Gallus gallus (chicken): 107049790
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Entry
107049790 CDS
T01006
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent P/Q-type calcium channel subunit alpha-1A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
gga
Gallus gallus (chicken)
Pathway
gga04010
MAPK signaling pathway
gga04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107049790
04020 Calcium signaling pathway
107049790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gga04040
]
107049790
Ion channels [BR:
gga04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107049790
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
107049790
NCBI-ProteinID:
XP_025001486
CGNC:
72806
LinkDB
All DBs
Position
30:1415846..1450013
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AA seq
1932 aa
AA seq
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MARFGDDHPSRYGAGGGGALGSSMGRVSGGSRAAGGGPGGGGGGGAPPGGQRVYKQSMAQ
RARTMALYNPIPVRQNCLTVNRSLFLFSEDNAVRKYAKRITEWPPFEYMILATIIANCIV
LALEQHLPDDDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDF
VVVLTGILATVGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLF
FAILIFAIIGLEFYMGKFHTTCFDLVTNEIKVEVPCGTDEPARICPNGTKCRKYWEGPNY
GITQFDNILFAVLTVFQCITMEGWTDLLYYSNDASGNTWNWLYFIPLIIIGSFFMLNLVL
GVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDEGEGEPRHP
FDALRRATIKKSKTDLLSPEDAEEQLADIASVGSPFARASLKSAKLENATFFHKRERRMR
FYIRRVVKTQAFYWTVLSLVALNTLCVAIVHYDQPEWLSDFLYYAEFIFLGLFMSEMFIK
MYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYW
ASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDTGTPPTNFDTFPAA
IMTVFQILTGEDWNAVMYDGIKSQGGVKGGMVFSVYFIVLTLFGNYTLLNVFLAIAVDNL
ANAQELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANLSIAVKEQQKNQKGSRSVWEQ
RTSELRKQNLLASREALYGELEPEERWEAAYGRHLRPDAKTHRDRPLVVDPRENRNNNTN
KTRPAEPPTEPRFAPRYADERRRQPRHADXRRPRPDAEPAAVRQPRSREAERDGADGERA
KERRHRGREGRVGSPQTEHRRHRAHRRAAEDGEERRSRHRDGGRAGRGDGDDERGDGERR
RRHRHGAGGGGGCDGDGRRDDRERRHRRRRENHGPAALPALSTTRPIQQDPARLQPPVAE
DIDNMKNNKLATGDPLPVGNHTECPPPPASRRGPPHHAPPPPDDGLVVTNPTAHNDPTAA
LRRAEPKAEPKAEPKAEHTAVEIPPLLPPPPSSALVQMNRNANPEPLPRKEEEEKKEEEG
NGDEENGPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILMVIAMSSIALAAEDPV
QPNAXRNNVLRYFDYVFTGVFTFEMVIKMVDLGLVLHQGAYFRDLWNILDFIVVSGALVA
FAFTGSSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLF
MFIFAVVAVQLFKGKFFYCTDESKEFEKDCRGEYLVYEKNEVKAQRREWKKYDFHYDNVL
WALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFV
ALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNRQSFQYRMWQFVVSPP
FEYTIMAMIALNTIVLMMKFYDASDAYENVLKMFNNVFTSLFSLECLLKIMAFGVLNYFR
DAWNVFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQ
SFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIEEEDDESAITQHNNFRTFFQALMLLFRS
ATGEAWHEIMLSCLSGKPCDENSGIKEDECGNEFAYFYFVSFIFLCSFLMLNLFVAVIMD
NFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRLTLMDMYAMLRNMSPPLGLGEKCPPR
VAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDAELRKEMVAIWP
NLSPKNLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMALHAPARRNGQLRPP
ASQSEPRPSPVL
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggtgacgaccacccatcccgctatggggcgggcggggggggggcgctg
ggctcctcaatgggccgagtttcggggggttcccgagcggccggggggggtcccggcggg
gggggaggcggcggcgccccccccggagggcagcgggtctataagcagtcaatggcgcag
cgcgcccgcacgatggcgctctacaaccccatccccgtccggcagaactgcctcaccgtc
aaccgctctctgttcctcttcagcgaagacaacgcggtgaggaaatacgccaaaaggatc
accgagtggcctccgtttgaatacatgattttagccaccatcatcgccaactgcatcgtg
ttggccctggagcagcacctccccgacgacgacaaaacccccatgtccgagcgcctggat
gacacggagccgtatttcatcggcatcttctgcttcgaggcggggatcaaaatcatcgcg
ctgggattcgccttccacaaaggctcctatctgcgcaacggctggaatgtcatggacttc
gtggtggtcctgaccggcatcctggccaccgtgggctcacagttcgacctgcggacgctg
cgggcggtgcgggtgctgcggcccctcaagttggtgtcggggatcccaagcctgcaggtg
gtgctgaagtccatcatgaaggcgatgattccgctgctgcagatcggactgctgctcttc
ttcgccatcctcatcttcgccatcatcggcctggagttctacatgggcaaattccacacc
acctgcttcgacctggtcaccaatgagatcaaagtggaggtgccgtgcgggacggacgaa
ccggcgcggatctgccccaacggcaccaaatgccgcaaatactgggagggccccaattac
ggcatcacgcagttcgacaacatcctcttcgccgtcctcaccgtcttccagtgcatcacc
atggaagggtggaccgacctcctctactatagcaacgatgcctcagggaacacttggaat
tggctgtacttcatccccctcatcatcatcggctccttttttatgctcaacctcgtgctg
ggggtgctgtccggggagtttgccaaagaaagagagcgggtggagaaccgccgcgccttc
ctgaagctgcggaggcagcagcagatcgagagggagctcaatgggtacatggagtggatc
tccaaagcagaagaagtcatcctggcggaggatgagggggaaggcgaaccccggcacccc
tttgatgctctgcgaagggccaccatcaagaagagcaaaacggatctgctgagcccggag
gacgctgaggagcagttggccgacatcgcctccgtgggctcccccttcgcccgcgccagc
ctcaaaagtgccaagctggagaacgccacgttcttccacaagcgggagaggaggatgcgc
ttctacatccgccgcgtggtcaaaactcaggccttctactggaccgtgctcagcctggtc
gccctcaacacgctctgcgtcgccatcgtgcactacgaccaacccgagtggctctccgac
ttcctctactatgcagaattcattttcctgggacttttcatgtccgaaatgtttataaaa
atgtacgggctgggaacgcggccttatttccattcctccttcaactgcttcgactgcgcc
gttatcatcggaagcatctttgaggtgatttgggccgtggtgaagccgggaacgtccttt
gggatcagcgtgctgcgagctctcaggttactgcgcatcttcaaggtcaccaagtactgg
gcttccctgcggaacctggtggtctccctcctcaactccatgaagtccatcatcagcctc
ctcttcctcctcttcctcttcatcgtcgtcttcgcccttttggggatgcagctcttcggg
gggcagttcaattttgacaccgggacccctcccaccaacttcgacactttcccagcagca
ataatgacggtgtttcagatcctgaccggggaggactggaacgcggtgatgtacgacggg
atcaaatctcagggcggcgtcaaaggggggatggtgttctccgtctacttcatcgtcctc
accctctttgggaactataccctcctgaacgtcttcttggccatcgcggtggacaatttg
gccaacgctcaggagctgaccaaggacgagcaggaggaggaggaggcggccaaccagaag
ctggcgctgcagaaggccaaggaggtggcagaagtcagcccgctgtcggccgccaatttg
tccatcgctgtgaaggagcagcagaagaaccagaagggctcccgctcggtgtgggagcag
cggacgagcgaactgcggaagcagaacctcctggcgagccgggaggcgctctacggcgaa
ttggagccggaggagcgctgggaagccgcctacggccgccacctccggcccgacgcgaag
acccaccgggaccgcccgctcgtggtggacccgcgggagaaccgcaacaacaacaccaac
aaaacgcggcccgcggagccgccgacggagccgcgcttcgctccgcgctacgccgacgag
cggcgccggcagccccgccacgccgacncccgccgcccccgccccgacgcggagcccgcg
gccgtccggcagccccggagccgggaggcggagcgcgacggcgcggacggggagcgggcg
aaggagcggaggcaccgcggccgggaggggcgcgtcgggtcgccgcaaacggagcaccgg
aggcaccgcgcgcaccgccgggcggcggaggacggcgaggagcggcgctcgcggcaccgg
gacggggggcgcgcggggaggggcgacggagacgacgagcgcggagacggagagaggcgg
aggcggcaccggcacggagcggggggcggagggggctgcgacggagacggccgccgggac
gacagggagaggaggcaccgcaggaggcgggagaaccacggccccgcggcgctgcccgcg
ctgtccaccacgcgccccatccagcaggacccggcccggctgcagccgcccgtggcggag
gacatcgacaacatgaagaacaacaaattggccaccggggatcccctccccgtggggaac
cacaccgagtgccccccccccccggcctcccgccgcgggcccccacatcacgcgcccccc
ccccccgacgacggcctcgtggtcaccaaccccaccgctcacaacgaccccacggcggcg
ctgcgcagagcggagcccaaagcggagcccaaagcggagcccaaagcggagcacacagcc
gtggagatccccccgctgctcccaccgccccccagcagcgccctcgtgcaaatgaacaga
aacgccaaccctgagccgctgcccaggaaggaggaggaggagaagaaagaggaggaaggc
aacggggacgaggagaacggccccaaacccatggtgccctacagctccatgttcatcctt
tccaccaccaacccgtttcgccgcctgtgccattacatcgtcaacctgcgctacttcgag
atgtgcatcctgatggtcatcgccatgagcagcatcgcgctggcagccgaggaccccgtg
cagcccaacgccncccgcaacaacgtcctgcgctacttcgattacgtcttcacgggcgtc
ttcaccttcgagatggtgataaagatggtggatttggggctggtccttcaccaaggtgcc
tatttccgcgacctgtggaacattctggacttcattgtggtcagcggagcgttggtggcc
ttcgccttcacgggcagcagcaaagggaaggacatcaacaccatcaaatccctgcgtgtc
ctccgcgtcctccggcccctgaagaccatcaagaggttacccaaactgaaggctgtgttt
gactgcgtggtcaactcgttgaagaacgtcctcaacatcctcatcgtctacatgctcttc
atgttcatcttcgccgtggtggccgttcagctcttcaagggcaaattcttctactgcacc
gacgagtccaaggagttcgagaaggactgcaggggggagtacctggtctacgagaagaac
gaggtgaaggcgcagaggagggagtggaagaaatacgacttccattacgacaacgtgctc
tgggcgctgctcaccctcttcaccgtctccaccggggaggggtggccgcaggtcctgaag
cactcggtggacgccacctatgagaaccagggccccagccccggctaccgcatggagatg
tccatcttctacgtggtttacttcgtcgtcttccccttcttcttcgtcaacatcttcgtg
gcgttgatcatcatcaccttccaggagcagggggacaaaatgatggaggagtacagcctg
gagaagaacgagagggcgtgcatcgactttgccatcagcgccaagccgctgacccggcac
atgccgcagaaccgccagagcttccagtaccgcatgtggcagttcgtggtgtcgccgccc
ttcgagtacaccatcatggccatgatcgccctcaacaccatcgtcctcatgatgaagttc
tacgacgcctccgacgcctacgagaacgtcctcaagatgttcaacaacgtcttcacgtcc
ctcttctccctcgagtgtctcctgaagattatggccttcggggtgctgaattacttccgc
gacgcctggaatgtcttcgacttcgtgacggtgctgggcagcatcacagacatcctggtg
acggagttcgggaacaacttcatcaacctcagcttcctgcggctgttccgcgccgcgcgg
ctcatcaaactgctgcgccagggttacaccatccgcatcctgctgtggaccttcgtgcag
tcctttaaggctctgccctacgtctgcctgctcatcgccatgctcttcttcatctacgcc
atcatcggcatgcaggtttttgggaacatcggcatcgaggaggaggacgacgagtcggcc
atcactcagcacaacaacttccgcaccttcttccaggccctcatgctgctcttcaggagc
gccacgggggaggcgtggcatgagatcatgctgtcgtgtctgagcggcaaaccctgcgat
gagaactcgggcatcaaagaggacgaatgcggcaatgagttcgcctacttctacttcgtc
tccttcatcttcctctgctccttcctgatgctgaacctcttcgtggcggtcatcatggac
aactttgagtacctgacgcgcgactcctccatcctgggcccgcaccacctggatgaatac
gtccgcgtttgggccgaatacgaccccgccgcctggggccgcctgactctcatggacatg
tatgcaatgctgagaaatatgtccccgcccctgggtttgggcgagaaatgtcctccccga
gtggcctataagcggctgctgcggatggacctcccggtggccgacgataacaccgtgcat
ttcaactccacgctgatggcgctcatccgcaccgcgctggacatcaaaattgccaaagga
ggagccgataagcagcagatggacgcggagctgcgcaaggagatggtcgccatttggccc
aacctgtcccccaagaacctggacctcctcgtcaccccccataagtccacggatctgacg
gtggggaagatctacgccgccatgatgatcatggagtactacaggcagagcaaagccaag
aagctgcaggccatggcactgcatgcgcccgcacgacgcaacgggcagctccgtccaccc
gcctcccagtccgagccgcggccctcgccggtcctctag
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