Geospiza fortis (medium ground-finch): 102044996
Help
Entry
102044996 CDS
T03755
Symbol
DDX23
Name
(RefSeq) DEAD-box helicase 23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102044996 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102044996 (DDX23)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102044996 (DDX23)
Spliceosome [BR:
gfr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102044996 (DDX23)
Complex C
U5 SnRNP specific factors
102044996 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
102044996
NCBI-ProteinID:
XP_005430196
UniProt:
A0A6I9HV70
LinkDB
All DBs
Position
Un
AA seq
813 aa
AA seq
DB search
MAGEVADKKDRDASPVKEERKRSRSPERDRERDRERKGSPPAKERKRHRSRERRRSRSRS
RSRSKSTERDRRHKERDRERGKKERDRDKDGHRRDKDRKRSSLSPGRGKDSKSRKDREAR
KAEEEEENALKKEKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALRRRQQEVEER
QRLLEEERKKRKQCQEMGRKMLEDPQERERRERRERMERETNGTEDEEGRQKIREEKDKS
KELHAIKERYLGGVKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFI
AGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDE
MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI
GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQI
EEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCT
YVVLDEADRMIDMGFEPDVQKILEYMPVTNQKPDTDEAEDPEKMLANFESGKHKYRQTVM
FTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFD
PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVA
GRGIDIHDVSMVVNYDMAKNIEDYIHRIGRTGRXGVAITFLTKEDSTVFYDLKQAILESP
VSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggccggagaagtggcggacaagaaggatcgggatgcatccccggtgaaggaggagagg
aaacgttcccgctccccggaacgggaccgggaacgggaccgggagcgcaagggctccccc
ccggccaaggagcggaagcgccaccgatcccgggagcgccggaggagccgctcccgatcc
cggtcccgctccaagtccacagagagggatcggcggcacaaggagcgggaccgggagcgc
ggcaagaaggagcgggacagggacaaggatgggcaccggagggacaaggaccgtaagcgg
tccagtttgtccccgggcaggggcaaagactccaagtctcggaaggatcgggaggcgcgg
aaagcagaggaagaggaggaaaatgccctgaagaaggagaaggcacagccgctgtccttg
gaggagctgctggcaaagaagaaggcagaagaggaggcagaagccaagcccaagttcctg
tccaaggcggagcgggaggccgaggccctgcggcggcggcagcaggaggtggaggagcgg
cagcggctgctggaggaggagaggaagaagaggaaacaatgccaggagatgggcaggaag
atgctggaagaccctcaggagcgcgagcgccgggagcgccgcgagcgcatggagcgggaa
accaacggcaccgaggatgaggagggcaggcagaagatccgtgaggagaaggacaagagc
aaagagctccacgccatcaaggagcggtacctggggggggtgaagaagcggcggcgcacg
cggcacctcaacgaccgcaagttcgtgttcgagtgggacgcatcagaggacacctccatc
gactacaaccccctgtacaaggagaggcaccaggtgcagctgctgggccgcggcttcatc
gccggcatcgacctgaagcagcagaaacgggagcagtcgcggttctatggggacctgatg
gagaagaggaggacgctggaggagaaggagcaggaggaggcgcggctgcggaagctgcgc
aagaaggaggccaagcagcgctgggatgacaggcactggtcccagaagaagctggacgag
atgacagacagggactggcgcatcttccgtgaggattacagcatcaccaccaaggggggc
aagatcccgaatcccatccgctcctggaaggactcctccctgcctccccacatcctggag
gtcattgacaagtgtggatacaaggagccgaccccgatccagcgccaggccatccccatc
gggctgcagaaccgcgacatcatcggcgtggccgagaccggcagcggcaaaacggcggcg
ttcctgatcccgctgctcgtgtggatcaccaccctgcccaaaatcgaccgcatcgaggaa
tcagaccaggggccctacgccatcatcctggcccccacccgtgagctggcacagcagatt
gaggaggaaaccatcaaatttgggaaacccctgggcatccgcaccgtggccgtgatcggt
ggcatctcccgcgaggaccagggcttccggctccgcatgggctgcgagattgtcattgcc
actcctggtcggctcattgacgtgctggagaaccggtacctggtgctgagccgctgcacc
tacgtggtgctggacgaggccgaccgcatgatcgacatgggcttcgagcccgacgtgcag
aagatcctggagtacatgcctgtcaccaaccagaaacccgacaccgatgaggctgaggac
cctgagaagatgttggccaactttgagtctgggaaacacaagtacagacagactgtcatg
ttcacagccaccatgcccccggcagtggagcgcctggcccgcagttacctgcggcgcccg
gccgtggtctacatcggctccgcgggcaaaccccacgagagggtggagcagaaggtgttc
ctcatgtccgagtccgagaagaggaagaagctgttggccatcctggagcagggcttcgac
ccgcccatcatcatcttcgtcaaccagaagaagggctgcgatgtgctggccaagtccctg
gagaagatggggtacaatgcctgcaccctgcacggtgggaagggccaggagcagagagaa
ttcgccctctccaacctcaaggctggagccaaggacatcctggtggccacggacgtggcc
ggacgtggcatcgacatccacgacgtctccatggtggtcaactacgacatggccaagaac
atcgaggattacatccaccgcatcgggcggacgggccgangcggcgtggccatcaccttc
ctcaccaaggaggactccacggtgttctacgacctcaaacaggccatcctggagagcccc
gtgtcctcgtgcccccccgagctggcaaaccaccccgatgcccagcacaagccaggcacc
atcctcaccaagaagcggcgggaggagaccatctttgcctga
DBGET
integrated database retrieval system
