Geospiza fortis (medium ground-finch): 102044369
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Entry
102044369 CDS
T03755
Symbol
ARHGEF12
Name
(RefSeq) Rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04270
Vascular smooth muscle contraction
gfr04625
C-type lectin receptor signaling pathway
gfr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102044369 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102044369 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
102044369 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102044369 (ARHGEF12)
Membrane trafficking [BR:
gfr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102044369 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
PDZ_6
PDZ
Motif
Other DBs
NCBI-GeneID:
102044369
NCBI-ProteinID:
XP_014166359
UniProt:
A0A6I9ZAJ9
LinkDB
All DBs
Position
Un
AA seq
1438 aa
AA seq
DB search
MRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSDVDL
AAFGHMSPIMASPHSPGTSGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQVL
QEEYSRTPSTRLLKEIQEAKKHIPQLQEQLSKATGCTQDGVLSSRSVSESLQISEGEAES
GDSGSKLDFSGDSPSRPNSDIADSPRSGLKERIYPDESPEKAELQDTDSQCSVGSPLSRV
GTQIIGAEDDDFDTEQEQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLY
TDLYKQTNSKETRRVFLEFYQFFLDRAANLKVPVPEEISLELDRRRPELLPEELHRQFIQ
TMQDKVCPEVQRNLEDFRQKRSMGLTLAEGELSRLDAERLRDRNAVEKERSCAEQILAKI
EEVLMTSQPLEEDKSSTMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEK
EGEEKGKRRGFPNILGPPRRPSRHDSSAIGRAMEMQKPRHPKHSPTASSVSPEPPESSKT
RQSGSSSDGTDAPYAPANPMSPLAMGPFASPEGSKDSDTGVKQPGEAPPASESMDGTPRT
PNNTFEFPSPLENLQEEEGEAERMVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDMDPP
NWQQLVSREVLMGLKPYEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILSSSD
KRKIFSNLEDILGLHVALNDQMKSVRKRNETSVIGQIGEDLLSWFSGAAEEKLKLATATF
CSNQPFALEVIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNI
AKYTELPEEKEKVKKAADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMM
DEFRNLDLTKRKMLHEGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILA
STADSKHTFSPIIKLNTVLVRQVATDNKAFFVISMSATGAHIYELVAQTVSEKNVWQDLI
AQMAGTVKMGSSRRVIPLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPL
ILNPQSSSPIMSEKAKVEGLLGAEGQFEKVQQAELALKDSSGCSSASVPEGQWARDALRN
LGLLKQLLVQQLGLAEKGTLEDRQRPPRFRNVSQEGQTESGAELQQQIPNSESKFQQAAE
DRALGRTGEERHGARTAAQCPASGDALQLLGTEPPARGALPMDSTNLEGSSSELEGLGAE
ESGEHFFDAREAHSDENPGESGELLDRKEEEEEEEEEEEEVQIRISGNYLILDGYGSVQE
SSTDEEVSALVLQCTSHRQPPLGCPQQQQQQPLSPRDTQCDRDSSPFPEELRWAGLEEPC
PFLGSPQLPLETRVQLMQYIHNIQDALEKLKEVEEDYSVLRRQGLAGSASTGEHSDKS
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctggagtgcagacaggtgatagaattatcaaggtgaacgggactctggtaacg
cactcgaaccatttggaggtggtcaagctgatcaagtcgggttcctatgtagctctcact
gtccaggggcgccctccagggtcgccccagatccccctggcggattctgacgtggacctg
gcagcttttgggcatatgtctcccatcatggcatccccccactcgcctggcacgtcaggg
aatgcagaaaggatcaccagcccagtgctcatgggggaggagaataacattgtccacaac
cagaaggtggagattctgaggaagatgctccagaaggagcaggagaggctgcaggtcctg
caggaggagtacagccggactccctccacccgcctgctcaaggagatccaggaggcaaag
aaacacattcctcagctgcaggagcagctctccaaggccacgggctgcactcaggatgga
gtcctgtcctccaggtctgtgtcagagtcgctgcagatcagcgagggggaggcagagagt
ggggacagtggcagcaaactggatttcagtggtgacagcccctccagacccaacagtgac
attgctgatagccctcgcagtggcctgaaggagagaatttatccagatgagagcccagaa
aaggctgagcttcaagacactgactcccagtgcagcgtgggcagtcccctgtcccgagtg
gggactcagatcatcggagcagaggatgatgattttgacactgagcaggagcagatcaat
gggcagtgcagctgcttccagaacatcgagctcctgaaatcccgcccggctcacctggct
gtgctcctgcaccacgtggtgtcccagtttgatcctgcagcgctgctgtgctacctttac
acagacctgtacaaacagaccaactccaaagagacccggcgtgttttcctggagttttac
cagtttttcctggacagagctgcaaacctgaaagtcccagttccagaggaaatctccttg
gaattagacaggaggaggccagagctcctccctgaagagctgcaccgccagttcatccaa
accatgcaggataaagtgtgtccagaggtccagaggaacctggaagatttcaggcagaag
aggagcatggggctgaccctggccgagggagagctgagcaggctggacgcagagcggctc
cgcgaccgcaacgccgtggagaaggagaggagctgtgcagagcagatcctggccaaaatc
gaggaggtcctgatgacatctcagcctctggaggaagacaagagctccacgatgcaatat
gtgatcctcacctacatgaaacacctgggagtgaaagtgaaggagcctcggaacctggag
cagaagcggggcaggattgggttcctgccaaagatcaagcaaagcatcaagaaggagaaa
gaaggagaggagaaagggaagaggagaggcttccccaacattctgggtcccccaaggaga
ccgagccgacacgacagcagtgcaattggcagggccatggagatgcagaagcccaggcac
cccaagcactcacccacagcctcttctgtgagcccagagccccctgagtccagcaagacg
cgccagagtggctcctccagcgatggcacagatgccccctacgcccctgccaaccccatg
tcccccctggcaatggggccctttgcctctccagagggcagcaaggacagtgacacaggt
gtgaagcagcctggggaagccccacctgccagtgagtccatggatggcaccccccgcacc
cccaacaacacctttgagttcccatctcctctggaaaacctgcaggaggaggagggagag
gctgagaggatggttgacatgggaacaccgaagccttttcgcaagatggacagtgttggc
tttgcagatgtgcagagtgaggatgagctctatgactttgacatggacatggaccctccc
aactggcagcagcttgtgagcagggaggtgctgatggggctcaaaccctacgaaatcaaa
cgtcaggaagtgataaatgagctgttctacacggagcgagcccacgtgcgcacgctgaag
gtcctgcacaacgtcttctaccagagggtcaccagggagggcatcctcagctccagcgac
aagaggaaaatcttctccaacctcgaggacatccttgggctgcacgttgcactgaacgat
cagatgaaatctgtccggaaaagaaacgagacttctgtcattggccaaattggggaagat
ttgctctcctggtttagtggagcagcagaggagaagctgaaacttgccactgccaccttc
tgcagcaaccagcccttcgctctcgaggtcatcaagtcccgccagaagaaggactcgcgc
ttccagaccttcgtgcaggatgctgagagcaatcccctgtgccggcggctgcagctgaag
gatatcatccccacagagatgcagaggttgactaaatacccccttctgctggataacatt
gctaaatacacagagctgcctgaggagaaggagaaagtcaagaaagcagcagatcactgt
cgccagatcctcaaccacgtgaaccaggctgtcaaagagtcagagaacaagcagcacctg
gaggattatcagcggagactcgacctctcctacttgaagcagtccgaggatcccatgatg
gatgagttcaggaacctggatctaacaaagagaaaaatgcttcacgaagggcccttgacc
tggaaggtgaatcgtgacaaaaccatcgatctgtacactctgctgctggaggacatcctg
gtgctgctgcagaaacaagatgacaaactggtgctgaagtgccacagcaagatcctggca
tccacagctgacagcaaacacaccttcagccccatcatcaaactcaacactgtgctggtt
cgccaggtggccacagataacaaagctttcttcgtcatctccatgtcggcgacgggggct
cacatctacgagctggtggcacagactgtctcagagaagaatgtctggcaggaccttata
gctcagatggcaggaactgtgaagatggggagcagcagaagagtgatcccactgcctcag
tcaggccctggcgaagaggagcgtgaggaagaggagcagcagaagctcaaggagcagcat
gacattcctgccagcagcctgcagagcccagataaagatttgggcctggagtctcccttg
atactgaaccctcagtcctcctcgcccatcatgtcagagaaggccaaggtggaagggctg
ctgggggctgaggggcagtttgagaaggtgcagcaggcagagctggcactgaaggactcc
tctggctgcagctcagcctcggtgcccgaggggcagtgggcacgggatgccctgaggaac
ttggggctgctgaagcagctcttggtgcagcagctgggcctggctgagaaggggaccctg
gaggacagacagcgcccgcccaggttcaggaacgtgtcccaggaaggccagacagagagc
ggcgccgagctgcagcagcaaattccaaattctgagagcaaattccagcaggctgcagag
gacagagcccttggcagaactggggaggagaggcacggcgcccggactgcagcgcagtgc
ccggcctcgggggatgccctgcagctgctgggcactgagccccctgccaggggcgctttg
cccatggacagcacgaacctggagggctccagctcggagctggaggggctgggggctgag
gagagcggggagcatttctttgatgctcgggaagctcacagcgacgagaaccccggcgag
agcggcgagctgctggacaggaaggaggaggaagaggaagaggaggaggaggaggaagag
gtgcaaattcggatctcaggaaattatttgatcctcgatggatacggatcggtgcaggag
agctccacggacgaggaggtgtcagccctggtcctgcagtgcacctcgcacaggcagcct
cccctgggctgtccccagcagcagcagcagcagcccctgtcccccagggacacccagtgt
gacagggacagctcgcccttccccgaggagctgcgctgggcagggctggaggagccctgt
cccttcctgggcagcccccagctccctctggaaacccgagtgcagctcatgcagtacatc
cacaacatccaggatgccctggagaagctaaaggaggtggaggaggattacagcgttctg
cggcgccaggggctggctggctcagcctccacgggagagcactcagacaaaagctag
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