Geospiza fortis (medium ground-finch): 102040674
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Entry
102040674 CDS
T03755
Symbol
CTR9
Name
(RefSeq) CTR9 homolog, Paf1/RNA polymerase II complex component
KO
K15176
RNA polymerase-associated protein CTR9
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102040674 (CTR9)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102040674 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_12
TPR_17
TPR_10
TPR_6
TPR_11
TPR_7
TPR_9
ANAPC3
TPPII_C
Motif
Other DBs
NCBI-GeneID:
102040674
NCBI-ProteinID:
XP_014164717
LinkDB
All DBs
Position
Un
AA seq
1228 aa
AA seq
DB search
MHYTQLLLIPGIQETLLTPSIASWGSISVDTPIPRGRCATGVRRSRHHPHTALVPPSNRP
GAGPGPLRPVAEHVRVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGTGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKAEEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSEEGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSARASE
EESDSDRSPRKRRRSESEQSDNESVQSGRSRGSGGSENESRPASRSPESDRDSERGSDHE
GSARASGNESEPEASNDEGSEGGSDDSD
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgcactacacgcagttgcttttaattccaggaattcaagaaaccttgttgacacccagc
attgcctcctggggatccataagcgtagatacaccaattcctaggggcaggtgtgcaaca
ggggtcagaaggagcaggcaccaccctcacaccgcccttgtaccgccctcgaaccgcccc
ggggccgggcccggcccgctccgccccgttgccgagcacgtccgggttattgagcttgac
ttcgatcagttgcccgagggtgatgaagttataagtattctgaaacaggagcacacccag
ctgcacatatggattgccctagcgctggagtattacaagcaaggcaaaacagaagacttt
gtgaagctgctggaagctgcccgcatcgatggcaacctggactacagagaccacgagaag
gaccagatgacatgtctggacaccctggcagcctactatgtacagcaggctcggaaggag
aagaacaaagacaacaagaaggagctcatcacccaggccaccctgctgtacactatggct
gacaaaatcatcatgtatgatcagaatcacttgttgggaagagcctgcttttgcctgctt
gaaggtgataagatggaccaagctgatgcccagttccacttcgtgctcaaccagtctcca
aataatattcctgccctacttggtaaggcatgcatttctttcaacaagaaggattataga
ggagcccttgcctactacaagaaagcactgcgtaccaatccaggctgcccagccgaggtt
cggttgggaatgggtcactgctttgtgaagctgaacaagctggaaaaagctcgcctggcc
ttcagcagggctctggagctcaattccaagtgtgtcggggccttggttggactggctgtt
ctggagctcaataataaggaggctgattccatcaagaatggtgttcaactcctctctagg
gcttatacaattgatcccagcaatccaatggtgttgaatcacttggctaatcacttcttt
ttcaagaaggactatggtaaagtacaacacttagctcttcatgctttccataacacagaa
gtggaagcgatgcaggcagagagctgttaccagctggcaaggtcttttcatgtacaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcatcttctttt
gtacttccgttttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgct
tcacaatgctttgaaaaagtcttgaaagcctaccctaacaattatgaaactatgaaaatc
cttggatctctttatgcagcttcagaagaccaggagaaacgggatattgcaaaggggcat
ttaaagaaagtcacagaacaatatcctgatgatgtagaggcttggattgagctagcccaa
attctagaacagactgatatacagggtgctctgtcagcctatggcacagccacacgcatt
ctgcaggagaaagtacaggctgatgtccctccagagatcctgaataacgtgggtgccctg
cacttcaggctgggaaacctgggagaagcaaagaaatacttcctggcatcgctggatcgt
gcgaaagcagaggctgagcatgatgagcattactacaatgccatctctgtgacaacatcc
tacaaccttgccaggctctacgaggccatgtgtgaatttcatgaagctgaaaagctctat
aaaaacattctgagagaacatccaaattacgttgattgctacttgcgcttgggagctatg
gctagggataaagggaatttttatgaggcttctgattggtttaaagaagcacttcaaatc
aatcaggaccatccagatgcctggtctctgattggcaatcttcacttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatattgaagcagccctccacacaaaatgat
acttattccatgctggctcttggcaacgtctggttacagactctccatcaacccacaaga
gacagagaaaaggagaaacgtcaccaggaccgtgcattagccatctacaagcaagtcctc
agaaatgacccaaagaatttgtatgctgctaatggcataggagctgtcttggcacacaag
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggccacagcagatatc
agcgatgtgtggctgaatttggcacacatctacgtggagcagaagcagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcaccaaaacactgaagtgttg
ttatatttggcccgggcactgttcaaatgtggcaaattacaggaatgcaaacaaactttg
ttaaaggccaggcatgtggctccaagtgatacagtcctcatgtttaatgtggctttagtg
ctgcaaagacttgctacctctgtcctgaaagatgaaaaaagcaatctgaaggaagtcctt
aatgctgtgaaggagctggagctcgcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacttgctgctacagaagccaggcagtgctctgactta
ctgagccaggcccagtatcatgtggctcgggcacgcaagcaggatgaggaggagagggag
ctgcgtgccaagcaggagcaggagaaggagctgcttcgccagaaactgcttaaagaacag
gaagagaagcgcctgagagaaaaagaagagcagaagaagcttctggagcaaagagctcaa
tatgtggagaagaccaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggcggtggaggcaggcgttccaaaaaaggaacaggggagtttgatgag
tttgtcaatgatgacagtgatgaagatctgcccatctctagaaagaaaaagaagaggaag
ggcagtggcagtgaacaggatggggaagaagaggagggtgagagaaagaagaagaagagg
aggagaccccagaaggcagaagaggggagtgatgatgaagaacatgaaaatggcccacgg
cctaagaagcgacgtccacccaaagcagagaagaagaaggctcccaaaccagagcgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattct
tctgatgaggacaaactgaaaattgctgatgatgggcacgctagaaatagcaacagcgat
tctgaggagggggagcagcagcacagcaaacgcattgtttccgacagcgattcggataac
cggaacaagtcgggcagcgaggcaggcagtccccgcaggtccagcgcccgcgcctccgag
gaggagtctgacagtgaccggtccccgaggaagaggcggcgctcggagtcggagcagtcg
gacaatgagtccgtgcagtcggggaggagccgcggctccggcggctccgagaacgaatcg
cggccggcttcgcgcagccccgagtccgacagggactccgagaggggctctgaccacgag
gggtctgccagagcttctgggaacgagtctgagccagaggcatccaatgatgagggctct
gaagggggctcggatgacagcgattag
DBGET
integrated database retrieval system