Geospiza fortis (medium ground-finch): 102040575
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Entry
102040575 CDS
T03755
Symbol
SPECC1L
Name
(RefSeq) sperm antigen with calponin homology and coiled-coil domains 1 like
KO
K23028
cytospin
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gfr04812
]
102040575 (SPECC1L)
Cytoskeleton proteins [BR:
gfr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
102040575 (SPECC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
ATG17_like
TMF_DNA_bd
Globin
Motif
Other DBs
NCBI-GeneID:
102040575
NCBI-ProteinID:
XP_005428488
LinkDB
All DBs
Position
Un
AA seq
1082 aa
AA seq
DB search
MKKASRSVGSVPKVPGVNKAQTSEKAKPENGSSVSAVTKLSKTGTSASLLKTKSNDDLLA
GMAGGGGVTMTNGVKAKKNSCVSTAPSAPGATMSTLENKPKTIAGTSSTAKRSTSSGNKE
SSSSRERIRERSRLSQSKKLPLAGQGPGDAGLAKRSRSRTNPDSDVRMSKSKSDNQISDR
AALEAKVNDLLTLAKTKDVEILHLRNELRDMRAQLGLNEDHLEGDEKSEEKEAIVVHQPT
DVESTLLQLQEQNTAIREELNQLKNENRMLKDRLNALGFSLEQRLDNSEKLFGYQSLSPE
ITAGNHSDGGGTLTSSVEGSAPGSMEDLLSQDENTLMDNQHSNSMDNLDSECSEVYQPLT
SSDDALDAPSSSESEGVPSIERSRKGSSGNASEVSVACLTERIHQMEENQHSTAEELQAT
LQELADLQQITQELNSENERLGEEKVILMESLCQQSDKLEHFSRQIEYFRSLLDEHHISY
VIDEDMKSGRYMELEQRYMELAENARFEREQLLGVQQHLSNTLKMAEQDNKEAQEMIGAL
KERNHHMERIIESEQKSKTALASTLEEYKATVASDQIEMNRLKAQLEHEKQRVAELYSIH
NSGDKSDIQDLLESVRLDKEKAESLASGLQEELAHTRNDANRLQDAIAKVEDEYRVFQEE
AKKQIEDLNVTLEKLRTELDEKETERSDMKETIFELEDEVEQHRAVKLHDNLIISDLENT
VKKLQDQKHDMEREIKNLHRRLREESAEWRQFQADLQTAVVIANDIKSEAQEEIGDLKRR
LHEAQEKNEKLTKELEEIKSRKQEEERGRVYNYMNAVERDLAALRQGMGLSRRSSTSSEP
TPTVKTLIKSFDSASSQVPSPAAATIPRTPLSPSPMKTPPAAAVSPMQRHSISGPISASK
PLATLTDKRPSYAEIPVQEHLLRTSSTSRPASLPRVPAMESAKSISVSRRSSEEIKRDIS
APDGASPASLMAMGTTSPQLSLSSSPTASVTPTTRSRIREERKDPLSALAREYGGSKRNA
LLKWCQKKTEGYQRRNFTLAFQAAESVGIKSTLDINEMVRTERPDWQNVMLYVTAIYKYF
ET
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcaagcaggagtgttggctcagtgcccaaagtgcctggagtaaataaagct
caaacaagtgaaaaagccaaaccagaaaacggctcctcagtgtctgcagtaacaaaactc
tccaaaactgggacatcagcatctcttttgaagactaagagtaacgatgacctcttagca
gggatggctggtggcggcggagtgacaatgaccaacggtgtcaaggccaagaagaactct
tgtgtatcaacagcaccttcagctccaggggcaaccatgagcactctagaaaacaaaccc
aaaactattgcaggtacaagttccacagctaaacgtagcacttcctctggaaataaagag
tccagctcttccagggagaggatccgggagcgttcccgtctgagccagagcaagaagctg
cccctggcagggcagggccccggcgacgcggggctggccaagcgctcccgcagccgcacc
aaccccgactccgacgtccgcatgagcaagtccaagtcagacaatcagatcagtgacaga
gctgcgctggaagcaaaggtgaatgatcttctgaccttagcaaaaactaaagatgtggag
atcctgcatctgagaaatgaattgagggatatgcgtgctcagctgggactcaacgaagat
catcttgagggggatgaaaaatctgaagagaaagaagccattgttgttcatcagccaact
gatgtagagtctacgctgctccagttacaggaacaaaacactgccatcagagaagagctc
aaccagctgaagaatgagaatcgaatgttaaaagacagactaaatgctttgggcttttct
ttggaacaaaggctggacaactctgaaaagctctttggctatcagtctttgagtccagag
attacagctggcaaccacagcgatggtgggggcactctgacatcttcagtggaaggttct
gctcctggatcgatggaagacttgttaagtcaggatgaaaacactctcatggacaaccaa
cacagtaattccatggataatttagacagtgagtgcagtgaagtttatcagccactgaca
tcaagcgatgatgccttagatgctccgtcatcttcagaatctgagggagtaccaagtata
gaaaggtctaggaagggaagcagtggcaatgcaagtgaggtgtctgtagcctgtctgaca
gaacggatacatcagatggaagagaaccaacacagtacagctgaggagctccaggccacg
cttcaagagcttgcagatctgcaacaaataacacaagagctgaacagcgagaatgaaaga
cttggagaggagaaggtaatcctgatggagtctttgtgccagcagagtgacaaactggag
cacttcagccgtcagatcgagtatttccggtcccttttggatgagcaccacatttcctat
gtgattgatgaagacatgaagagcgggcgctacatggagctggagcagcgctacatggag
ctggcggagaacgcgcgcttcgagcgggagcagctgctgggcgttcagcagcacttgagc
aacactttgaagatggcagaacaagacaacaaggaggcccaagagatgataggggcgtta
aaagaaaggaatcaccacatggaacggattattgagtcagagcagaaaagcaaaacagct
ctggcatccaccttagaggagtacaaagccacagtagccagtgaccagatcgagatgaac
aggctgaaagctcagctagagcacgaaaagcagagagtggccgagctgtattccatacac
aactctggagataaatcagatatacaagacctgctggagagtgtcaggctggataaggaa
aaagcagagagcttggccagtggtctgcaggaggagctggcacacacccgcaatgatgcc
aatcgattgcaagatgccattgctaaggttgaagatgaatacagagtgttccaagaagaa
gccaagaaacaaattgaggatctcaatgtgactctagaaaagcttcggacagagctggat
gaaaaagagactgagaggagtgacatgaaagaaaccatctttgagctggaggatgaagta
gagcagcaccgtgctgtgaagcttcatgacaatcttatcatatctgatttggagaataca
gttaaaaaacttcaggatcaaaagcatgacatggaaagagagatcaagaatcttcacagg
agactccgggaggagtcagcagaatggcgccagttccaggcagacctgcagactgcagtg
gtcattgccaacgacatcaagtccgaggcgcaggaggagatcggggacctgaagcgcaga
ttgcacgaggcgcaggagaaaaacgagaaactcaccaaggagctggaggagataaagtca
cgcaagcaggaagaagaacgcggtcgagtgtacaattacatgaatgcagtagagagagat
ctggcagctctgaggcaaggcatgggcctgagtcgccgatcctccacctcctcagagccg
acccccactgtgaaaacgctcatcaagtccttcgacagtgcctcctcccaagttcccagc
cctgctgctgccacaattcctcgcactcccctgagcccaagccccatgaaaactccccca
gccgctgctgtatcccccatgcagaggcattccataagtgggccaatctcagcttcaaaa
ccccttgctacactgacagacaaaagaccaagctatgcagaaattcctgttcaagagcat
ttgctgagaacatcctccaccagccggccggcgtctctgcccagggtccctgccatggaa
agtgccaaatccatttcagtgtctcgaagaagtagtgaggaaatcaagagggacatcagt
gcacctgatggagcatccccagcatctctcatggcaatgggcaccacctcaccacagctg
tccctctcatcttctcctacagcatcagtcacccctacaaccagaagcagaataagggaa
gagaggaaggatcccttgtctgccctggcaagagagtatggaggctccaagaggaacgcc
ctgctgaagtggtgccagaagaaaacagagggctaccagagaagaaatttcactttggct
tttcaggcagctgaaagtgttggcatcaaatcgactctggacatcaatgaaatggtgcga
acggagcgtccagactggcagaatgtcatgctgtatgttacagccatttacaaatacttt
gaaacctga
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integrated database retrieval system
