Geospiza fortis (medium ground-finch): 102042671
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Entry
102042671 CDS
T03755
Name
(RefSeq) KIAA0586 ortholog
KO
K22865
protein TALPID3
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gfr03037
]
102042671
Cilium and associated proteins [BR:
gfr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102042671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TALPID3
EIF_2_alpha
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
102042671
NCBI-ProteinID:
XP_005418094
LinkDB
All DBs
Position
Un
AA seq
1407 aa
AA seq
DB search
MFLSQKDPPKEAAAQNGPLVLLENSRGPEDDVFISQYATGQKEALRAVLMQKTQVIPVHK
EVKVQLLGSAPTEKREGAGSDTRSAAREAESATTIAAATAAAIASTAPLLKVQNDLEAKV
NSVSELLQKLQETDRQLQRASEQQKNMKAQHEEPHYQQRVSELEKQMNSFMVQRIQHLEK
LQEQQMNIQSHLISSAVNTRGLQQGPVPAPGPLAGHWEKPEQRSLTNEAPSSHRGLFPAS
AAPAQGEGKGLEHVLNSQETPLKQIEYSKKTALNSNERSKHAERDRHKALPAGLIPSFER
YNSIEKTVQKADDLLQDLGKLRREMHNILQEASSWKTDMTDLIKTKSPPVPPDPPEDHPV
SKPSILQNVQVPRSILTDAERILRGVQNNKKVLEENLEAVTQAKDGDAVYAFSNSLTTNR
DVLEEIRIRRTVDDWIKAISEEIQAELARSDSEQGKCDQKAPWNKKAQNLRAVKTKKETK
EKTENIQGSLTKKLSPPAQPLQKQVEDNTKKQKFKTYFSENVQSKERKADGAVGGTAVVQ
NEDYLSQVYGKPIYHGRRSTLKKGPYLRFNNFPSPKSKLARPKLIETVRGTKVKSARTQT
CFHTQKLISSPKKKNPVFAPAQQSQYLFSPSQDVPADSGPLEGHLIPMAIPLGQTQSSNT
SVQPAGVVIDKPHPVTVTTSLPPVPPKPPVEVKKPNIAVIEMRSEKKEPPQLSVQVLPNV
DIDSVSSTRTVSPVPPSSEPLLPPVNAVIQTPEEIHSEEEDTKLPGANFIDVTDVTQDQE
EEKDEIPEFLEPVLELNGQFKVASPQHNSPLFPPVASAPQQPADILDELIQKRETIENKL
VNWVEQEIMAKIISEMCPAQTEAVPSTSSSIKSEDSEAVTPGTVEVAGGGGFQLFVNAGV
PVDSEMINNFVKEALSETIATMLGDSQAQRAVPDPLPPSTTSVMEAPVPTPVPTPQATPP
PTPPSEKELPQVKTPDSSPSPPEMSGDVHGHEKIKETGVEIAAAMGRVVTPVVTPVVTPV
TTPPPVATPSPPVSEWGSQAEKRESPKLPNPWDGAELPLEEENPSPVPEEPFCPETVEMS
VANDEEPEALVFPSQQLPGRPLEPLPCPAQVPSPVPTVSSGVSSQESSLTPTGTETTDRP
LSEGEVLFPYGQPLPAAEGGLSLPNLAESLSSTLRDANEMDYDPPSEGQVMRRMGKGCHR
DPVLALLTKLNQAPVYVQERIEHSEDSDGSIGELSEGQRPRLSRAQERILMGNSIFMEHP
AAQSFGNRPRQGLRSASPGQVVQIGEILGDADTSPSPMLLAELDSQPGSNPALPAAQPSC
RMTPLPEDLSQEESQGAAHVQAVRPRVIFVRRKSEEMQQEGDAAPHLNPHLSAAGVSVQL
PGTSTENETQSLSSARGDSDSSGTDTF
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgtttttatcccagaaggatcctcctaaagaagctgcagcacaaaatggtcctttggtg
cttctggaaaatagcagaggacctgaagatgatgtttttatttcccagtatgctactggc
cagaaggaggctctgagagcagtattaatgcaaaaaactcaggtcattcctgttcataag
gaggtgaaggtgcagctcttgggaagtgcccccacagaaaaaagggaaggtgctgggagt
gacaccaggtcagcagccagggaagctgagtctgcaacaaccattgcagcagccactgct
gctgccattgccagcacagctccacttctcaaggttcaaaatgatttggaagcaaaagtg
aactcagtttcagaactgcttcagaaactgcaggagacagacaggcagctgcaacgagcg
tctgaacagcaaaaaaatatgaaggctcagcatgaggagccccactaccagcagagagtc
agtgagcttgaaaaacaaatgaattctttcatggtgcaaaggattcaacacctggaaaag
ctacaggagcaacaaatgaatattcagtcccatctcatcagctctgcagtgaacacccgt
ggcctgcagcagggtcctgtgcctgcccctgggcccctggcagggcactgggagaagcca
gagcagagatcactcactaatgaagcaccttcatctcacaggggtttgttccctgccagt
gctgcacctgcccaaggtgaagggaaaggtctggaacacgttttgaattctcaggaaaca
ccactaaagcaaattgaatattccaagaagacagcattaaacagcaatgaaaggagcaag
catgctgagagagacagacacaaagctttgcctgcaggcttgattccctcctttgaaagg
tacaattcaattgagaaaactgtgcaaaaagcagatgatctacttcaagatcttggcaag
ttgagaagagaaatgcacaacattctgcaggaagcaagttcatggaaaactgacatgact
gatcttattaagacaaaaagtcctcctgttccgcctgatcctcctgaagatcatccagtc
agcaaaccatccatccttcaaaatgtccaagtgccaaggtctatcctgacagatgctgaa
aggattttgagaggagtgcagaacaataaaaaagtccttgaggagaatctggaagctgtt
actcaggcaaaagatggagatgccgtgtatgctttcagtaactccttgactacaaacaga
gatgtcctggaagagattcgtatccgaaggactgtggatgactggatcaaggcaatcagt
gaggaaatccaggctgaactggcaagaagtgattcagaacaagggaaatgtgatcaaaaa
gccccatggaacaagaaagcccaaaatctcagggctgtgaagaccaagaaagaaactaaa
gagaaaactgaaaacatccaaggaagcttgaccaaaaagctttcgcctccagctcagcca
ttgcagaagcaggtggaagataacacaaagaaacagaagtttaaaacttacttttctgaa
aatgtgcaaagcaaagaaagaaaggcagatggagctgtaggtggaactgcagtggtgcaa
aatgaagattatctgtctcaagtttatggcaaacccatttaccatgggcgccgcagcacg
cttaaaaaaggaccctacctgaggttcaacaactttccctctcccaaatctaaacttgcc
agacccaagctgatagagactgttagaggcacaaaggtgaaatcagcaaggacccagacc
tgctttcacacacagaagctcatcagcagccccaagaagaagaatcctgtgtttgcccct
gcccagcagagccagtacctcttcagccccagccaggatgtccctgctgactctggtccc
ctggaaggccacctcatccccatggctattcctctaggtcaaacccagagcagcaacaca
tcagtgcagcctgctggagtagtcatagataaaccacaccctgtcacagttacaacctct
cttcctccagtgccaccaaagcctcctgtagaggttaaaaaaccaaatatagctgtgata
gagatgagatcagagaaaaaggagcctcctcagctctctgtgcaggtgttaccaaatgtt
gatattgacagtgtttcaagtaccaggactgtaagtcctgttcctccaagctctgagcct
ctgctccctcctgtcaatgctgtaatacagactccagaagaaatacacagtgaggaggaa
gacacaaagcttccaggagctaacttcattgatgttactgatgtcacacaggatcaggaa
gaggagaaggatgaaattccagaattccttgagcctgttctggagcttaatggccagttt
aaagttgcctcaccacagcacaatagtcctttgtttcctcctgtggcttctgctcctcag
cagcctgctgatattttggatgaactgattcaaaagagagaaactatagaaaacaagttg
gtcaattgggtggaacaagaaataatggcaaaaattatcagtgagatgtgcccagctcag
acagaagcagtgcccagcactagcagctccataaagagtgaagacagtgaggctgtgacc
cctggcactgttgaagttgcaggtggtggaggattccagctctttgtcaatgctggtgtt
cctgtggactcagaaatgataaataattttgtaaaggaagctctcagtgaaaccattgca
accatgctgggtgacagccaggctcagagagcagttcctgatcctcttcctcccagcacc
acctcagtgatggaggctcctgtgcctactccagtgccaacaccccaggccacaccacca
ccaacaccaccttcagaaaaagaattgcctcaggtcaaaactccagattcatctccatct
cctccagagatgagtggggatgttcatggacatgaaaaaattaaagaaacaggagttgag
attgcagctgccatgggccgtgttgtcacccctgtggtcactcctgtggtcacccctgtc
accacacctcccccagtagccacaccaagccctcctgtctcagaatggggctcccaggct
gaaaaaagggaaagtccaaagcttccaaacccgtgggatggtgcagaacttcctctggaa
gaagagaaccccagtcctgtccctgaagaaccattctgtcctgagactgtggagatgtca
gtggccaatgatgaggaaccagaggccttggttttcccatcccagcagctgccggggagg
cccttggagcccctgccctgccctgcccaggtgccatcccctgtgcccacagtgagctct
ggggtgtccagccaggagagcagcctcactcccacagggactgagaccacagacagaccc
ctctcagaaggggaggtgctcttcccctatgggcagcccctgcctgcagcagaaggagga
ttatctcttccaaacctggctgagagcttatccagtactctccgagatgccaatgaaatg
gattatgatcctccaagtgaagggcaggtgatgaggagaatgggtaaaggctgtcacagg
gatcctgtcctggctcttttaaccaaattaaatcaagcacctgtttatgtacaagaaaga
atagagcactcagaggattctgatggcagcattggggagctcagtgaaggacagaggcca
aggctgtccagagcacaggagagaatcctgatgggaaattccatttttatggagcatcca
gctgcccagagctttgggaacagaccacgccagggtctccgttctgcatctccagggcag
gttgtccaaattggagaaattcttggagatgcagatacaagtcctagtccaatgcttttg
gctgaactggactcacagccaggttcaaatcctgctctgccagcagcccagccaagctgc
agaatgacaccactcccagaggatctgtcccaggaggaaagccaaggagctgcacacgtt
caggctgtgagacccagagttatctttgtgagaaggaaatctgaggagatgcaacaagaa
ggagatgctgcccctcatctgaatccacatctttctgcagcaggggtgtcagtgcagctg
cctggcacgagcacagagaatgaaacacagagtctgagcagtgcacgtggagattcagat
tcttcagggacagacacattttaa
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