Geospiza fortis (medium ground-finch): 102042984
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Entry
102042984 CDS
T03755
Symbol
ARHGEF5
Name
(RefSeq) Rho guanine nucleotide exchange factor 5
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102042984 (ARHGEF5)
Membrane trafficking [BR:
gfr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102042984 (ARHGEF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_2
SH3_1
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
102042984
NCBI-ProteinID:
XP_014164877
LinkDB
All DBs
Position
Un
AA seq
1734 aa
AA seq
DB search
MVEDREIKVVNQILLSFSQTSITGEAWDSSAVEEEYHATHIAAKMSTSPSNSAKGPELST
PKDCLAAPGKAAEMLGRPSNSMQKAPAGLDQGQRDTEPQKGLSELEEEMLLEEGGLDYSL
KLRQLELVDLESNQGPSSHSRVQDEAAPGSPVLQAVKLSTEFPQCQAELAFHGSDPQAQE
TKSPLANAISSQRETPKCFLVCKTVSEGHYKAEPFLGNILKDSLQELDAGAEQEQSTKKL
APASDEQPTSEGAVEDTAKPYTSEDVQESLRAPQSLEKNTDSSSSHQLTSTLTCDSQMSS
LQAEGNNSSGETGSTMMVKDQGMVLKKNSSASKCLHLEDHHRKTEGRSAPAAKNAFQGKS
TSKRTEEVNASWHKEPAWEEAVSELQQEEEEEECKEQNLLEEGKPLELKDQKNKEQNEQE
QLPREELRLGEELKLELLSSAFGSQIPSVPRHNMDVCGLEYASLSEQTGPVFLPGERVSV
DRHPSEDVLLKSHVTEAGSGCQLPAVGPLSSNNQNPGGETPHMCQVSDQAEDLEDSGRFS
IGGQDIGEAHWDDKTRLGRENEHSDDHGKAVQRFDKRDASLCGGVTAPFSAENPEALVPA
HLSSGTSNLEPPDHIDLHPVTGKAELWDFIPASPSEITSAVSASVPEQDGGRIASVTSEH
CPGTSLNKLPDPAGKPPKQAAPAQEWNPTPAETAVVRTGAREAKTSYEIPISEESFPEDL
SGPSSFSVMYMSSLPLQGGFPGDRRSVASIAGPLEVSQTPGRTSTPLNHPETIQQISPQK
SALIQGKERAADVDCKAQVPLFDEPDCSLYQKEPGSRISSVLSTLTWPSKDDMVLAVNQQ
GPLSPVSHSSLPLVSESDPKQLPHPPSHVQRPSQAQAAALHANHLVSPPAPEGHQLLAPG
LHFRPPLSCGMDDGKLGAIHPAPSCPLRSATSAFDTNSVASASDGESLAERDDLVPVSRE
WDLGDSGPHDTETSDDSGVSLLTKSFLALGNEMLVGCSDTSPEIADHNMDIESGKSSPDQ
PSWPSLEGLITSPDSKSRESPPLLPMLAFTNPIHFLRLSPPSLLTTRTTCQDKELRWEQP
TGSFSGDTKNIQAPLAVTEKTEGERRVRQRLEGGEHQPKQEKAKHAPLEKSSSWPDKKNI
GVAMQDPAGNQENPIKSRVKTKDWHRQGLKRMSVPPDILQQVSSVPAEEEAHKAHREPPV
SSETVIMREKKSADTTENFKRRHSKLINSSRLLYQEYSDVALNKAIQSQKRVDYPEDIES
SFPSSPRLRRKVLSPQDSYLQRLSVSSNASLWQDIPMIRGSRILLNMSREEQRLQEAKFE
LIISEASYLRSLNVAVDHFQRSAELQAMLTNQERQWLFSRLSDVRDVSASFLFDLEEKFE
EDMFTFHVCDVALKHAPDFRRVYLPYVTNQTYQEQTFQRLLNGNAGFQQVLERLESDPVC
QRLSLKSFLILPFQRITRLKLLLQNILKRTRPGSEEEVQATQAYDALEKLIKDCNENVQR
MKSTEELIYLSQKIEFECKIFPLISQSRRLVKCGELTALDFNNLSPKWKVTTRPIYLHLF
NDCLLLSRPKEGGRFVVFDHAAFSYVRGEKCEMKLHGANKNLFRLFLLQNNQGKRVEFLF
RTETHSEKLRWISALAPPRGELDLLECPDAPQVQCIKTYKARENDELALEKADIIMVMQY
SNDGWIEGVKLSDRERGWFPSEHVENISSKHVRQKNLKEEQRVKNAKQQVFCKK
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagacagagagataaaagtggtgaatcagattcttctgtccttttcacagacc
agcatcactggggaagcctgggattcttcagccgtggaagaagagtatcatgccactcat
atagcagccaaaatgagcacgagcccatctaactctgcaaagggaccagagctcagcaca
cccaaggactgccttgctgctccagggaaagcagcagagatgctgggcagaccctctaac
tctatgcaaaaagcaccagcaggactggaccaaggccaaagggatacagagcctcaaaag
ggactctcagaactggaagaagaaatgcttttagaggagggtggactggattattctctg
aaacttaggcaattggaactggttgacctggaaagcaaccagggcccttcctctcacagc
agagtccaggatgaggcagcccctggcagcccagtcctgcaggctgtgaagctcagcact
gagtttcctcagtgccaagcagaactggcttttcatggctcagaccctcaggcccaggaa
acgaaatcccctttggctaatgccatttcctctcagagggagacacctaagtgctttttg
gtgtgtaaaactgtttcagaaggacattataaggctgagccctttctgggtaacatcttg
aaggactctttgcaggagcttgatgctggtgcagagcaggagcaaagcaccaaaaagttg
gcaccagcatctgatgagcagcctacctcagagggagcagtagaagacacagctaaacct
tacacttctgaagatgttcaggaaagcttaagagcaccccaaagtttggaaaagaataca
gattcttcctcttcccatcagttaacttccaccttaacatgtgacagccaaatgagttca
ctacaagcagaaggaaacaactcatctggtgaaacagggagtaccatgatggtcaaagac
cagggaatggttcttaaaaaaaactcatctgcttccaaatgccttcatctagaagatcat
cacagaaaaactgagggcaggtctgcccctgcagcaaaaaatgctttccaaggaaaaagt
acttctaaaaggacagaggaagtgaatgcttcatggcataaggagccagcttgggaggag
gcagtgtctgaacttcagcaagaagaggaggaggaagaatgcaaagagcagaatttgctg
gaagaaggcaaacctttggaactcaaagatcagaagaacaaggaacaaaatgagcaggaa
caactgccaagagaagagcttagactgggggaagagctgaaactagagcttttatcatca
gcttttgggtcacagataccttctgttcccaggcataacatggatgtatgtggtttggag
tatgcttccttgtctgagcaaacaggaccagtatttcttcctggggaacgtgtctctgtg
gatcggcatcctagtgaggacgtgctgctgaaatctcatgtcacagaagcaggttctgga
tgtcagctacctgctgtcggccctctgtcctcaaataaccagaacccagggggggaaact
ccacatatgtgccaggtttctgaccaagcagaagacctggaggactctggccgcttttcc
atcggtggtcaggatattggagaagctcactgggatgataagacacgactgggcagggag
aatgagcacagtgatgatcatggaaaagctgtccagaggtttgataaaagagatgcatca
ctctgtggaggggtgacagcaccttttagtgcagagaacccagaggctcttgttccagca
cacctttcctctggtaccagtaacttggagccacctgatcacatagatcttcatcctgta
acaggaaaagctgagctttgggacttcattccagcttccccctcagagatcacctcagca
gtgtcagcatctgttccagagcaggatggtggcagaatagcctctgtgacctctgagcac
tgtcctggcaccagcctgaacaagctgccagaccctgcagggaaaccacccaaacaagct
gctcctgcacaagagtggaacccaacaccagcagaaactgctgttgtaaggacaggtgca
agggaggccaagacttcctatgaaatccctatttctgaggaaagctttcctgaggacctt
agtggcccatcttctttctctgtaatgtacatgagctcccttcctctacaagggggcttt
cctggagataggaggtctgtggctagtattgcaggacctctggaagtatcccaaacacca
ggaaggacttccactcccctgaaccacccagagacaattcagcaaatctctccccaaaaa
agtgcccttatacaaggaaaagaaagggcagcagatgtggattgtaaagcacaagtgcct
ttatttgatgagcctgactgcagtttataccaaaaagagcctggatccagaatttccagt
gtcctgagcaccctaacttggccctccaaagatgatatggtccttgctgtgaaccagcaa
ggacctctgtcccctgtgtcccactcaagcctacctctggtgtctgagtctgatcccaaa
cagcttcctcatcctccttcccatgtccaaaggcccagtcaagctcaggccgctgcactc
cacgcaaatcaccttgtttcacctccagcccctgaaggtcaccagctgttggctcctgga
ctgcacttcaggccccccctcagctgtgggatggatgatggtaagctgggagccattcac
cctgctccaagctgtcctctccggtctgccacctctgcatttgataccaactccgtggcc
tctgcttctgatggagaaagtctagcagagagagatgaccttgttccagtgagtagagag
tgggatcttggtgactcaggtccccatgatacagagacttctgatgactcaggggtcagt
ttgctgaccaaaagttttttggctcttggaaacgaaatgttggttggctgctctgacacc
agccctgaaatagcagatcacaacatggatatagagagtggaaaatcctcacctgaccag
ccttcttggccctcgttggaaggcttgataacatccccagactccaaaagcagagagtct
ccaccgctccttccaatgcttgcattcaccaatcctattcacttcctccggctcagccct
ccatcactgctgaccaccagaacaacctgccaggacaaggagctacgatgggagcagccc
acaggtagcttcagtggggacacaaagaacatccaggctccactggcagtcacagagaaa
acagaaggtgagaggagagtcaggcaaaggctggaaggaggagagcaccagccaaagcaa
gaaaaggccaaacatgcacccttggaaaaatcatcaagttggccagacaaaaaaaacatt
ggggtagctatgcaggacccagcaggcaatcaagaaaacccaattaaaagccgagtaaaa
acaaaggactggcaccgtcagggcctgaagaggatgtcagtaccaccagacatcttgcag
caggtttcttctgttcctgcagaggaggaagctcacaaggcacacagggaaccaccagtc
agctcagaaacagttataatgcgagagaagaaatctgcagacacaacagagaacttcaag
cgccggcactccaaactgatcaactcctcaagattactgtatcaggagtacagtgatgtg
gctctgaacaaggccatccaaagccagaagagagtggattatccagaggatatagagtca
agtttcccaagttccccgaggctacggaggaaagtgctgtctccccaggactcatatttg
caacgtctatcagtctcatctaatgcatccctctggcaggacatccccatgatacggggc
agcagaatactgcttaacatgtcccgtgaggaacagaggctgcaagaggccaagtttgag
ctgataatatctgaggcttcctacctgcgcagtttgaatgtggcagtggatcacttccag
cgctcagcagagctccaggcaatgctcaccaaccaggagcgccagtggctcttctcccgc
ctctccgatgtgcgtgatgtcagtgccagtttcctctttgacttggaggaaaaatttgaa
gaggacatgttcaccttccatgtatgcgacgtggctctgaagcatgcccccgacttccgc
cgggtgtatctgccatatgtgacaaaccagacatatcaggagcaaacgttccagagatta
ctaaatggaaatgcagggttccagcaagtcctggagagactggaaagtgatccagtgtgc
cagcgcctctcacttaaatccttcctcatcctccccttccagcgcatcactcgactcaaa
ctcctcctacagaatatcctgaaaagaactcggcctgggtctgaggaggaagtgcaagca
acacaggcctatgatgcacttgaaaagcttatcaaggattgcaatgagaatgtccagcgc
atgaagagcactgaagagctgatctacctcagccagaagattgaatttgagtgtaagata
ttcccactcatctcacagtcaaggcgacttgtgaaatgtggtgagttgacagcactggac
ttcaacaacctgagtccaaaatggaaagtcacgacccggcccatctacctgcaccttttc
aatgactgtctgctcctgtctcggcccaaggagggtggacgttttgttgtgtttgaccat
gctgctttctcgtacgtgcgtggggagaagtgcgagatgaaactccacggggcaaacaag
aatctgttccgtctctttctgcttcagaataaccaggggaaaagagtggagttcttgttt
cggacagagacacacagtgagaagctgaggtggatctctgctttggctcctccgcgggga
gaactggacctcctggaatgccctgatgcaccacaagttcagtgcataaagacttacaag
gctcgggaaaatgatgagctggctttggagaaggcagatatcatcatggttatgcagtac
agcaatgatgggtggatagaaggagtaaaactctcagaccgggagagaggctggttcccc
tcagaacacgtggaaaacatctccagcaaacacgtgcggcagaagaacctgaaggaggag
caacgggtgaagaatgccaagcagcaggtcttctgcaagaaataa
DBGET
integrated database retrieval system
