Geospiza fortis (medium ground-finch): 102043048
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Entry
102043048 CDS
T03755
Symbol
DIEXF
Name
(RefSeq) digestive organ expansion factor homolog (zebrafish)
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102043048 (DIEXF)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102043048 (DIEXF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25
DEAD
Motif
Other DBs
NCBI-GeneID:
102043048
NCBI-ProteinID:
XP_005416237
LinkDB
All DBs
Position
Un
AA seq
767 aa
AA seq
DB search
GGRELLRSLSKKQKKHLREFGEEHPFYDKVSGRPEETQICELSDDSDKSSKESDSETEVE
QVSGYHKLLATLKTSPESESEEEEDESESEEAEESEAEMDSEGSQETGEAEEGKEETNDV
PEEEEDVVSTDTAEQMLSQEQADGTDTPCDPRHGVIEEFTDVKHESEFSLETNFMEEESG
DCNADRRDSSSSQALPEDPFKQHMDKELEEKEIEKISALPKTSSPSQWPRLGQVVFSSPL
EKQKTFKADKEVDVTQLHLHKPLESTWPKVNKQFLSAADKPTDSSFTPLQRELFCIMNSY
RDLFYPERNALTNGEEIRHAYCLHALNHVLKANAQVLSNNARRRDRKPGTDTDDHRDQGL
TRPKVLMIVPFRECALRIVHVFISLLEVNDKKKIDVSNKKRFKGEYGSDPEEKPPNLKRP
EDYEAVFAGNIDDHFRIGVAILQKSMRLYAPFYSSDIIIASPLGIRTVIGAEGEKKRDFD
FLSSIEILIIDQADIYLMQNWEHVLHLMKHINLLPLDSHGVDFSRVRMLNLNNWSKYYRQ
TLLFSALQDPQINSVFNKHCFNYMGQVAIRNVPLTGSISHVVVQLPHVFRRLEADSVTSV
IDGRFQFFIDKVLPEYRDAIMSHTLIYVPSYFDYVRLRNYFKKEDLNFTHICEYTKKAAV
CRARRFFLKGEKQFLLFTERFHFYKRYTIKGIRNLIFYELPTYSHFYSEICNMLKATDSG
VDATWTCTVLYSKYDAQKLAAVVGIDRTAQMLQSKKNVHLFVTGEND
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ggcgggcgggagttgctgcgcagcctgagcaagaagcagaagaagcacctgcgggagttc
ggcgaggagcacccgttctacgacaaggtttctggaagaccagaagaaactcaaatatgt
gaactgtctgatgattctgataaatcaagtaaagaaagtgactcagagactgaagtggaa
caggtctctggatatcataagctcctggctaccctgaagacctcgcctgagtctgagagt
gaggaagaggaagatgaaagtgaatccgaagaagctgaggaaagtgaggcagaaatggac
agtgaagggtcccaggagactggagaagcagaggaaggcaaagaagagacaaatgacgtt
ccagaggaggaagaagatgttgtttccacagacacagcagagcagatgctcagccaggag
caggctgatggcacagataccccttgtgacccacgtcatggagtaattgaggagtttact
gatgtgaaacatgaatctgaatttagcttggaaaccaatttcatggaagaggagagtgga
gattgcaatgcagataggagagacagcagttcttcacaagctcttccagaagatccattt
aagcagcacatggacaaagaacttgaagaaaaggaaatagagaaaatatctgcacttcct
aaaacttcaagtccaagtcagtggccaaggctgggtcaagtagttttttcttcccctttg
gagaaacagaaaactttcaaagcagacaaagaagttgatgtcacacagcttcatctccac
aagcctttggaatccacttggccaaaagtgaataaacagtttctgtctgcagcggacaaa
ccaactgattcctcttttaccccattacaaagagagctgttctgtatcatgaattcctac
cgggacttgttctacccggagagaaacgctctaacaaatggagaggagatccggcacgct
tactgcctgcacgccctgaaccacgtgctcaaggccaacgcccaggtgctcagcaacaac
gccagacggagggaccgaaagccaggcactgacaccgatgatcaccgggaccaggggctc
accaggcctaaggtgctgatgatagtgcccttcagggagtgtgctctgcgcattgtgcat
gttttcatcagtctcctcgaagtgaatgacaagaaaaaaatagatgtgagtaacaaaaag
cgcttcaaaggggagtatggctctgacccagaagagaagccccccaatctgaaaagacct
gaagattatgaagctgtctttgctggcaacattgatgaccacttcagaattggtgttgca
atcctgcagaagagcatgagactctatgcacccttctactcctcagacatcatcattgcc
tctcccctgggcatcaggactgtcattggtgcagagggggagaagaaaagagactttgat
tttctgtcatcaatagaaatcctcattattgatcaagcagacatttacctgatgcagaac
tgggaacatgtcctgcacctgatgaagcacattaacctgctgcctctggactcccacggc
gtggacttttcccgagtgcggatgctgaatctcaacaactggtccaagtactaccggcag
acgctgctgttcagtgccctccaggacccccagatcaactctgtcttcaacaaacactgc
ttcaattacatggggcaggtggccatccgcaacgtgccgctcactggctccatcagccac
gttgtggtccagcttcctcatgtttttcggagattagaagctgacagtgtaacttctgtg
atagatggcaggtttcagtttttcattgacaaagttctgcccgagtaccgcgacgccatc
atgtcccacacgctcatctacgtcccctcctacttcgactacgtgcgccttcgcaactat
ttcaagaaagaggacctgaacttcactcacatctgtgaatacaccaaaaaggctgctgtc
tgcagggcaaggcgcttcttcctcaagggagagaagcagttcttactgttcactgagcgt
ttccacttctacaaaaggtatacgataaaaggcattaggaacctcattttctacgagttg
ccaacatactcccacttctacagtgagatttgcaacatgctgaaggccacagacagtggg
gtggatgccacttggacttgtactgtgctctactccaagtatgatgctcagaagttggct
gcagtggttggcatagaccgcactgctcaaatgctacagtccaagaagaatgtgcacctc
tttgttacaggagaaaatgattga
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