Geospiza fortis (medium ground-finch): 102045363
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Entry
102045363 CDS
T03755
Symbol
SEC24D
Name
(RefSeq) SEC24 homolog D, COPII coat complex component
KO
K14007
protein transport protein SEC24
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102045363 (SEC24D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102045363 (SEC24D)
Membrane trafficking [BR:
gfr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102045363 (SEC24D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
102045363
NCBI-ProteinID:
XP_005427099
UniProt:
A0A6I9HR77
A0A8N5ETR2
LinkDB
All DBs
Position
Un
AA seq
1034 aa
AA seq
DB search
MSQQGYVAAPPYSQSQPGIGGFGPPSSSIHYGHYGDPNSSYSAPQPGVSKPTVPFGSPAP
VGPPPPGAQQFSQTSFQNGSGTPGQQPHRFQGSSPPTNTGPSYPPYSHQSQAAFPSTTPA
SSPAQLADQINSMQINSYGPGTAPNSGVTPGHPAAFQGPRLLPPSQQQMGLPPAAQLPPP
PANSVNGLGAQPPLPPVARQGGVPGPVPPHPNLQHLPGQPPGPGYHPQQANYGPQMAASQ
LSYPGAFPGGPAQLSGPPQKKLDPDSIPSPIQVIENDKAARGGQVYATNTRGQVPPLVTT
NCVIQDQGHASPRYLRCSTYCFPLTADMARQARIPLAAIIQPFAAVPPNETPLYVVNHGE
TGPIRCNRCKAYMCPFMQFIEGGRRYQCGFCNCINDVPPFFFQHLDHMGRRIDHYERPEL
SLGSYEYVATLDYCRDKKPPKPPAFIFMIDVSYRNIKSGLVKLICDELKTLLDKLPREEQ
EESSAIRVGFVTYNKVLHFFNVKSSLAQPQMMVVTDVAEVFVPLLDGFLVDFEESRSVVT
NLLDQIPELFADTNESETIFAPVIQAGMEALKAAECPGKLFIFHSSLPTAEAPGKLKNRD
DKKLLNTDKEKTLFQPQGNYEALAKDCVANGCCVNLFLFPNQYMDVASMGLVTMYTGGTL
YKYNNFQLESDSPQFLSDLRKDIQKQMGFDATMRVRTSTGFRATDFFGAIYMNNTTDVEM
AAVDCDKAVTVEFKHDDKLNEDTGALIQCAVLYTSMSGQRRIRIHNLGLNCSSQLADVYR
TCETDALINFFAKSAFKAILSQPLKTVRDILMNQTAHMLACYKKNCASPAAVSQLILPDT
MKVLPVYMNCLLKSCVLAGRPEIPTDERAFHRQLVMAMGVADTQLYFYPLLLPIHSLDLK
SDAVPAAVRCSEERLSEGGAFLLANGLSMFLWLGASVSPELIQGLFNVPSFAHISTETTS
LPKLDNPFSKKLKHILEQIQSQKPYTMKLMIVKQREQPEMLFRQFLVEDKNIYGGASYVD
FLVCIHKEISQLLS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacaaggttatgttgcagctcctccatattcccaatcccagccaggaatagga
ggttttggaccacccagttcttcaattcattatggacattatggggaccctaactcttca
tactcagcacctcaaccaggtgtgtccaaaccaactgtgccttttggatctccagctcct
gttgggcctcccccacctggtgcacagcaattcagccagaccagtttccagaatggctct
ggtaccccaggacagcagccacacaggtttcaaggctcttcacctccaactaacacagga
ccttcctatcctccctacagtcatcagtcccaagcagccttcccaagtactacacctgct
tcctctccagcacaacttgctgaccagatcaacagcatgcagataaatagctatggtcct
ggcactgctccgaactctggcgtgactcctgggcacccggcggctttccagggcccgcgg
ctgctgcccccaagccagcagcagatgggtttgcctcctgcagcacagctgcctcctcca
ccagcaaacagtgtcaatggccttggtgctcagccaccattgcctcctgtggccaggcag
ggtggagtccctgggcctgtccctccacatcctaacttgcagcaccttccgggacagcct
ccagggcctggatatcatcctcagcaagcaaactatggtcctcagatggcagcatctcaa
ctgtcctatcctggtgcttttcctggtggtccagcacagctctcgggcccaccacagaag
aagcttgatcctgactctattccaagtccaatccaagtgattgagaatgacaaggctgcc
aggggagggcaggtgtatgccacaaacacgagaggacaggttcctcccctcgtcaccacc
aactgcgtgatccaagaccaaggccatgccagcccgcggtacctgcgctgcagcacctac
tgcttcccgctgacggcagacatggccaggcaggcccgcatccccctggcggccatcatc
cagcccttcgctgctgtccccccgaacgagacccctctttatgtcgtaaaccacggggag
accggccccatccggtgcaaccgctgcaaagcttacatgtgtcccttcatgcagttcatt
gaagggggcaggaggtaccagtgtggcttttgtaactgtataaatgatgtcccgccattc
ttctttcaacacctggaccacatgggccgaaggatagaccactatgagaggcctgagctg
tccctgggatcctatgagtatgtggctactttggattattgcagagacaagaagcctcct
aaaccaccagcttttatcttcatgattgatgtatcatacagaaacataaagagtggcctg
gtgaaactcatatgtgatgaactgaagaccctgctagacaaacttccaagagaagagcaa
gaagaatcctcagcaattcgagttggttttgtcacttataacaaggtcctccacttcttc
aatgtaaaaagcagcttagctcagcctcagatgatggtggtcacggatgtggcagaagtt
tttgttcctttgctggatggcttcctggttgactttgaggaatcccgatcggttgttacc
aacttgttggaccagattccagagttgtttgcagacactaatgagagtgagaccatcttc
gcaccagttatccaggctggcatggaggcactaaaggctgcagaatgtcctgggaaattg
ttcatcttccactcttctctgccaactgcagaagcaccggggaagctgaaaaacagagat
gacaaaaaactgctcaatacagacaaggaaaagaccctcttccagccacagggaaattat
gaggccttagccaaggattgtgtggccaatggctgctgtgtgaatttgttcctcttccca
aatcagtacatggatgtagcctccatgggccttgtcacaatgtacactggtggaacactg
tacaagtacaacaatttccagctcgaaagtgacagcccccagttcttaagtgacctcagg
aaggacatccaaaaacagatgggatttgatgcaacaatgagggttcggacaagtacaggc
ttcagggctacagacttctttggggccatttacatgaacaacaccacggatgtggagatg
gcagcggttgactgtgacaaagcagtgacagtggagttcaaacatgatgacaaactgaat
gaagacactggggcgttaattcagtgcgctgtcctgtacacttcaatgagcgggcagagg
cgaatccgcatacacaaccttggtttgaattgcagctcccagttagctgatgtctacagg
acttgtgagactgatgcacttatcaacttctttgctaagtcagcttttaaagccattctg
agccagcccctgaagacagtcagggacatcctgatgaaccagactgctcacatgctggcc
tgctacaagaagaactgtgccagcccagcagctgtcagccagctgatcctgccagacacg
atgaaggtgctgcccgtgtacatgaactgcctgctgaagagctgtgtgctggctggcagg
cctgaaatccccaccgatgagagggccttccaccgccagctggtcatggccatgggggtg
gctgacacacagctctacttctaccccttgctgctgccaattcacagcctggatctgaag
agtgacgcggtgccagctgccgtgcgctgctccgaggagcgcctctccgagggaggggcc
tttctgctggccaatgggctgagcatgttcctgtggctgggagccagcgtgtccccagag
ctcatccagggccttttcaacgtgccatccttcgcacacatcagcaccgagaccacatcc
ctgcctaagctggacaatccattttctaagaaactgaagcatatcctggagcaaatccag
agccaaaagccctacactatgaagctgatgatagtgaagcagcgggagcagccagagatg
cttttccgccagttcctagtagaagacaagaatatttatggaggagcctcgtatgtggat
ttcctcgtgtgcattcacaaagagatcagccagctgctcagttaa
DBGET
integrated database retrieval system
