Geospiza fortis (medium ground-finch): 102045651
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Entry
102045651 CDS
T03755
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappaB binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102045651 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102045651 (NFRKB)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
102045651 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
102045651
NCBI-ProteinID:
XP_005427943
UniProt:
A0A6I9HQC9
LinkDB
All DBs
Position
Un
AA seq
1366 aa
AA seq
DB search
MCVYTYIHTHIYTHTDIEGPLHSYHLNNHPSNVGSPSFLTSGWMYLGLGFLFFEGFAVVF
QEQEGWRMDSLDHMLTDPLELDGSCTRIMEDCMLGPTRVSLPEDLLEDPEIFFEVVSLST
WQEVLTDEQQEHLKKFLPHFPENNQEHQNKLISALFSGENFRFGNPLHIAQKLFRDGHFN
PEVVKYRQLCYKSQYKRYLSAQQQYFYRLLKQILASRNHLLELARKGGPDMTLRRKHFPT
TYDSEERDRRTHRRYLKILREVKEECGDTALSSDEEDLISWPPRSPARCSSPPVPLRVIP
TLSTLDMKTADKIELGESDLKMMLKKHHEKRKRQPDHPDLVTTDLTLEDIMTRVNGGRKG
SLATLFDLATLKKKVKDKEDKKKKKPKIVKSEVEDLADSLGNADGLPSMSQDFSPLPLSS
VKEEPLEDMKPCLEVNEISSSFFFLLLEILFLEGPAILSVLEDKVLDWQSSHASALNNWF
SFAPNWSELVLPALQYLAGDSRDAPSSFSPFVEFKEKTQQWKLLGSYQDHEKELAALFHL
WLETKDQTFFKENEDSSDAMPLPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFR
MHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAE
ICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEF
ERIHHAQAAAAKAKKALQKPKPPAKMKSSSKEGTVKALPTSTADPSQLSLSDSSMPPTPV
TPMTPTAPALPATPISPPPVSAVSKSVSGAGSEPAKPSQSVLLVSSPAMPQLGTLLSPAQ
SSQAQPGPAPTPRVVSHSSSSGLPQVRVVTAQSSLPTMSQQAPVVTQQQQQPTSVPQIRV
PATTTQTKVLPQAVMTLPVKAQSSPVQVPRAGSSMASQAGITVTGLPAVPSPAVKPVTSS
PGSSAASTSSTTIIQNVAGQNIIKQVAITGQLGVKTQAGSGIPLTATNFRIQGKDVLRLP
PSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAAGSSAGGKGISATLHVTS
NPVQTAESSAKTSTVSPASSSPAGGTVVKVTPDLKTAEPTSSAFRLMPALGMTVADQKSK
AITTVASTEAKPAATIRIVQGLGVIPPKAGQTITVATHAKQVPSSSAASIAGTGHTSLPT
MSATVSKAVAVASGTAGTPITIGTGATAVRQVPVSTTVVSTSQAGKLPARITVPLSVISQ
PVKGKSVVTAPIIKGNIGANISGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQ
GQATQVRIQTVPASHLQQGTVSGSTKAVSTVVVTTAPSPKQTQDQL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtatacatacatacacacccatatatatacacacacagatattgaaggccca
ctccatagctaccatttaaacaaccacccatcaaatgtgggttctccatcattcctcaca
tcaggatggatgtatctgggtttgggatttttgttttttgagggttttgctgtcgttttc
caggagcaggagggctggaggatggattccctggatcacatgctcacagaccccctggag
ctggacggcagttgcacacggattatggaggactgcatgctgggccccacccgggtcagt
ctacctgaggacctcctggaggatcctgagatcttctttgaggttgtcagcttgtcaaca
tggcaggaggtcctgacagatgagcagcaagagcacctaaaaaaattcctgcctcacttc
cctgagaacaaccaagagcatcagaacaaactcatctcagcgctgttcagtggggagaac
tttcggtttgggaacccgctgcacatcgcccagaaactcttccgggatggacacttcaat
cccgaggtggtgaagtaccggcagctctgttacaagtcgcagtacaagcgctacctgagt
gcccagcagcagtacttctacaggctgctcaagcagatcctcgcttcccgcaatcacttg
ctggaattagccaggaaaggaggccctgacatgacactaaggagaaagcacttcccaaca
acatacgactcggaagaacgagacagacggacacatcggcgctacttgaagatcctgagg
gaagtaaaagaggagtgtggagacactgccttgtcttctgatgaagaagatctaatctct
tggcctccacgttctccagcacgttgttcaagtcctccagttcccctgagagtgatcccc
acgttgtcaaccttggacatgaaaactgcagacaagatagaacttggagaaagcgattta
aagatgatgttgaagaagcaccacgagaaacgaaaacgtcagcctgatcacccagatcta
gtcacgacagacctgacccttgaggacatcatgactcgagtgaatggtggcaggaaaggt
tccttagcaaccttatttgacctcgcaaccctcaagaaaaaggtgaaggacaaggaagat
aagaaaaaaaagaagccaaagattgttaaatctgaggtggaagatttggctgactctctt
ggcaatgcagatggactcccatcaatgtctcaggatttttcccccctccctctgtcatct
gtcaaagaggaacctcttgaagatatgaagccatgccttgaagtaaatgaaatatcatcc
agcttctttttccttcttttggagatactgtttctggaaggacctgctattctctctgtg
cttgaagataaagttctcgattggcaatcttctcatgccagtgcactaaataactggttt
tcctttgcccctaattggtctgaattggttttacctgccttgcagtatttggcaggcgat
agcagagatgctccttccagcttctcaccttttgttgaattcaaggagaaaactcagcag
tggaaattgcttggtagttaccaagatcatgagaaggaactggcagcactgtttcatctc
tggttggagaccaaagaccagacttttttcaaagaaaatgaagacagctcggatgccatg
ccactgcccagagtaaggactgactatgtagtccggcctagcacgggagaggagaaacgg
gtgtttcaagagcaagagcgttaccgttacagccagccccacaaagccttcaccttccgg
atgcatggctttgagtcggttgttggtcctgtgaagggagtgtttgacaaggaaacctcc
ttaaacaaagcccgggaacattctctcctgcgctcagacagaccagcatatgtcaccatt
ttatcccttgttcgtgatgctgctgctcgccttcctaatggagagggaactcgagctgaa
atctgtgagctgctcaaagactcccagttcttagctccagatgttacaagtgctcaggtt
aacactgttgttagtggtgctctggaccgattacattatgagaaagatccctgtgtgaaa
tacgatattgggcggaagttgtggatctacctgcaccgggacaggagcgaggaagagttt
gaacgcatccatcatgctcaagctgctgcagcaaaggccaagaaagctcttcagaagcca
aaacctccagctaaaatgaagtcgagtagtaaggagggtactgtgaaagccctccccacc
agcacagcagatcccagtcagctgagcctcagtgactccagcatgccaccaactcctgtg
actcccatgacaccaactgcccctgcattgccagccacacccatctcacctccaccggtg
tctgcagtcagcaagagtgtatctggtgctgggtcagagccagcaaaacccagccagagc
gttctcctagtgtcttctcccgccatgccccagctggggacgttgctgtccccagctcag
agctcacaggcgcagccagggccagcgcccaccccgcgtgtggtcagtcacagcagctcc
tcaggcctgccacaggtccgtgtggtcactgcccaatccagcctcccaactatgtcccag
caagccccagtggtcacccagcagcagcagcagcccacgtcagtgcctcaaatccgtgtt
ccagctacaaccacacaaaccaaagtgctccctcaggctgtgatgactctgcctgtaaaa
gctcaaagtagccctgtgcaggtgccaagagcaggaagctccatggccagccaggcaggt
atcactgtgacggggctgcctgcagtgcctagccctgctgtgaagccagtgaccagctct
ccaggcagttctgctgccagcacctcctccaccactatcattcagaacgtggctggccag
aacatcatcaagcaggtggctattacaggacaactcggtgtaaagacccaggctggaagt
ggcattccactcacagcaaccaattttcggatccaagggaaggatgtgttgcgcctgccc
ccatcctccatcaccacggatgcaaagggacaaacagtgctgcgcatcactccagatatg
atggccaccctggctaagtctcaagtcactactgtcaaactgactcaggacctcttcaca
gcagctgcgggaagcagtgctggtgggaaaggcatctctgcgactttgcacgtgacatcc
aaccctgtccagactgctgagtcttcagccaagacaagcacggtgtctcctgcctcttcc
agcccagccggaggcactgtggttaaagtgactcctgacttaaagactgcagagccaaca
agttctgctttccgcctgatgcctgccctgggcatgactgtggcagatcagaagagcaaa
gccataaccacggtggcatcgacggaggccaagccagctgccactatcagaattgtgcag
gggctgggggtgatcccccccaaagctgggcagaccataacggtagccactcatgctaag
caggtgccctcctcctcggcggcgagcattgctggcacaggccacacctccttacccacc
atgagtgccacagtgtccaaagcagttgctgtggcctcaggaactgcgggaacccccata
accattggtacaggagccacggctgtgcggcaggtgcccgtcagcaccacagtggtatct
acatcccaggcaggcaaacttccagcacggatcacagtacccctgtcagtgatcagccag
ccagtgaagggcaagagcgtggtcactgcccccatcatcaagggcaacatcggcgccaac
atcagtggattaggcagaaatatcattctgactacaatgccagcagggactaaactgatt
gctgggaacaagcctgtgagttttctgactgcacagcaactacagcagctgcagcagcaa
ggccaagccacacaggtgcgaattcaaacagttccagcctcccatctccagcagggaaca
gtctctggctcaactaaagcagtgtccactgtggttgtgacaacagctccatctccaaag
cagactcaggatcagctgtga
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