Geospiza fortis (medium ground-finch): 102042702
Help
Entry
102042702 CDS
T03755
Symbol
SAFB
Name
(RefSeq) scaffold attachment factor B1
KO
K25092
scaffold attachment factor B
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102042702 (SAFB)
Spliceosome [BR:
gfr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102042702 (SAFB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
102042702
NCBI-ProteinID:
XP_005428583
LinkDB
All DBs
Position
Un
AA seq
855 aa
AA seq
DB search
MASACPSPPDPGVRASFPALLSRCPDTHTRASSPYPISSFSVPFAESAIEEEGGDPDEIP
VASELTTKRMPKRTSKGRKPEEEGVEDNGLEENSRDGQEDIEANLDTLQDIDMMDISVLD
EAEIDNSSAVDCGEDYSPDNILDSLSDNKDNVEAEMKELPDQLTENEEDYDEIENNLEVS
SSDLIEMKKMEKLHLEPENEKILDILGETCKSELLNEEPPEAERPRAQEASNAGPGKRLA
PEEEAPDSEGVVVETLSDQSSKRSQGLEASSGETAEKGAGAEARDSKEDGKRAEDKANSE
ESSPATKESSASEGGDQKKSPVEEDRDTKIISKDEKGRSASSSGRNFWVSGLASTTRATD
LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCITHLHKTELHGKIISVEK
AKNEPAGKKTSEKKESEAKRETVSERPGGAKRDEKSDQKDDPKKTEDKDEKEKKDKDDQK
SGSSDQSKTIKSGSKGTERTVVMDKSKGEPVISVKTSTTSKDRSVKSQDRKSESRERQGI
VPFDKIKAQRKMREAEQRRTRERRERQQHLQTIREREERERLEIARERLEIERQRLERER
MERERLERERMHIEHERRREQDRIQREREELRRQHEQLRYEQERRSAMRRPYDIDGRRDD
PYWPEAKRMAMNDRYHSDFSRQDRFHDFDHRDRGRYQEHSIDRRDGSRTIMGDRDGQHYP
DERHGGPDRHSRDSRESWGSYGSDRRMSESRGIPPQSRDGRDWGDHSRKFEGHQDRSWQS
SVDGGMIGRDHERWQGGGRGRPGHVMHRGGMSGRGSFMQGGNQSQIMHGGGMQGEGFAGQ
ERANRPNDPRFNRRY
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcctgcccgtcaccgcctgaccccggtgtccgcgcgtccttccccgcttta
ctctcccgttgccccgacacacacacacgggcctcttccccgtacccgatctcctctttc
tctgtgccgtttgcagaatcggccattgaggaggaaggaggagatcctgatgaaattcct
gtggcctcagagctgaccacaaagagaatgccaaaaagaactagcaaaggaagaaagcca
gaagaagaaggtgtggaagacaatggtctagaagaaaactctagagatgggcaggaggat
attgaagcaaatctggacaccttgcaggatattgacatgatggatattagtgtgttagat
gaagctgaaatagataacagcagtgctgtagactgtggggaagattacagtcctgacaat
attcttgattctctgtctgataacaaagataatgtcgaagcagaaatgaaagagcttcct
gatcagctaacagaaaatgaggaagattatgatgaaattgaaaacaatttagaagtctcg
tcttcagatttaattgaaatgaagaaaatggagaagctacacttggagccagaaaatgag
aaaatactcgacattttgggggaaacttgtaaatctgagctacttaacgaagaacctccc
gaagcggagcggccgcgtgcgcaggaagccagtaacgcggggccaggcaagaggctggcc
cccgaggaagaggccccggactctgaaggtgtagtggtagagaccctaagcgatcagagt
agcaaacgctcccaaggcctggaagcctctagtggggagacagcggagaaaggcgcaggt
gccgaagccagagatagcaaagaagatggcaagagagcagaagacaaagctaattctgag
gaatcttcccctgccactaaagagtcctcagccagtgagggcggtgatcagaaaaagagc
cctgttgaggaggacagagatacaaagataatctcaaaggatgagaaaggtcgcagtgct
agcagttctggtagaaacttctgggtgagtggattggcttccaccaccagagctacagat
ctgaagaatctgtttagcaaatatgggaaggtggtgggggccaaggtggtgaccaacgct
cgcagtcccggcgctcgctgctacggctttgtcaccatgtccacagctgaggaggccacc
aagtgcatcacccacctgcacaagacagagctgcatggcaagatcatttctgtggaaaaa
gcaaaaaatgaacccgctgggaagaagacaagtgaaaaaaaagagagtgaagcaaagaga
gaaacagtcagtgagagacctggtggtgctaaaagggatgagaaatctgaccaaaaagat
gatcctaaaaagacagaagataaagatgaaaaggaaaaaaaagataaagatgaccagaag
tctggttcatcagatcagtctaagactattaaatcaggaagtaaaggaacagagagaaca
gtagtcatggataaatccaaaggagaacctgttattagtgtgaaaacatccactacatca
aaggacagaagtgttaagagccaggaccgcaaatcagagagcagagagagacaagggatt
gtcccctttgacaaaattaaagcacagaggaaaatgagggaggcagagcagcgccgcacc
cgcgagcgccgggagcggcagcagcacctccagaccatccgcgagcgggaggagagagag
aggctggagattgctcgggagaggctggaaatcgaaaggcagcgcctggaacgggaacgg
atggagagggagaggctggagagggaaaggatgcacatcgagcacgagaggaggagggag
caggaccggatccagcgcgagagggaggagctgcggcgccagcacgagcagctgcgctac
gagcaggagcggagatctgccatgaggagaccctatgacatagatggcaggagggatgat
ccatactggccagaagcaaaacgaatggccatgaatgacaggtaccactcagacttcagt
cgccaggatcgcttccatgacttcgatcacagggatcgtgggcgttaccaggagcattca
atagacaggagagatggatccagaacaattatgggagatcgggatggacaacactaccca
gacgagcgccacggaggccccgaccggcactcgcgggactcgcgggagagctggggcagc
tacggctccgacaggaggatgagtgagagcagagggatccccccacagtcacgggatgga
cgtgactggggagatcacagtcggaagtttgaagggcaccaagatcgttcctggcagagc
agcgtggatggagggatgataggacgggatcatgagagatggcaaggtggcggtagaggc
agacctggccatgtcatgcatcgtggaggcatgtcagggcgtggcagtttcatgcagggt
ggcaatcagagtcagatcatgcacggaggaggaatgcaaggagaaggatttgctggccag
gaaagggcaaacagaccgaacgatcctcgtttcaaccgtcgctactga
DBGET
integrated database retrieval system