Geospiza fortis (medium ground-finch): 102040610 Help Entry 102040610         CDS       T03755                                  Symbol COL19A1 Name (RefSeq) collagen type XIX alpha 1 chain   KO K24340   collagen type XIX alpha Organism gfr  Geospiza fortis (medium ground-finch) Brite KEGG Orthology (KO) [BR:gfr00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gfr00536]     102040610 (COL19A1) Glycosaminoglycan binding proteins [BR:gfr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102040610 (COL19A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Laminin_G_3 DUF4901 DUF825 Motif Other DBs NCBI-GeneID:  102040610 NCBI-ProteinID:  XP_014162755 LinkDB All DBs Position Un AA seq 1120 aa AA seqDB search MKYIGSCIVWLCMAVFLLPVSTSLAVSDHTGAVCPLMKTVSRHLKQINRDSRGVSGFDLA ESFSLRQTSCGGEKICFKLGSAPLIRDTRQVFPNGLPEEYSLVATFRVRRNTKKERWYIW QVLNQYDTPEISVLLDGTKKVVEYMTKSSQGNILHYTFKSREIYPLFDRQWHKLGISVQS GIISLYLDCNLIERKQTDEKFTIDLQGRTLIASRAADDKPVDIELHHIAVYCNSQLAVED TCCEISADLCPREERLLATTPSPVTVHASKIYTLPGMQQESTQRCYCFPNKGEAGLPGVA GLPGQKGEKGEKGEMGVKGPDGVAGLPGEKGERGFPGSKGEEGEKGEKGDKGEPGPEGLP GTEGLKGDPGSPGVAGPKGEKGDAGPPGPAALSGLLEGPQGPPGKEGQRGRRGKPGLPGK PGPPGPPGPSGLKGILDSLNKHYNESDARLLGVLGTSGLKGQKGDVGQKGELGMTGAKGE KGEPSEKGDKGDPGETGMEGSKGNKGEMGDPGPPGLIGNPGSKGLQGPPGPVGPRGLPGE AGLPGDPGVPGNPGIKGDKGDPGGIMGPPGHPGPKGDMGPPGPSLPGTPGPTGVPGNPGP RGPKGERGLPGVQGAPGEMGPPGIGIQGSPGPIGPTGSAGVQGPRGPPGLPGAPGTPGIN GAPGRDGKPGLPGPPGDPVALPLVGDMGAILKGDPGTRGPPGIPGREGPKGSKGERGFPG LVGEKGDEGLQGAPGLPGVSGPSGPSGVPGRPGHPGPAGAKGEKGSEGSPGKPGPPGPPG MPYNERNGMSSLYKLQGGVSVASYPGPPGPPGPKGDPGTAGDPGPMGLPGLEGLPGEKGD RGPAGAPGVSGTPGKPGSPGSPGLPGEPGERGPIGDIGFPGPEGPQGKPGINGKDGLPGP PGAVGRPGDRGPKGERGDPGIPGDRGPQGERGKPGPSGEKGDVGPVGPPGDRGYPGSPGH QGPPGSPGPPGFPADAISLEEIKKYIKQEVLKVFEERMGQFVSQLKLPAAMLASQAHGKP GPPGKDGSPGPPGKDGLPGPPGERGIQGYRGQKGERGEPGIGLPGNPGPPGPAAAGLPGP PGASGSPGPQGPPGASGRCNPADCYSHVSQTHSRTSNKLI NT seq 3363 nt NT seq  +upstreamnt  +downstreamnt atgaagtacattggatcctgcatagtttggctttgtatggcagtcttcctccttcctgtt tctacttctctggctgtcagtgaccacacaggtgctgtgtgtcctttaatgaaaactgtt tcccgtcatctcaaacaaatcaacagagacagtcgtggtgtatcagggtttgatctggca gaaagcttttctttaaggcaaacatcttgtggtggggaaaagatctgctttaaactggga agtgcacctctcattagagatacaaggcaagtatttccaaatgggcttcctgaagaatac tctctggttgctacgttccgtgtacggcgaaataccaagaaagagcgttggtatatatgg caagttttaaatcagtatgacacacctgagatctctgtcctcctggatggtacaaaaaag gtggtggagtatatgaccaaatcctctcagggaaatatactgcactacacttttaagagt cgagaaatttatccattgtttgatcggcagtggcataagcttggtattagcgtgcagtca gggatcatttccctctatttggattgtaatttaattgagagaaagcagactgatgaaaaa ttcaccattgacttgcagggaaggacactgattgcttctcgtgctgcggatgataagcct gtagatattgaacttcaccacatagcagtttattgtaattcacaacttgcagtagaagat acatgttgtgaaatatctgcagacttgtgcccacgtgaggagaggttactggctacgact ccatcaccagtgactgttcatgccagcaaaatatacacgcttccagggatgcagcaagaa tctacacagagatgctactgctttcccaataaaggagaagcagggttgccaggagtagct ggtttgccaggccagaaaggagagaaaggtgaaaagggagagatgggtgtgaaaggaccg gacggtgttgcaggtctgcctggtgaaaagggtgaacgtggctttccaggtagtaaaggt gaagaaggtgaaaagggtgaaaaaggagataaaggagaaccaggaccagaaggccttcct ggaacagagggactgaaaggtgaccctggtagtcctggtgtggctggtccaaaaggagaa aagggagatgcaggacctccaggaccagctgccttgagtggtttgctggagggtccccaa ggtccacctggcaaagaaggtcagaggggcagacgaggcaaaccaggccttccaggaaaa ccagggccaccaggacctcctggcccatctggactaaaaggaatcctggattcattgaac aagcattataatgagagtgacgcaagactactgggagtacttgggacctctggacttaaa ggccagaaaggagatgttggtcaaaaaggagaattgggaatgactggtgcaaaaggagaa aagggagagccttctgaaaaaggggacaaaggagacccaggagagactggaatggaggga tcaaaaggaaataagggtgaaatgggagatcctggaccacctggtcttattggaaatcca ggatcaaagggactgcaaggccctccaggacctgttggacccaggggactgccaggagaa gctggcttaccaggagatcctggggtaccaggaaacccaggaattaaaggagacaagggt gaccctggtggaattatgggaccacctggacatccaggtccaaaaggtgatatggggcct cctggaccaagtctgcctggaacaccaggtcccactggtgttcctggaaacccaggtcca aggggtccaaagggagaaagaggactacctggtgtacagggagcacctggggagatgggg ccccctggaataggcattcagggatcaccaggtcctataggtccaactggatcagcaggt gtgcagggccctaggggacctccaggattaccaggagctccaggtacccctggtattaat ggcgctccaggaagagatggaaaaccaggactgccaggccctccgggtgatcctgttgca cttccacttgtgggagacatgggtgctatactgaagggtgatcctggcacaagaggtcct ccaggcattcctggcagagaaggaccaaaaggaagcaaaggtgaacgtggatttcctggg cttgtgggggaaaagggcgatgagggtctccaaggtgctcctggactgccaggtgtatca ggacccagtggcccatccggagtcccaggaagacctgggcatcctggtccagctggagca aaaggagaaaagggtagcgaaggttctcctgggaaacctggaccacctgggcctccgggt atgccttacaatgaaagaaatggaatgagcagcttatataaactgcagggaggagtgagt gtcgcgagttatccaggtccaccaggacctccaggtccaaaaggggatcctggaacagcg ggagacccaggacccatgggattaccaggactggaaggactcccaggggaaaagggtgac cgtggaccagctggagcaccgggagtgtcagggacaccgggaaagccaggatctcctggg tccccaggcttgccaggagaacctggtgaaagaggacctataggagatataggcttccct ggtccagaagggccacaaggaaaaccaggaatcaatggaaaagatggattgccaggtccc ccgggtgctgtggggaggccaggagacagaggacccaaaggagaacgtggagatccgggt attcctggcgacagaggtccccagggtgaacgagggaagcctggcccatcaggagaaaag ggggatgtgggtcctgttggccctccaggagacagaggctatccaggatcaccaggtcat caaggtcccccaggctcaccaggacccccagggtttccagctgatgcaatttcacttgaa gaaataaaaaaatatatcaaacaagaggttcttaaggtatttgaagaaaggatgggtcaa tttgtatcccagctgaagctgcctgctgcaatgcttgcctcccaagctcatggaaaacca gggcccccaggaaaagatggatcaccagggccaccaggaaaggacggtttgccagggcca ccaggagaacgtggaattcaaggttatagaggacagaaaggggaaagaggcgagcctgga attggactgcctggtaaccctggaccacctggccctgcagctgctggcctgccaggccca ccaggagcatcaggctcaccgggaccgcaggggccgcctggagccagcgggaggtgcaac ccggcggattgctactcccacgtgtcacagactcactcacgcaccagcaataagttaatt taa

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