgcgaagcccaagcgccagtggcggaggcagaagaaatccgag
gagctgccagtgatcccttcccccgagtattccccgccccagccgcagttcaggccgcgc
tccgagtttgaggagatgacaattctgtacgacatctggaacggaggcattgacgaggag
gacatcaagttcatgtgcatcacatacgaccgcttgttacagcaggacaacggtatggac
tggctcaatgacaccctctgggttttccatccttctaccagcttttctacccccaagaag
aagaagcgggatgacggcatgcgggagcacgtgacgggctgcgcacgaagcgaaggctat
tacaaaattgataagaaggacaaactcaaatacctcaacaatagccgagcttttgcagag
gagcctccagctgacacacagggtatgagcatccctgcccaacctcacgcttccacccgg
gctggttccgagaggcgatcagagcagcgcaggctcctctcctccttcactggtagctgt
gacagtgacctgctcaagttcaaccagctcaagttccggaagaaaaaactaaaattctgc
aagagccacattcacgactggggcctttttgctatggagcccattgcagctgatgagatg
gtgatagagtacgtggggcagaacatcaggcaggtcattgctgacatgcgtgagaagcga
tacgaggacgagggcattggcagcagttacatgttcagagtcgaccacgacaccatcatc
gatgccaccaagtgtgggaacttcgccaggttcatcaatcacagctgcaatccaaattgt
tatgctaaagtgatcacggtggagtctcaaaagaagatcgttatctactccaagcagcac
atcaatgtgaacgaggaaattacctacgactacaagtttccaattgaggatgtaaaaatc
ccgtgtctctgtggctctgagaactgcaggggaaccctgaactga
DBGET
integrated database retrieval system
