Geospiza fortis (medium ground-finch): 102040573
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Entry
102040573 CDS
T03755
Symbol
SMARCA2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102040573 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102040573 (SMARCA2)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102040573 (SMARCA2)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102040573 (SMARCA2)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102040573 (SMARCA2)
Chromatin remodeling factors
BAF complex
102040573 (SMARCA2)
PBAF complex
102040573 (SMARCA2)
GBAF(ncBAF) complex
102040573 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102040573
NCBI-ProteinID:
XP_014165356
UniProt:
A0A6I9ZCQ5
LinkDB
All DBs
Position
Un
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIAGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGTAAGP
GAAPGMPGHATAITPKTWTEGQAPDMSVSNVQQKLPAPAPSGRPSPAPAAAQPAATMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRRKKAEENAEGVASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKLETDEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGEEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctgggacctagcccaggaccagggccgtctcctggctccgtt
cacagcatgatggggccaagtcctggtccgcccagtgtcccacatccaatgccaacaatg
gggcctacagattatccacaggaaggcatgcatcaaatgcataagtctattgatggctta
catgaaaaaggaatggttgaagatgttcactgtggctccatgaagagtatgcgacctcct
catcctggaatgggtccgcctcagagtccaatggaccagcatagccaaggttatatgtct
ccacatccatctccactaggagcaccggagcatgtgtccagtccaatgtctggaggaggt
ccaacaccacctcagatgactcccagtcagccaggacccattatagcaggagacccacaa
gttatgaatcagcctaacagagggccttcccctttcagccctgcacagctgcatcaactg
cgggctcagattctagcatacaaaatgctggctaggggtcagcccttgccagaaaacctc
cagcttgctgtccagggcaagagaaccctgcctggcattcaacagcagcagcctcccagt
gccttcaacaggcagtctggtattggattacatgcaatgagtggcactgctgctggacca
ggggctgcaccagggatgcctggacatgcaactgccattactcctaaaacgtggactgaa
ggccaagccccagatatgagtgtctccaatgtgcagcaaaagcttccagcgccagctcct
agtgggaggccttctcctgctcctgctgccgcccagcctgctgccaccatgcctgggccc
tctgtaccacagccccctccgggacaaccttcacccattgtccagctgcagcagaagcag
aaccgcatcagccctatccagaagccacaaggactggatcctgttgaaatactccaagaa
cgcgaatatagacttcaggctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccccctgatctgcggaccaaagctacagtggagttgaaggcccttcggtta
ctgaatttccaacgccagttaagacaagaggtagtagcctgtatgcgtcgtgacacaaca
ctggagacagcactgaactccaaagcctacaaacgaagcaagcggcagactttaagagaa
gctcgtatgacagaaaagcttgaaaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagaatac
cacaggtcagtcgctgggaaaattcagaagctttctaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaacggagagaattgagaaagaaagaatgaggaga
ctaatggccgaagatgaagagggctaccgaaaactgattgatcaaaagaaagacagacgc
ctggcctacttgttgcaacagacagatgagtatgtggctaacttgactaacctggtatgg
gagcataagcaggcacaagcagccaaagagaagaagaagcgaaggagaagaaggaagaaa
gctgaggaaaatgcagaaggagtggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagacagtgaagatgaaagtggctctgaatatgaggag
gaggatgaggaagaagaatcaagcaaattagaaacagatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaataattgagacagcaaaacaagat
gtggatgatgaatatagcatgcaatatagcgctagagggtctcagtcctactacactgtt
gctcatgctatcactgaaagggtggaaaagcagtcttcccttcttattaatggcacatta
aaacattaccagctccaaggactggaatggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactaggaaagacaatacaaactattgctctgatcact
tacttgatggagcacaaaagactcaatggcccctatctcatcattgttcccttgtcgact
ttatccaattggacatatgaatttgacaaatgggctccttcagtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacatatgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcgacgaatcctgctgactgggactcctttg
cagaacaaattgcctgaactttgggctctcctcaatttccttcttccaaccattttcaag
agctgcagcacctttgagcagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctgcataaagtgcttcggccc
ttcttgctgagaagactgaagaaggaggttgagtctcaactgccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
gggatccttctcacagatggttctgaaaaagacaagaagggaaaaggtggagcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtccttcgctgaacatctgggctactcaaatggggtcattaacggagctgaa
ctttatcgggcctccgggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagat
tactttgcatttcgaaatttcctttacctgcgcctcgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaacgaacctggatcacaatactttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgttataatcttt
gacagtgactggaatcctcatcaggacttgcaggcccaggatagagctcaccgaattggg
cagcagaatgaagttagagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgcagcaaaatataagctgaatgtagatcaaaaagttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaaggagagctttcctccaagctatattggagcatgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagacactgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccctaaacgtaaacctcgcttgatggaggaggatgaattgccatcctggatt
attaaggatgatgctgaagttgaaaggctcacatgtgaagaagaagaagagaaaatattt
ggaagaggatcccgtcagcgcagggatgtggactacagtgatgctctcacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aagcgaaagagacgaagaaacgtggataaggactctggggaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcacccaatccacccaaattgaca
aaacaaatgaatgccatcattgatactgtcataaactacaaggatagttcaggacggcag
ctaagtgaagtcttcattcagctcccgtctaggaaagaactaccagagtattatgaattg
attaggaagccagtggacttcaaaaagataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttggaaaaagatgtcatgttgctgtgtcacaatgcacagacattcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagcgaggatgaaagcaatgatgatgaagaagaa
gatgaggaagaagaatcggaatcagaatctaaatcagtgaaggtcaaaatcaagttgaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgttgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
