Geospiza fortis (medium ground-finch): 102043473
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Entry
102043473 CDS
T03755
Symbol
RORB
Name
(RefSeq) RAR related orphan receptor B
KO
K08533
RAR-related orphan receptor beta
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102043473 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gfr03310
]
102043473 (RORB)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102043473 (RORB)
Nuclear receptors [BR:
gfr03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
102043473 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102043473
NCBI-ProteinID:
XP_005423476
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Position
Un
AA seq
470 aa
AA seq
DB search
MCDIQTNVKLNATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYSSSISNGLNNLNSETGSTYANGHVIDLPKSEGYYNVDSAQPSPDQSG
LDMTGIKQIKQEPIYDLTSVPNLFTYSSFNSGQLAPGISMSEIDRIAQNIIKSHLETCQY
TMEELHQLAWQTHTYEEIKVYQSKTREALWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNL
CSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDEETLTKL
IAKIPTITALCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDSTTGCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatattcaaaccaatgtaaaacttaatgcaactgcacaaattgaagtgatacca
tgcaaaatttgtggtgataaatcctctggaatacactatggagtcatcacatgtgaaggc
tgcaagggattctttcggaggagtcagcagaacaatgcatcctattcctgtccaagacag
agaaactgtttaattgacagaaccaacagaaatcgctgccagcactgccgactgcagaaa
tgtcttgccctgggaatgtctcgagatgctgtgaaatttggaagaatgtccaaaaagcag
agggatagcttgtatgctgaagtgcagaagcaccagcagcgactgcaggagcagcggcag
cagcagagtggtgaggcagaagctctggccagggtttacagcagcagcatcagcaatggc
ttgaacaatctgaatagcgaaactggcagcacctacgccaacgggcacgtcatcgacctg
cccaagtctgagggctattacaacgtggattctgcccagccctccccagaccagtctggg
ttagacatgactggaatcaaacagataaagcaggaacctatctatgacctcacctctgta
ccaaacttgtttacctatagttctttcaacagcgggcagttagctccagggatatccatg
agcgaaatcgatcgaattgcacagaatatcattaagtctcatttggagacatgtcaatat
acaatggaggaattacatcagctagcgtggcagacccacacatatgaagaaataaaggtt
taccagagcaagacaagagaagctctgtggcagcagtgtgccattcagatcacccatgct
atccagtatgtggtggagtttgcaaagcgcataacaggcttcatggagctctgccagaat
gaccaaattctccttcttaagtcaggctgcttggaagtggttttggtgagaatgtgccgt
gccttcaacccacttaacaatactgttctgtttgaaggaaagtatggagggatgcaaatg
tttaaagctttgggttctgatgatctggtaaatgaagcatttgactttgcaaagaattta
tgttccttacagctgactgaggaggagattgccttgttttcatctgctgttctgatatca
ccagatcgagcctggttaatagagccaaggaaggtccagaagcttcaggaaaagatttac
tttgcacttcaacatgttattcagaagaaccacctcgatgaggagacattgacaaagtta
atagccaagataccaacaattactgcactttgcaacttgcatggagagaaactgcaggta
tttaagcaatctcatccagacatagtgaacacactgtttcctccattatacaaggagctt
ttcaatccagactcaaccactggctgcaagtga
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