Geospiza fortis (medium ground-finch): 102041509
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Entry
102041509 CDS
T03755
Symbol
NPHP1
Name
(RefSeq) nephrocystin 1
KO
K19657
nephrocystin-1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gfr03037
]
102041509 (NPHP1)
Cilium and associated proteins [BR:
gfr03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102041509 (NPHP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
SH3_10
Motif
Other DBs
NCBI-GeneID:
102041509
NCBI-ProteinID:
XP_014163152
LinkDB
All DBs
Position
Un
AA seq
656 aa
AA seq
DB search
MISEVEALRAESAAAAPGQREPLRLRCAELKELVEENTKALHALKKADEPAPVGNYSQRK
EEEEKLLLRLSQQLQKLLLVLDQDKVTKNYPGGEEHQKGPHAEEGNEEEEESEDKESEEE
DTEEEEDEEKLLDDPNVRECVAVGNFDAQQEGDLTFVKGEILLIHDKKEDGWWVAENSKG
ERGLVPRTYLAVGEEEEESQEESEEHVEVVDETADGTEIKKRTDSHWSAVRAIVENDTVE
VLTTTGAVPAGFRPSMLFQLLEEGEEFRASYYLQPKLTPSQLAFRDLVWNSERNTIHPRP
TRVSLIVTLCSCKMIPFPGSGVRVLSRHVRLCLFDGSRVLSNIHTVRATWLPKNPQTWTF
SPRVMGILPSLLDGDCFVRSNSLSSDIGILFELGITYKCNSTGERGELSCGWAFLKLFTS
SGIPVPSKMHELVLSGGTPYERGVEVDPSISRRAGSGVFQQFMSLRKQPVLLVKVKSPSV
HSKDILNFLPETLVGGMCYIHLLVFYRQILGDALLKDRTSMQSTDLICNPVLATFPQLLD
QPDLMDALRSAWAEKERTLKRIEKRDQEFLKSAFVLVYHDSVFPLLCSTFLPSYRWAEEE
VELSRWKVIHDFLKRSQEKDGALEYLLSSENTHRAFDISELAYDFLGEVRENNPGE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatctcggaggtggaggcgctgcgggcggagagcgcggccgcagcccccgggcagcga
gagccccttcggctgagatgtgcagagctgaaggaattggtggaggagaatacgaaggct
ctccatgctttgaaaaaagctgacgagcctgcgccggtggggaattacagccagaggaag
gaagaggaagaaaagctgttgctgagactctcccagcagctgcagaaactccttcttgtc
ttggatcaggataaggtgacaaagaattatccagggggtgaggaacaccagaaaggccct
catgcagaagagggaaacgaagaagaggaggagagtgaagataaagaaagtgaggaggaa
gacactgaagaagaagaagatgaggagaagttgttggatgatccaaatgttagagaatgt
gttgctgttgggaactttgatgcccagcaggaaggggatctcacatttgtgaaaggtgaa
atcctgctcatacatgacaagaaggaggatggctggtgggtagctgaaaattccaagggg
gagagaggcctcgttcccaggacctaccttgcggtgggtgaagaagaagaagaaagccag
gaggagtcagaagaacacgtagaagtggtggatgaaacagcagatggaactgaaattaaa
aaaagaacagattcccactggagtgctgtccgagccattgtagagaacgacactgtggag
gtgctgaccaccacaggggcagttcctgcagggttccgcccatccatgctgttccagctc
ctggaggaaggtgaagagtttcgagcaagttactatttgcaacccaagcttactccatcc
cagctggctttcagagacttggtgtggaactctgagagaaatactatccatcctagaccc
accagagtgtccctgattgtcactttatgcagctgcaagatgatccctttccctgggagc
ggtgtgcgcgttctcagccggcacgtccggctctgcctcttcgatggcagccgggtgctg
agtaacattcacacagtgagagccacgtggctgcctaaaaatcctcaaacttggaccttt
tctccaagggtgatgggcatcttacccagcttgcttgatggtgactgttttgtcaggtcc
aactccctgtcttcagacattgggatcttgtttgagcttggcatcacatacaagtgcaat
tcaacaggtgaaagaggagagctgagctgtggttgggcctttctgaagcttttcacttcc
agtgggattcctgttccttccaagatgcatgagctggtcctgagtggtggaactccctat
gagagaggcgttgaggttgacccatcaatatcgaggagagcaggctctggggtttttcag
cagtttatgagcctcaggaagcagcctgtgcttctggtgaaagtgaagtcaccgagtgtg
cactcgaaagacatcctgaattttctccctgaaacattagttgggggcatgtgctacatc
catctcctggtgttttatcggcaaatccttggagatgccctcctgaaggacaggacgagc
atgcaaagcacagacttaatctgtaatcctgtgctagcaactttccctcaactcctggat
cagccagacctgatggatgcacttcggagtgcctgggcagagaaagaaagaacattgaag
agaattgagaagagagatcaagaattcctgaagtctgcgtttgtcctggtgtaccacgac
tctgtgttccctctgctctgctccacgttcctccccagctacagatgggctgaggaggag
gtggaattgtctcgctggaaggtgatccatgacttcctgaagaggagccaggagaaggac
ggtgccctggagtacctgctgtcatcagaaaacacccacagagcctttgacatctcagag
ctggcctatgatttcttaggagaagtgagggaaaacaatcctggagaatga
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