Geospiza fortis (medium ground-finch): 102042909
Help
Entry
102042909 CDS
T03755
Symbol
U2SURP
Name
(RefSeq) U2 snRNP associated SURP domain containing
KO
K12842
U2-associated protein SR140
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102042909 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102042909 (U2SURP)
Spliceosome [BR:
gfr03041
]
Complex A
U2 snRNP components
U2 related factors
102042909 (U2SURP)
Complex B
102042909 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
102042909
NCBI-ProteinID:
XP_005424740
LinkDB
All DBs
Position
Un
AA seq
958 aa
AA seq
DB search
MIKEKPLMESKLKAFSIGKMSAAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGGDG
NKVKTFVRGGIVNASKEEHETDEKRGKIYKPSSRFSDQKNQPSQPSNEKPPSLLMIETKK
PPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPS
RRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPR
TDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSM
MEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLA
LIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDAPTKW
RTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPNKKGALKEEQRDKLEEILRGL
TPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKV
ANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLI
KLQNIFLGLVNIMEDKETEEVPDDLDGAPIEEELDGAPLEDVDGIPIDAAPIDDLDGVPI
KSLDDDLDGVPLDTAEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESE
EEEIQNQEEESEDEEDTQSSKSEEQHMYSNPIKEEMPDSKSSVKYSEMSEEKRAKLREIE
LKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKEMERERDRDKKDKEKSETR
SKDKKEKEECTPTRKERKRRHSASPSPSRSSGRPPAHSPSPKSERSERSHKESSRSRSSH
KDSPRDVSKKGKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggaaaagcctctaatggaaagtaaacttaaagcattcagtattggcaaaatg
agtgctgccaaacggacactgagtaagaaggagcaagaagaattaaaaaagaaggaggat
gagaaggctgctgcagaaatttatgaagagttccttgctgcctttgaaggaggtgatggt
aataaagtgaaaacatttgtaagaggaggaatcgttaatgcatctaaagaggagcatgaa
acagatgaaaaaaggggtaaaatctataaaccttcgtcacgattctcagatcaaaaaaat
caaccaagtcagccatctaatgagaaacctccatccctcctaatgatagaaaccaaaaag
cctcctttgaagaaaggagagaaggaaaagaaaaagagtaatttggaactttttaaagaa
gaattaaagcaaatccaagaggagcgtgatgaaaggcacaaaacaaaaggtagattgagt
cgttttgaaccaccccagtctgattcagatgggcagcggcgttcaatggatgctccttca
agaaggaacagatcgtctggtgtactggatgattatgcaccagggtcacatgatgttgga
gatccaagcacaacaaatttgtatctgggaaacatcaatcctcagatgaatgaagagatg
ttatgtcaagaatttggccgctttggaccattagcgagtgttaaaattatgtggccaaga
actgatgaagaaagagccagagaaagaaattgtggctttgttgcctttatgaacagaaga
gatgctgaaagagcattgaagaatttaaatggcaagatgataatgtcgtttgaaatgaag
ctgggctggggcaaagctgttcctatcccaccacatcccatctacattccgccctccatg
atggagcacaccctgccgccgcccccgtcaggactgcctttcaatgcccagcctagggag
aggttgaagaatcccaatgctccaatgttaccaccaccaaaaaacaaggaggattttgag
aagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaatttgctcgct
ttgatacatcgaatgatagagtttgtggttcgggaagggcccatgttcgaagccatgatc
atgaaccgagaaatcaacaacccaatgttcaggtttttatttgaaaaccagactccagcc
catgtgtattatagatggaagctttattcaattcttcagggggatgctccaaccaagtgg
aggacagaagatttccgtatgttcaaaaatggatccttctggaggccaccaccattgaat
ccatacttgcatgggatgtcagaagagcaagaaacagaagcgtttgtggaggaaccgaac
aagaagggtgcactcaaggaagaacagagggacaaactagaggaaatcctacgtggatta
acacctcggaagaatgacattggtgatgctatggtcttctgtctaaataatgcagaagct
gccgaagaaattgtggactgcattacagagtcattgtccatcctcaagactcctcttcct
aagaagatcgcaagattgtatctagtgtcggatgtgttatacaactcttcagctaaagtt
gccaatgcttcctactatagaaaattttttgaaacaaaattatgtcagatattctctgat
ctcaatgctacttaccgtacaatacaaggccatttacagtctgaaaatttcaagcaacgg
gtgatgacatgcttccgagcatgggaagactgggcaatctatccagagccatttctgatc
aaactacagaatattttcttgggacttgtaaatatcatggaagataaagaaacagaggaa
gtaccagatgatcttgatggtgctcccattgaggaagagctcgatggtgctccactagaa
gatgtggatggaattcctattgatgctgctcctattgatgatctggatggagtcccaatt
aaatctctggatgatgatcttgatggagttcctttggatacagctgaagactcaaaaaag
aatgagcctatatttaaagttgccccttcaaagtgggaagcagtggatgaatcggaactg
gaagctcaagctgttactacttctaagtgggagctttttgaccaacatgaagaatctgag
gaggaggaaattcaaaatcaagaagaagaaagtgaagatgaagaagacacacagagttct
aagtcagaagaacaacacatgtattccaaccctattaaagaggaaatgcctgactctaag
tcatcagtcaaatactcagaaatgagtgaagaaaagcgtgccaaactccgagagatagag
cttaaggtgatgaagtttcaggatgagttagagtctgggaaaagacccaagaagccaggc
cagagttttcaggaacaggttgaacactatagagacaagctgcttcagagggaaaaagaa
aaagagatggaaagagaacgggacagagacaaaaaggacaaggaaaagtctgagaccagg
tccaaagataagaaggaaaaagaggaatgtacaccaacacgaaaagagaggaagaggcgg
cacagcgcctcccccagcccgtcccgcagcagcggcaggccgcccgcccactccccctcg
cccaaatcggagcgctccgagcgctcccacaaggagagctcccgctcccgctcctcgcac
aaagattctcccagagatgtcagtaaaaaaggcaaaaggtcgccatctggctccaggaca
cccaaaagatcgagaagatcacgatccagatcccctaaaaagtcagggaaaaaatccagg
tctcagtcccgttctcctcacagatctcacaagaagtcaaagaaaagcaaacactga
DBGET
integrated database retrieval system
